RNA–Protein interactions for RNA: ENST00000409938.5

EPHA4-203, Transcript of EPH receptor A4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene EPHA4, Length 3,363 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-203ENST00000409938 FAM83GA6ND36 823 aa9.74□□□□□ -0.85
EPHA4-203ENST00000409938 EIF5BO60841 1220 aaKnown RBP9.74□□□□□ -0.85
EPHA4-203ENST00000409938 NUDT16Q96DE0 195 aaKnown RBP9.74□□□□□ -0.85
EPHA4-203ENST00000409938 PRR36Q9H6K5 1346 aa9.74□□□□□ -0.85
EPHA4-203ENST00000409938 AK9Q5TCS8 1911 aa9.74□□□□□ -0.85
EPHA4-203ENST00000409938 HSP90AB1P08238 724 aaKnown RBP9.74□□□□□ -0.85
EPHA4-203ENST00000409938 USP26Q9BXU7 913 aa9.74□□□□□ -0.85
EPHA4-203ENST00000409938 MARF1Q9Y4F3 1742 aaKnown RBP9.73□□□□□ -0.85
EPHA4-203ENST00000409938 CEP85Q6P2H3 762 aa9.73□□□□□ -0.85
EPHA4-203ENST00000409938 CCDC61Q9Y6R9 512 aa9.73□□□□□ -0.85
EPHA4-203ENST00000409938 PTPRCP08575 1304 aa9.72□□□□□ -0.85
EPHA4-203ENST00000409938 ERBB4Q15303 1308 aa9.72□□□□□ -0.85
EPHA4-203ENST00000409938 RABEP1Q15276 862 aa9.72□□□□□ -0.85
EPHA4-203ENST00000409938 RPAP2Q8IXW5 612 aaPredicted RBP9.72□□□□□ -0.85
EPHA4-203ENST00000409938 SENP3Q9H4L4 574 aaPredicted RBP9.72□□□□□ -0.85
EPHA4-203ENST00000409938 MSH6P52701 1360 aa9.72□□□□□ -0.85
EPHA4-203ENST00000409938 COG3Q96JB2 828 aa9.72□□□□□ -0.85
EPHA4-203ENST00000409938 TSPOAP1O95153 1857 aa9.72□□□□□ -0.85
EPHA4-203ENST00000409938 ADAMTS13Q76LX8 1427 aa9.72□□□□□ -0.85
EPHA4-203ENST00000409938 EIF4A2Q14240 407 aaKnown RBP9.72□□□□□ -0.85
EPHA4-203ENST00000409938 SSFA2P28290 1259 aa9.71□□□□□ -0.85
EPHA4-203ENST00000409938 RRS1Q15050 365 aaKnown RBP9.71□□□□□ -0.85
EPHA4-203ENST00000409938 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.71□□□□□ -0.85
EPHA4-203ENST00000409938 PPP1R9BQ96SB3 815 aa9.71□□□□□ -0.85
EPHA4-203ENST00000409938 OSBPL3Q9H4L5 887 aa9.71□□□□□ -0.85
EPHA4-203ENST00000409938 NCKAP5LQ9HCH0 1330 aa9.71□□□□□ -0.86
EPHA4-203ENST00000409938 CACNA1FO60840 1977 aa9.71□□□□□ -0.86
EPHA4-203ENST00000409938 ELL2O00472 640 aaPredicted RBP9.71□□□□□ -0.86
EPHA4-203ENST00000409938 KLHL40Q2TBA0 621 aa9.71□□□□□ -0.86
EPHA4-203ENST00000409938 USP6P35125 1406 aa9.71□□□□□ -0.86
EPHA4-203ENST00000409938 SALL3Q9BXA9 1300 aa9.71□□□□□ -0.86
EPHA4-203ENST00000409938 BAG4O95429 457 aaKnown RBP9.71□□□□□ -0.86
EPHA4-203ENST00000409938 DCTN1Q14203 1278 aa9.71□□□□□ -0.86
EPHA4-203ENST00000409938 IL17RAQ96F46 866 aa9.71□□□□□ -0.86
EPHA4-203ENST00000409938 ARHGEF10O15013 1369 aa9.7□□□□□ -0.86
EPHA4-203ENST00000409938 ROBO2Q9HCK4 1378 aa9.7□□□□□ -0.86
EPHA4-203ENST00000409938 C16orf71Q8IYS4 520 aaPredicted RBP9.7□□□□□ -0.86
EPHA4-203ENST00000409938 KDRP35968 1356 aa9.7□□□□□ -0.86
EPHA4-203ENST00000409938 AEBP1Q8IUX7 1158 aa9.7□□□□□ -0.86
EPHA4-203ENST00000409938 PLEKHG3A1L390 1219 aa9.69□□□□□ -0.86
EPHA4-203ENST00000409938 SDSP20132 328 aa9.69□□□□□ -0.86
EPHA4-203ENST00000409938 ZNF445P59923 1031 aa9.69□□□□□ -0.86
EPHA4-203ENST00000409938 OTUD7AQ8TE49 926 aaPredicted RBP9.69□□□□□ -0.86
EPHA4-203ENST00000409938 HAP1P54257 671 aaPredicted RBP9.69□□□□□ -0.86
EPHA4-203ENST00000409938 PIK3C2AO00443 1686 aa9.69□□□□□ -0.86
EPHA4-203ENST00000409938 TTC21BQ7Z4L5 1316 aa9.69□□□□□ -0.86
EPHA4-203ENST00000409938 ESPNB1AK53 854 aa9.69□□□□□ -0.86
EPHA4-203ENST00000409938 NWD1Q149M9 1564 aa9.69□□□□□ -0.86
EPHA4-203ENST00000409938 CRYBG1Q9Y4K1 1723 aa9.68□□□□□ -0.86
EPHA4-203ENST00000409938 KRT24Q2M2I5 525 aa9.68□□□□□ -0.86
EPHA4-203ENST00000409938 TXNDC2Q86VQ3 553 aa9.68□□□□□ -0.86
EPHA4-203ENST00000409938 UBE2Q2Q8WVN8 375 aa9.68□□□□□ -0.86
EPHA4-203ENST00000409938 STAG3Q9UJ98 1225 aa9.68□□□□□ -0.86
EPHA4-203ENST00000409938 LMBRD1Q9NUN5 540 aa9.68□□□□□ -0.86
EPHA4-203ENST00000409938 KIF13AQ9H1H9 1805 aa9.68□□□□□ -0.86
EPHA4-203ENST00000409938 TMEM2Q9UHN6 1383 aa9.68□□□□□ -0.86
EPHA4-203ENST00000409938 CWC22Q9HCG8 908 aaKnown RBP9.67□□□□□ -0.86
EPHA4-203ENST00000409938 ZDHHC9Q9Y397 364 aa9.67□□□□□ -0.86
EPHA4-203ENST00000409938 MEIS3Q99687 375 aa9.67□□□□□ -0.86
EPHA4-203ENST00000409938 CEP170BQ9Y4F5 1589 aaPredicted RBP9.67□□□□□ -0.86
EPHA4-203ENST00000409938 NUCB2P80303 420 aa9.67□□□□□ -0.86
EPHA4-203ENST00000409938 SULT6B1Q6IMI4 303 aa9.67□□□□□ -0.86
EPHA4-203ENST00000409938 PXDNLA1KZ92 1463 aa9.67□□□□□ -0.86
EPHA4-203ENST00000409938 PTPRUQ92729 1446 aa9.66□□□□□ -0.86
EPHA4-203ENST00000409938 RGPD8O14715 1765 aaPredicted RBP9.66□□□□□ -0.86
EPHA4-203ENST00000409938 CCDC173Q0VFZ6 552 aa9.66□□□□□ -0.86
EPHA4-203ENST00000409938 FOXD4L1Q9NU39 408 aa9.66□□□□□ -0.86
EPHA4-203ENST00000409938 PLEKHG1Q9ULL1 1385 aa9.66□□□□□ -0.86
EPHA4-203ENST00000409938 MCM10Q7L590 875 aa9.66□□□□□ -0.86
EPHA4-203ENST00000409938 ARXQ96QS3 562 aa9.66□□□□□ -0.86
EPHA4-203ENST00000409938 PKP1Q13835 747 aa9.65□□□□□ -0.86
EPHA4-203ENST00000409938 ACEP12821 1306 aa9.65□□□□□ -0.86
EPHA4-203ENST00000409938 SMARCA5O60264 1052 aaPredicted RBP9.64□□□□□ -0.87
EPHA4-203ENST00000409938 MAP3K19Q56UN5 1328 aa9.64□□□□□ -0.87
EPHA4-203ENST00000409938 MED1Q15648 1581 aaPredicted RBP9.64□□□□□ -0.87
EPHA4-203ENST00000409938 PDLIM2Q96JY6 352 aa9.64□□□□□ -0.87
EPHA4-203ENST00000409938 SBNO1A3KN83 1393 aa9.64□□□□□ -0.87
EPHA4-203ENST00000409938 TNRQ92752 1358 aa9.64□□□□□ -0.87
EPHA4-203ENST00000409938 DIP2AQ14689 1571 aa9.64□□□□□ -0.87
EPHA4-203ENST00000409938 GOLGA6L22H0YM25 854 aa9.64□□□□□ -0.87
EPHA4-203ENST00000409938 HSP90AA1P07900 732 aaKnown RBP9.64□□□□□ -0.87
EPHA4-203ENST00000409938 PDE1AP54750 535 aa9.64□□□□□ -0.87
EPHA4-203ENST00000409938 HSP90AB2PQ58FF8 381 aa9.64□□□□□ -0.87
EPHA4-203ENST00000409938 IGSF1Q8N6C5 1336 aa9.64□□□□□ -0.87
EPHA4-203ENST00000409938 ERC2O15083 957 aa9.63□□□□□ -0.87
EPHA4-203ENST00000409938 SLIT1O75093 1534 aa9.63□□□□□ -0.87
EPHA4-203ENST00000409938 CCT4P50991 539 aaKnown RBP9.63□□□□□ -0.87
EPHA4-203ENST00000409938 FAM69CQ0P6D2 419 aa9.63□□□□□ -0.87
EPHA4-203ENST00000409938 REC8O95072 547 aa9.63□□□□□ -0.87
EPHA4-203ENST00000409938 CUL4AQ13619 759 aa9.63□□□□□ -0.87
EPHA4-203ENST00000409938 ZSCAN23Q3MJ62 389 aa9.63□□□□□ -0.87
EPHA4-203ENST00000409938 G2E3Q7L622 706 aa9.63□□□□□ -0.87
EPHA4-203ENST00000409938 ZGPATQ8N5A5 531 aaKnown RBP9.63□□□□□ -0.87
EPHA4-203ENST00000409938 GPT2Q8TD30 523 aa9.63□□□□□ -0.87
EPHA4-203ENST00000409938 ARHGAP23Q9P227 1491 aa9.63□□□□□ -0.87
EPHA4-203ENST00000409938 TTC21AQ8NDW8 1320 aa9.63□□□□□ -0.87
EPHA4-203ENST00000409938 NASPP49321 788 aaPredicted RBP9.63□□□□□ -0.87
EPHA4-203ENST00000409938 HS1BP3Q53T59 392 aa9.63□□□□□ -0.87
EPHA4-203ENST00000409938 STAP2Q9UGK3 403 aa9.63□□□□□ -0.87
EPHA4-203ENST00000409938 KDM3BQ7LBC6 1761 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms