RNA–Protein interactions for RNA: ENST00000409894.7

POLR1B-203, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best) BASIC

Gene POLR1B, Length 4,457 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-203ENST00000409894 IQCEQ6IPM2 695 aa10.72□□□□□ -0.69
POLR1B-203ENST00000409894 SMARCC1Q92922 1105 aaPredicted RBP10.72□□□□□ -0.69
POLR1B-203ENST00000409894 EXOC6BQ9Y2D4 811 aa10.72□□□□□ -0.69
POLR1B-203ENST00000409894 CASTP20810 708 aaKnown RBP10.72□□□□□ -0.69
POLR1B-203ENST00000409894 RNF187Q5TA31 235 aaPredicted RBP10.72□□□□□ -0.69
POLR1B-203ENST00000409894 DDX54Q8TDD1 881 aaKnown RBP10.72□□□□□ -0.69
POLR1B-203ENST00000409894 SEPT7Q16181 437 aaKnown RBP10.72□□□□□ -0.69
POLR1B-203ENST00000409894 SAMD1Q6SPF0 538 aaPredicted RBP10.72□□□□□ -0.69
POLR1B-203ENST00000409894 KIAA1328Q86T90 577 aa10.72□□□□□ -0.69
POLR1B-203ENST00000409894 TOP2AP11388 1531 aaKnown RBP10.71□□□□□ -0.69
POLR1B-203ENST00000409894 MRC2Q9UBG0 1479 aa10.71□□□□□ -0.69
POLR1B-203ENST00000409894 STIM1Q13586 685 aa10.71□□□□□ -0.69
POLR1B-203ENST00000409894 CCAR1Q8IX12 1150 aaKnown RBP10.71□□□□□ -0.69
POLR1B-203ENST00000409894 TANGO6Q9C0B7 1094 aa10.71□□□□□ -0.69
POLR1B-203ENST00000409894 SCAND2PQ9GZW5 306 aaPredicted RBP10.71□□□□□ -0.69
POLR1B-203ENST00000409894 SIL1Q9H173 461 aa10.71□□□□□ -0.69
POLR1B-203ENST00000409894 ZRSR2Q15696 482 aaKnown RBP10.71□□□□□ -0.69
POLR1B-203ENST00000409894 TMX1Q9H3N1 280 aa10.71□□□□□ -0.69
POLR1B-203ENST00000409894 ANO10Q9NW15 660 aa10.71□□□□□ -0.69
POLR1B-203ENST00000409894 NOLC1Q14978 699 aaKnown RBP eCLIP10.71□□□□□ -0.7
POLR1B-203ENST00000409894 CDK5RAP3Q96JB5 506 aa10.71□□□□□ -0.7
POLR1B-203ENST00000409894 ZSWIM4Q9H7M6 989 aa10.71□□□□□ -0.7
POLR1B-203ENST00000409894 PLCD3Q8N3E9 789 aa10.7□□□□□ -0.7
POLR1B-203ENST00000409894 CCDC148Q8NFR7 591 aa10.7□□□□□ -0.7
POLR1B-203ENST00000409894 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.7□□□□□ -0.72e-6■■■■■ 96.1
POLR1B-203ENST00000409894 MYOM3Q5VTT5 1437 aa10.7□□□□□ -0.7
POLR1B-203ENST00000409894 KIF5CO60282 957 aa10.7□□□□□ -0.7
POLR1B-203ENST00000409894 TOP1P11387 765 aaKnown RBP10.7□□□□□ -0.7
POLR1B-203ENST00000409894 EIF5P55010 431 aaKnown RBP10.7□□□□□ -0.7
POLR1B-203ENST00000409894 MAP9Q49MG5 647 aa10.7□□□□□ -0.7
POLR1B-203ENST00000409894 TRIM22Q8IYM9 498 aa10.7□□□□□ -0.7
POLR1B-203ENST00000409894 TBC1D32Q96NH3 1257 aa10.7□□□□□ -0.7
POLR1B-203ENST00000409894 SRCIN1Q9C0H9 1055 aa10.7□□□□□ -0.7
POLR1B-203ENST00000409894 ZNF165P49910 485 aa10.7□□□□□ -0.7
POLR1B-203ENST00000409894 HDGFL1Q5TGJ6 251 aa10.7□□□□□ -0.7
POLR1B-203ENST00000409894 ZKSCAN5Q9Y2L8 839 aa10.7□□□□□ -0.7
POLR1B-203ENST00000409894 CCT4P50991 539 aaKnown RBP10.7□□□□□ -0.7
POLR1B-203ENST00000409894 GTF2A1P52655 376 aaPredicted RBP10.7□□□□□ -0.7
POLR1B-203ENST00000409894 ZSCAN23Q3MJ62 389 aa10.7□□□□□ -0.7
POLR1B-203ENST00000409894 ERC1Q8IUD2 1116 aa10.7□□□□□ -0.7
POLR1B-203ENST00000409894 RPAP2Q8IXW5 612 aaPredicted RBP10.7□□□□□ -0.7
POLR1B-203ENST00000409894 TTC12Q9H892 705 aaPredicted RBP10.7□□□□□ -0.7
POLR1B-203ENST00000409894 WDR97A6NE52 1622 aa10.69□□□□□ -0.7
POLR1B-203ENST00000409894 GOLGA6L10A0A0M3HER8 536 aa10.69□□□□□ -0.7
POLR1B-203ENST00000409894 SRGAP3O43295 1099 aa10.69□□□□□ -0.7
POLR1B-203ENST00000409894 DNAAF4Q8WXU2 420 aa10.69□□□□□ -0.7
POLR1B-203ENST00000409894 TBC1D2BQ9UPU7 963 aa10.69□□□□□ -0.7
POLR1B-203ENST00000409894 CASQ1P31415 396 aa10.69□□□□□ -0.7
POLR1B-203ENST00000409894 TFIP11Q9UBB9 837 aaKnown RBP10.69□□□□□ -0.7
POLR1B-203ENST00000409894 SYCP1Q15431 976 aa10.69□□□□□ -0.7
POLR1B-203ENST00000409894 KLHL10Q6JEL2 608 aa10.69□□□□□ -0.7
POLR1B-203ENST00000409894 FAM107BQ9H098 131 aa10.69□□□□□ -0.7
POLR1B-203ENST00000409894 RAI14Q9P0K7 980 aa10.69□□□□□ -0.7
POLR1B-203ENST00000409894 SMARCA5O60264 1052 aaPredicted RBP10.68□□□□□ -0.7
POLR1B-203ENST00000409894 SNW1Q13573 536 aaKnown RBP10.68□□□□□ -0.7
POLR1B-203ENST00000409894 LARP6Q9BRS8 491 aaKnown RBP10.68□□□□□ -0.7
POLR1B-203ENST00000409894 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.68□□□□□ -0.7
POLR1B-203ENST00000409894 V9GYY5 206 aaPredicted RBP10.68□□□□□ -0.7
POLR1B-203ENST00000409894 KRT18P05783 430 aaKnown RBP10.68□□□□□ -0.7
POLR1B-203ENST00000409894 PDIA4P13667 645 aaKnown RBP10.68□□□□□ -0.7
POLR1B-203ENST00000409894 RARSP54136 660 aaKnown RBP10.68□□□□□ -0.7
POLR1B-203ENST00000409894 CEP135Q66GS9 1140 aa10.68□□□□□ -0.7
POLR1B-203ENST00000409894 STAC3Q96MF2 364 aa10.68□□□□□ -0.7
POLR1B-203ENST00000409894 CCDC113Q9H0I3 377 aa10.68□□□□□ -0.7
POLR1B-203ENST00000409894 ZHX3Q9H4I2 956 aa10.68□□□□□ -0.7
POLR1B-203ENST00000409894 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.68□□□□□ -0.7
POLR1B-203ENST00000409894 GAPVD1Q14C86 1478 aa10.68□□□□□ -0.7
POLR1B-203ENST00000409894 NEMFO60524 1076 aa10.68□□□□□ -0.7
POLR1B-203ENST00000409894 CPLX3Q8WVH0 158 aa10.68□□□□□ -0.7
POLR1B-203ENST00000409894 RBM33Q96EV2 1170 aaKnown RBP10.68□□□□□ -0.7
POLR1B-203ENST00000409894 ANKRD50Q9ULJ7 1429 aa10.67□□□□□ -0.7
POLR1B-203ENST00000409894 SSH1Q8WYL5 1049 aa10.67□□□□□ -0.7
POLR1B-203ENST00000409894 RRAGDQ9NQL2 400 aaPredicted RBP10.67□□□□□ -0.7
POLR1B-203ENST00000409894 MAP2K1Q02750 393 aaPredicted RBP10.67□□□□□ -0.7
POLR1B-203ENST00000409894 AACSQ86V21 672 aa10.67□□□□□ -0.7
POLR1B-203ENST00000409894 TXLNBQ8N3L3 684 aa10.67□□□□□ -0.7
POLR1B-203ENST00000409894 TAF4BQ92750 862 aa10.67□□□□□ -0.7
POLR1B-203ENST00000409894 DNA2P51530 1060 aa10.67□□□□□ -0.7
POLR1B-203ENST00000409894 GIMAP6Q6P9H5 292 aa10.67□□□□□ -0.7
POLR1B-203ENST00000409894 LRSAM1Q6UWE0 723 aa10.67□□□□□ -0.7
POLR1B-203ENST00000409894 TMC6Q7Z403 805 aa10.67□□□□□ -0.7
POLR1B-203ENST00000409894 NUTM1Q86Y26 1132 aa10.67□□□□□ -0.7
POLR1B-203ENST00000409894 PAXBP1Q9Y5B6 917 aa10.67□□□□□ -0.7
POLR1B-203ENST00000409894 NUTM2GQ5VZR2 741 aa10.66□□□□□ -0.7
POLR1B-203ENST00000409894 SULT6B1Q6IMI4 303 aa10.66□□□□□ -0.7
POLR1B-203ENST00000409894 PRPF40BQ6NWY9 871 aaKnown RBP10.66□□□□□ -0.7
POLR1B-203ENST00000409894 NUP133Q8WUM0 1156 aa10.66□□□□□ -0.7
POLR1B-203ENST00000409894 BIN1O00499 593 aa10.66□□□□□ -0.7
POLR1B-203ENST00000409894 KRT32Q14532 448 aa10.66□□□□□ -0.7
POLR1B-203ENST00000409894 IMMTQ16891 758 aaKnown RBP10.66□□□□□ -0.7
POLR1B-203ENST00000409894 SYTL4Q96C24 671 aaPredicted RBP10.66□□□□□ -0.7
POLR1B-203ENST00000409894 GTPBP4Q9BZE4 634 aaKnown RBP10.66□□□□□ -0.7
POLR1B-203ENST00000409894 FGD5Q6ZNL6 1462 aa10.66□□□□□ -0.7
POLR1B-203ENST00000409894 GUCY1B3Q02153 619 aa10.66□□□□□ -0.7
POLR1B-203ENST00000409894 SPECC1Q5M775 1068 aa10.66□□□□□ -0.7
POLR1B-203ENST00000409894 MEX3CQ5U5Q3 659 aaKnown RBP10.66□□□□□ -0.7
POLR1B-203ENST00000409894 CCDC186Q7Z3E2 898 aa10.66□□□□□ -0.7
POLR1B-203ENST00000409894 CCDC94Q9BW85 323 aaPredicted RBP10.66□□□□□ -0.7
POLR1B-203ENST00000409894 IGHDP01880 384 aa10.66□□□□□ -0.7
POLR1B-203ENST00000409894 GSDMDP57764 484 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms