RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 MINDY4BA8MYZ0 360 aa13.2□□□□□ -0.3
PRPF40A-202ENST00000410080 CLEC11AQ9Y240 323 aa13.2□□□□□ -0.3
PRPF40A-202ENST00000410080 NASPP49321 788 aaPredicted RBP13.2□□□□□ -0.3
PRPF40A-202ENST00000410080 NOB1Q9ULX3 412 aaKnown RBP13.2□□□□□ -0.3
PRPF40A-202ENST00000410080 IDH1O75874 414 aaKnown RBP13.2□□□□□ -0.3
PRPF40A-202ENST00000410080 HDGFL1Q5TGJ6 251 aa13.2□□□□□ -0.3
PRPF40A-202ENST00000410080 TSR2Q969E8 191 aaKnown RBP13.2□□□□□ -0.3
PRPF40A-202ENST00000410080 CCDC113Q9H0I3 377 aa13.2□□□□□ -0.3
PRPF40A-202ENST00000410080 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.19□□□□□ -0.3
PRPF40A-202ENST00000410080 JMYQ8N9B5 988 aa13.19□□□□□ -0.3
PRPF40A-202ENST00000410080 CTNNBL1Q8WYA6 563 aaPredicted RBP13.19□□□□□ -0.3
PRPF40A-202ENST00000410080 DACH1Q9UI36 760 aa13.19□□□□□ -0.3
PRPF40A-202ENST00000410080 CDC45O75419 566 aa13.19□□□□□ -0.3
PRPF40A-202ENST00000410080 GOPCQ9HD26 462 aa13.19□□□□□ -0.3
PRPF40A-202ENST00000410080 DZIP1Q86YF9 867 aaKnown RBP13.19□□□□□ -0.3
PRPF40A-202ENST00000410080 CCDC7Q96M83 1385 aa13.19□□□□□ -0.3
PRPF40A-202ENST00000410080 TXLNBQ8N3L3 684 aa13.19□□□□□ -0.3
PRPF40A-202ENST00000410080 RSPH6AQ9H0K4 717 aa13.19□□□□□ -0.3
PRPF40A-202ENST00000410080 PABPN1LA6NDY0 278 aaKnown RBP13.19□□□□□ -0.3
PRPF40A-202ENST00000410080 CCP110O43303 1012 aa13.19□□□□□ -0.3
PRPF40A-202ENST00000410080 PPP1R12BO60237 982 aaPredicted RBP13.19□□□□□ -0.3
PRPF40A-202ENST00000410080 KIAA0754O94854 1291 aa13.19□□□□□ -0.3
PRPF40A-202ENST00000410080 NEK4P51957 841 aa13.18□□□□□ -0.3
PRPF40A-202ENST00000410080 RRS1Q15050 365 aaKnown RBP13.18□□□□□ -0.3
PRPF40A-202ENST00000410080 SULT6B1Q6IMI4 303 aa13.18□□□□□ -0.3
PRPF40A-202ENST00000410080 SYNJ2O15056 1496 aa13.18□□□□□ -0.3
PRPF40A-202ENST00000410080 LETM1O95202 739 aaPredicted RBP13.18□□□□□ -0.3
PRPF40A-202ENST00000410080 GOLGA6L7A0A1B0GV03 622 aa13.18□□□□□ -0.3
PRPF40A-202ENST00000410080 MACROD2A1Z1Q3 448 aa13.18□□□□□ -0.3
PRPF40A-202ENST00000410080 STARD3NLO95772 234 aa13.18□□□□□ -0.3
PRPF40A-202ENST00000410080 TNNT1P13805 278 aa13.18□□□□□ -0.3
PRPF40A-202ENST00000410080 LRRC9Q6ZRR7 1453 aa13.18□□□□□ -0.3
PRPF40A-202ENST00000410080 CABP1Q9NZU7 370 aa13.18□□□□□ -0.3
PRPF40A-202ENST00000410080 AACSQ86V21 672 aa13.18□□□□□ -0.3
PRPF40A-202ENST00000410080 SLC26A8Q96RN1 970 aa13.18□□□□□ -0.3
PRPF40A-202ENST00000410080 IGF1RP08069 1367 aa13.18□□□□□ -0.3
PRPF40A-202ENST00000410080 FEZ1Q99689 392 aa13.17□□□□□ -0.3
PRPF40A-202ENST00000410080 CCDC39Q9UFE4 941 aa13.17□□□□□ -0.3
PRPF40A-202ENST00000410080 PDCP20941 246 aa13.17□□□□□ -0.3
PRPF40A-202ENST00000410080 ZNF530Q6P9A1 599 aaPredicted RBP13.17□□□□□ -0.3
PRPF40A-202ENST00000410080 CAVIN4Q5BKX8 364 aa13.17□□□□□ -0.3
PRPF40A-202ENST00000410080 STAMBPO95630 424 aa13.17□□□□□ -0.3
PRPF40A-202ENST00000410080 CUL5Q93034 780 aa13.17□□□□□ -0.3
PRPF40A-202ENST00000410080 SLC4A2P04920 1241 aa13.17□□□□□ -0.3
PRPF40A-202ENST00000410080 GNAI3P08754 354 aa13.17□□□□□ -0.3
PRPF40A-202ENST00000410080 RABEP1Q15276 862 aa13.17□□□□□ -0.3
PRPF40A-202ENST00000410080 KIF21BO75037 1637 aa13.17□□□□□ -0.3
PRPF40A-202ENST00000410080 EXOSC9Q06265 439 aaKnown RBP13.17□□□□□ -0.3
PRPF40A-202ENST00000410080 TSPY26PQ9H489 355 aa13.17□□□□□ -0.3
PRPF40A-202ENST00000410080 NESP48681 1621 aa13.17□□□□□ -0.3
PRPF40A-202ENST00000410080 ZNF397Q8NF99 534 aaPredicted RBP13.16□□□□□ -0.3
PRPF40A-202ENST00000410080 EPB41L2O43491 1005 aaKnown RBP13.16□□□□□ -0.3
PRPF40A-202ENST00000410080 TWISTNBQ3B726 338 aaPredicted RBP13.16□□□□□ -0.3
PRPF40A-202ENST00000410080 EIF5P55010 431 aaKnown RBP13.16□□□□□ -0.3
PRPF40A-202ENST00000410080 CDCA7LQ96GN5 454 aa13.16□□□□□ -0.3
PRPF40A-202ENST00000410080 TNMDQ9H2S6 317 aa13.16□□□□□ -0.3
PRPF40A-202ENST00000410080 ZNF287Q9HBT7 754 aa13.16□□□□□ -0.3
PRPF40A-202ENST00000410080 METTL24Q5JXM2 366 aa13.16□□□□□ -0.3
PRPF40A-202ENST00000410080 DYDC1Q8WWB3 177 aa13.16□□□□□ -0.3
PRPF40A-202ENST00000410080 ZC3H6P61129 1189 aaKnown RBP13.16□□□□□ -0.3
PRPF40A-202ENST00000410080 PTCD1O75127 700 aaKnown RBP13.16□□□□□ -0.3
PRPF40A-202ENST00000410080 TCP11L2Q8N4U5 519 aa13.16□□□□□ -0.3
PRPF40A-202ENST00000410080 NGLY1Q96IV0 654 aa13.16□□□□□ -0.3
PRPF40A-202ENST00000410080 CYP46A1Q9Y6A2 500 aa13.16□□□□□ -0.3
PRPF40A-202ENST00000410080 HMGB2P26583 209 aaKnown RBP13.15□□□□□ -0.3
PRPF40A-202ENST00000410080 MPRIPQ6WCQ1 1025 aa13.15□□□□□ -0.3
PRPF40A-202ENST00000410080 AIDAQ96BJ3 306 aa13.15□□□□□ -0.3
PRPF40A-202ENST00000410080 CEP63Q96MT8 703 aa13.15□□□□□ -0.3
PRPF40A-202ENST00000410080 DDX23Q9BUQ8 820 aaKnown RBP13.15□□□□□ -0.3
PRPF40A-202ENST00000410080 ZNF622Q969S3 477 aaKnown RBP eCLIP13.15□□□□□ -0.31e-8■■□□□ 14.1
PRPF40A-202ENST00000410080 WWC3Q9ULE0 1092 aa13.15□□□□□ -0.3
PRPF40A-202ENST00000410080 SAMM50Q9Y512 469 aa13.15□□□□□ -0.3
PRPF40A-202ENST00000410080 FAM43AQ8N2R8 423 aa13.15□□□□□ -0.3
PRPF40A-202ENST00000410080 PUF60Q9UHX1 559 aaKnown RBP13.15□□□□□ -0.3
PRPF40A-202ENST00000410080 CTNNA2P26232 953 aa13.15□□□□□ -0.3
PRPF40A-202ENST00000410080 LRSAM1Q6UWE0 723 aa13.15□□□□□ -0.3
PRPF40A-202ENST00000410080 CFTRP13569 1480 aa13.15□□□□□ -0.31
PRPF40A-202ENST00000410080 RAPGEF3O95398 923 aa13.15□□□□□ -0.31
PRPF40A-202ENST00000410080 SSX2IPQ9Y2D8 614 aa13.15□□□□□ -0.31
PRPF40A-202ENST00000410080 CDKL5O76039 1030 aa13.14□□□□□ -0.31
PRPF40A-202ENST00000410080 NBPF1Q3BBV0 1214 aa13.14□□□□□ -0.31
PRPF40A-202ENST00000410080 CWC27Q6UX04 472 aaKnown RBP13.14□□□□□ -0.31
PRPF40A-202ENST00000410080 PRPF40AO75400 957 aaKnown RBP13.14□□□□□ -0.31
PRPF40A-202ENST00000410080 INCENPQ9NQS7 918 aa13.14□□□□□ -0.31
PRPF40A-202ENST00000410080 TMOD3Q9NYL9 352 aa13.14□□□□□ -0.31
PRPF40A-202ENST00000410080 SCAPERQ9BY12 1400 aa13.14□□□□□ -0.31
PRPF40A-202ENST00000410080 CETN2P41208 172 aa13.14□□□□□ -0.31
PRPF40A-202ENST00000410080 UBE4AQ14139 1066 aa13.14□□□□□ -0.31
PRPF40A-202ENST00000410080 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.14□□□□□ -0.31
PRPF40A-202ENST00000410080 ANKRD1Q15327 319 aa13.14□□□□□ -0.31
PRPF40A-202ENST00000410080 LRRCC1Q9C099 1032 aa13.14□□□□□ -0.31
PRPF40A-202ENST00000410080 PPP2R1AP30153 589 aa13.14□□□□□ -0.31
PRPF40A-202ENST00000410080 ARL1P40616 181 aaPredicted RBP13.14□□□□□ -0.31
PRPF40A-202ENST00000410080 SLC12A5Q9H2X9 1139 aa13.14□□□□□ -0.31
PRPF40A-202ENST00000410080 AK9Q5TCS8 1911 aa13.14□□□□□ -0.31
PRPF40A-202ENST00000410080 MAP2K1Q02750 393 aaPredicted RBP13.13□□□□□ -0.31
PRPF40A-202ENST00000410080 THEMISQ8N1K5 641 aaPredicted RBP13.13□□□□□ -0.31
PRPF40A-202ENST00000410080 GRIN2BQ13224 1484 aa13.13□□□□□ -0.31
PRPF40A-202ENST00000410080 CCDC178Q5BJE1 867 aa13.13□□□□□ -0.31
PRPF40A-202ENST00000410080 RGS22Q8NE09 1264 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms