RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 ZCRB1Q8TBF4 217 aaKnown RBP24.36■■□□□ 1.49
LSM5-204ENST00000409909 WASHC2AQ641Q2 1341 aa24.35■■□□□ 1.49
LSM5-204ENST00000409909 KAT6BQ8WYB5 2073 aa24.35■■□□□ 1.49
LSM5-204ENST00000409909 NBPF14Q5TI25 921 aa24.35■■□□□ 1.49
LSM5-204ENST00000409909 SHANK3Q9BYB0 1731 aa24.35■■□□□ 1.49
LSM5-204ENST00000409909 RAPGEF4Q8WZA2 1011 aa24.33■■□□□ 1.49
LSM5-204ENST00000409909 TXNRD1Q16881 649 aa24.32■■□□□ 1.48
LSM5-204ENST00000409909 LRP5O75197 1615 aa24.32■■□□□ 1.48
LSM5-204ENST00000409909 NSD2O96028 1365 aa24.3■■□□□ 1.48
LSM5-204ENST00000409909 TATP17735 454 aaPredicted RBP24.3■■□□□ 1.48
LSM5-204ENST00000409909 ANO8Q9HCE9 1232 aaPredicted RBP24.3■■□□□ 1.48
LSM5-204ENST00000409909 BTAF1O14981 1849 aa24.3■■□□□ 1.48
LSM5-204ENST00000409909 KNSTRNQ9Y448 316 aa24.29■■□□□ 1.48
LSM5-204ENST00000409909 NCAPD2Q15021 1401 aa24.28■■□□□ 1.48
LSM5-204ENST00000409909 EYA1Q99502 592 aa24.28■■□□□ 1.48
LSM5-204ENST00000409909 PRIM1P49642 420 aaKnown RBP24.27■■□□□ 1.48
LSM5-204ENST00000409909 MORC1Q86VD1 984 aa24.27■■□□□ 1.48
LSM5-204ENST00000409909 EIF4A2Q14240 407 aaKnown RBP24.26■■□□□ 1.47
LSM5-204ENST00000409909 AMER1Q5JTC6 1135 aaPredicted RBP24.26■■□□□ 1.47
LSM5-204ENST00000409909 DOT1LQ8TEK3 1739 aa24.24■■□□□ 1.47
LSM5-204ENST00000409909 PER1O15534 1290 aaPredicted RBP24.24■■□□□ 1.47
LSM5-204ENST00000409909 SYTL4Q96C24 671 aaPredicted RBP24.24■■□□□ 1.47
LSM5-204ENST00000409909 PCDH11XQ9BZA7 1347 aa24.22■■□□□ 1.47
LSM5-204ENST00000409909 PCDH11YQ9BZA8 1340 aa24.22■■□□□ 1.47
LSM5-204ENST00000409909 CYP27B1O15528 508 aa24.22■■□□□ 1.47
LSM5-204ENST00000409909 PDGFDQ9GZP0 370 aaPredicted RBP24.21■■□□□ 1.47
LSM5-204ENST00000409909 LRRC4BQ9NT99 713 aa24.21■■□□□ 1.47
LSM5-204ENST00000409909 PKD1L3Q7Z443 1732 aa24.2■■□□□ 1.46
LSM5-204ENST00000409909 SLC15A2Q16348 729 aa24.19■■□□□ 1.46
LSM5-204ENST00000409909 STK32BQ9NY57 414 aa24.18■■□□□ 1.46
LSM5-204ENST00000409909 PAPPAQ13219 1627 aa24.17■■□□□ 1.46
LSM5-204ENST00000409909 CASZ1Q86V15 1759 aa24.16■■□□□ 1.46
LSM5-204ENST00000409909 IGSF1Q8N6C5 1336 aa24.16■■□□□ 1.46
LSM5-204ENST00000409909 SPG7Q9UQ90 795 aa24.16■■□□□ 1.46
LSM5-204ENST00000409909 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.15■■□□□ 1.464e-7■□□□□ 10.5
LSM5-204ENST00000409909 KCNQ4P56696 695 aa24.14■■□□□ 1.45
LSM5-204ENST00000409909 NKX1-1Q15270 411 aaPredicted RBP24.14■■□□□ 1.45
LSM5-204ENST00000409909 SLC27A3Q5K4L6 730 aa24.14■■□□□ 1.45
LSM5-204ENST00000409909 ZNF827Q17R98 1081 aa24.13■■□□□ 1.45
LSM5-204ENST00000409909 CC2D1BQ5T0F9 858 aaKnown RBP24.13■■□□□ 1.45
LSM5-204ENST00000409909 SPON1Q9HCB6 807 aa24.13■■□□□ 1.45
LSM5-204ENST00000409909 LY75O60449 1722 aa24.13■■□□□ 1.45
LSM5-204ENST00000409909 TOGARAM1Q9Y4F4 1720 aa24.13■■□□□ 1.45
LSM5-204ENST00000409909 MPRIPQ6WCQ1 1025 aa24.11■■□□□ 1.45
LSM5-204ENST00000409909 IL13P35225 146 aa24.1■■□□□ 1.45
LSM5-204ENST00000409909 MTHFSP49914 203 aa24.1■■□□□ 1.45
LSM5-204ENST00000409909 AKT1S1Q96B36 256 aa24.1■■□□□ 1.45
LSM5-204ENST00000409909 ITGB4P16144 1822 aa24.1■■□□□ 1.45
LSM5-204ENST00000409909 ZBTB7AO95365 584 aa24.09■■□□□ 1.45
LSM5-204ENST00000409909 PHKG2P15735 406 aa24.09■■□□□ 1.45
LSM5-204ENST00000409909 AEBP1Q8IUX7 1158 aa24.09■■□□□ 1.45
LSM5-204ENST00000409909 NPC1L1Q9UHC9 1359 aa24.08■■□□□ 1.45
LSM5-204ENST00000409909 IFNL2Q8IZJ0 200 aa24.08■■□□□ 1.45
LSM5-204ENST00000409909 PLEKHG2Q9H7P9 1386 aa24.07■■□□□ 1.44
LSM5-204ENST00000409909 PIGBQ92521 554 aa24.07■■□□□ 1.44
LSM5-204ENST00000409909 CCNL1Q9UK58 526 aaPredicted RBP24.07■■□□□ 1.44
LSM5-204ENST00000409909 CNGB1Q14028 1251 aaPredicted RBP24.06■■□□□ 1.44
LSM5-204ENST00000409909 ATF5Q9Y2D1 282 aaPredicted RBP24.06■■□□□ 1.44
LSM5-204ENST00000409909 SULT6B1Q6IMI4 303 aa24.05■■□□□ 1.44
LSM5-204ENST00000409909 PALLDQ8WX93 1383 aa24.03■■□□□ 1.44
LSM5-204ENST00000409909 PTGER2P43116 358 aa24.03■■□□□ 1.44
LSM5-204ENST00000409909 PLEKHO1Q53GL0 409 aaPredicted RBP24.03■■□□□ 1.44
LSM5-204ENST00000409909 KDRP35968 1356 aa24.03■■□□□ 1.44
LSM5-204ENST00000409909 PPP1R1BQ9UD71 204 aaPredicted RBP24.02■■□□□ 1.44
LSM5-204ENST00000409909 MTFR1LQ9H019 292 aa24.01■■□□□ 1.43
LSM5-204ENST00000409909 TFCP2L1Q9NZI6 479 aa24.01■■□□□ 1.43
LSM5-204ENST00000409909 TUBGCP6Q96RT7 1819 aa24■■□□□ 1.43
LSM5-204ENST00000409909 AMOTQ4VCS5 1084 aa24■■□□□ 1.43
LSM5-204ENST00000409909 ZNF530Q6P9A1 599 aaPredicted RBP24■■□□□ 1.43
LSM5-204ENST00000409909 SMARCC1Q92922 1105 aaPredicted RBP24■■□□□ 1.43
LSM5-204ENST00000409909 TMOD3Q9NYL9 352 aa24■■□□□ 1.43
LSM5-204ENST00000409909 PNPLA7Q6ZV29 1317 aa24■■□□□ 1.43
LSM5-204ENST00000409909 QSER1Q2KHR3 1735 aa23.99■■□□□ 1.43
LSM5-204ENST00000409909 SGIP1Q9BQI5 828 aa23.99■■□□□ 1.43
LSM5-204ENST00000409909 ASAP1Q9ULH1 1129 aa23.98■■□□□ 1.43
LSM5-204ENST00000409909 DIAPH1O60610 1272 aaKnown RBP23.97■■□□□ 1.43
LSM5-204ENST00000409909 DCAF5Q96JK2 942 aa23.97■■□□□ 1.43
LSM5-204ENST00000409909 C5P01031 1676 aa23.96■■□□□ 1.43
LSM5-204ENST00000409909 ERVV-2B6SEH9 535 aa23.96■■□□□ 1.43
LSM5-204ENST00000409909 TAF1LQ8IZX4 1826 aa23.96■■□□□ 1.43
LSM5-204ENST00000409909 KDM6AO15550 1401 aaPredicted RBP23.95■■□□□ 1.42
LSM5-204ENST00000409909 HSP90AB1P08238 724 aaKnown RBP23.95■■□□□ 1.42
LSM5-204ENST00000409909 HMOX1P09601 288 aa23.95■■□□□ 1.42
LSM5-204ENST00000409909 ATG3Q9NT62 314 aa23.95■■□□□ 1.42
LSM5-204ENST00000409909 COL3A1P02461 1466 aaPredicted RBP23.94■■□□□ 1.42
LSM5-204ENST00000409909 SLC16A10Q8TF71 515 aa23.93■■□□□ 1.42
LSM5-204ENST00000409909 LOC102724428A0A0B4J2F2 783 aa23.92■■□□□ 1.42
LSM5-204ENST00000409909 SIK1P57059 783 aa23.92■■□□□ 1.42
LSM5-204ENST00000409909 C1orf141Q5JVX7 400 aa23.92■■□□□ 1.42
LSM5-204ENST00000409909 COL23A1Q86Y22 540 aaPredicted RBP23.92■■□□□ 1.42
LSM5-204ENST00000409909 C4BP0C0L5 1744 aa23.9■■□□□ 1.42
LSM5-204ENST00000409909 CABP4P57796 275 aa23.89■■□□□ 1.41
LSM5-204ENST00000409909 ITPK1Q13572 414 aa23.89■■□□□ 1.41
LSM5-204ENST00000409909 AMIGO3Q86WK7 504 aa23.89■■□□□ 1.41
LSM5-204ENST00000409909 LINC00116Q8NCU8 138 aa23.89■■□□□ 1.41
LSM5-204ENST00000409909 HMGB2P26583 209 aaKnown RBP23.88■■□□□ 1.41
LSM5-204ENST00000409909 ARXQ96QS3 562 aa23.88■■□□□ 1.41
LSM5-204ENST00000409909 FHDC1Q9C0D6 1143 aaPredicted RBP23.88■■□□□ 1.41
LSM5-204ENST00000409909 COL24A1Q17RW2 1714 aa23.87■■□□□ 1.41
LSM5-204ENST00000409909 MSH5O43196 834 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms