RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 KCNF1Q9H3M0 494 aa7.03□□□□□ -1.28
R3HDM1-202ENST00000409478 PYCARDQ9ULZ3 195 aa7.03□□□□□ -1.28
R3HDM1-202ENST00000409478 WDR33Q9C0J8 1336 aaKnown RBP7.03□□□□□ -1.28
R3HDM1-202ENST00000409478 TMPOP42166 694 aaKnown RBP7.02□□□□□ -1.29
R3HDM1-202ENST00000409478 ZNF397Q8NF99 534 aaPredicted RBP7.02□□□□□ -1.29
R3HDM1-202ENST00000409478 PTCH1Q13635 1447 aa7.02□□□□□ -1.29
R3HDM1-202ENST00000409478 HCLS1P14317 486 aaPredicted RBP7.02□□□□□ -1.29
R3HDM1-202ENST00000409478 FOXD4L5Q5VV16 416 aaPredicted RBP7.02□□□□□ -1.29
R3HDM1-202ENST00000409478 CCDC112Q8NEF3 446 aa7.02□□□□□ -1.29
R3HDM1-202ENST00000409478 FOXD4L4Q8WXT5 416 aaPredicted RBP7.02□□□□□ -1.29
R3HDM1-202ENST00000409478 USP48Q86UV5 1035 aa7.02□□□□□ -1.29
R3HDM1-202ENST00000409478 TRIM35Q9UPQ4 493 aa7.02□□□□□ -1.29
R3HDM1-202ENST00000409478 CD109Q6YHK3 1445 aa7.02□□□□□ -1.29
R3HDM1-202ENST00000409478 ATP10BO94823 1461 aa7.01□□□□□ -1.29
R3HDM1-202ENST00000409478 ERC2O15083 957 aa7.01□□□□□ -1.29
R3HDM1-202ENST00000409478 KIF24Q5T7B8 1368 aa7.01□□□□□ -1.29
R3HDM1-202ENST00000409478 CDC42BPBQ9Y5S2 1711 aa7.01□□□□□ -1.29
R3HDM1-202ENST00000409478 SYCP2Q9BX26 1530 aa7.01□□□□□ -1.29
R3HDM1-202ENST00000409478 CHAMP1Q96JM3 812 aa7.01□□□□□ -1.29
R3HDM1-202ENST00000409478 MCCP23508 829 aa7.01□□□□□ -1.29
R3HDM1-202ENST00000409478 UBE2HP62256 183 aa7.01□□□□□ -1.29
R3HDM1-202ENST00000409478 PLEKHF1Q96S99 279 aa7.01□□□□□ -1.29
R3HDM1-202ENST00000409478 FAM53CQ9NYF3 392 aa7.01□□□□□ -1.29
R3HDM1-202ENST00000409478 GADD45BO75293 160 aaPredicted RBP7.01□□□□□ -1.29
R3HDM1-202ENST00000409478 SENP3Q9H4L4 574 aaPredicted RBP7.01□□□□□ -1.29
R3HDM1-202ENST00000409478 NEK4P51957 841 aa7□□□□□ -1.29
R3HDM1-202ENST00000409478 PLCB2Q00722 1185 aa7□□□□□ -1.29
R3HDM1-202ENST00000409478 SLFNL1Q499Z3 407 aa7□□□□□ -1.29
R3HDM1-202ENST00000409478 RNF20Q5VTR2 975 aa7□□□□□ -1.29
R3HDM1-202ENST00000409478 SIRT2Q8IXJ6 389 aa7□□□□□ -1.29
R3HDM1-202ENST00000409478 DCTPP1Q9H773 170 aa7□□□□□ -1.29
R3HDM1-202ENST00000409478 INO80Q9ULG1 1556 aaPredicted RBP7□□□□□ -1.29
R3HDM1-202ENST00000409478 TNNT1P13805 278 aa7□□□□□ -1.29
R3HDM1-202ENST00000409478 PAXIP1Q6ZW49 1069 aaPredicted RBP7□□□□□ -1.29
R3HDM1-202ENST00000409478 TEX2Q8IWB9 1127 aa7□□□□□ -1.29
R3HDM1-202ENST00000409478 C1orf115Q9H7X2 142 aa7□□□□□ -1.29
R3HDM1-202ENST00000409478 ABCA6Q8N139 1617 aa7□□□□□ -1.29
R3HDM1-202ENST00000409478 ABCC4O15439 1325 aa7□□□□□ -1.29
R3HDM1-202ENST00000409478 ANAPC15P60006 121 aa7□□□□□ -1.29
R3HDM1-202ENST00000409478 EFCC1Q9HA90 598 aa7□□□□□ -1.29
R3HDM1-202ENST00000409478 MAP3K4Q9Y6R4 1608 aa7□□□□□ -1.29
R3HDM1-202ENST00000409478 SDSP20132 328 aa6.99□□□□□ -1.29
R3HDM1-202ENST00000409478 FUCA2Q9BTY2 467 aa6.99□□□□□ -1.29
R3HDM1-202ENST00000409478 YY1AP1Q9H869 796 aa6.99□□□□□ -1.29
R3HDM1-202ENST00000409478 ATP6V1DQ9Y5K8 247 aa6.99□□□□□ -1.29
R3HDM1-202ENST00000409478 TRIM6-TRIM34B2RNG4 842 aa6.99□□□□□ -1.29
R3HDM1-202ENST00000409478 CAPN2P17655 700 aa6.99□□□□□ -1.29
R3HDM1-202ENST00000409478 TRIM34Q9BYJ4 488 aa6.99□□□□□ -1.29
R3HDM1-202ENST00000409478 IFT57Q9NWB7 429 aa6.99□□□□□ -1.29
R3HDM1-202ENST00000409478 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.99□□□□□ -1.29
R3HDM1-202ENST00000409478 ERICH4A6NGS2 130 aa6.99□□□□□ -1.29
R3HDM1-202ENST00000409478 CCDC192P0DO97 292 aa6.99□□□□□ -1.29
R3HDM1-202ENST00000409478 RTL1A6NKG5 1358 aa6.99□□□□□ -1.29
R3HDM1-202ENST00000409478 RPAP1Q9BWH6 1393 aaPredicted RBP6.99□□□□□ -1.29
R3HDM1-202ENST00000409478 CYP2C19P33261 490 aa6.98□□□□□ -1.29
R3HDM1-202ENST00000409478 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.98□□□□□ -1.29
R3HDM1-202ENST00000409478 MRPL50Q8N5N7 158 aaKnown RBP6.98□□□□□ -1.29
R3HDM1-202ENST00000409478 SPC24Q8NBT2 197 aa6.98□□□□□ -1.29
R3HDM1-202ENST00000409478 C16orf45Q96MC5 204 aaPredicted RBP6.98□□□□□ -1.29
R3HDM1-202ENST00000409478 RGS12O14924 1447 aa6.98□□□□□ -1.29
R3HDM1-202ENST00000409478 NOL10Q9BSC4 688 aaKnown RBP6.98□□□□□ -1.29
R3HDM1-202ENST00000409478 API5Q9BZZ5 524 aaKnown RBP6.98□□□□□ -1.29
R3HDM1-202ENST00000409478 KIF1BPQ96EK5 621 aa6.98□□□□□ -1.29
R3HDM1-202ENST00000409478 GDPD2Q9HCC8 539 aa6.98□□□□□ -1.29
R3HDM1-202ENST00000409478 HTATSF1O43719 755 aaKnown RBP6.98□□□□□ -1.29
R3HDM1-202ENST00000409478 SMARCA5O60264 1052 aaPredicted RBP6.98□□□□□ -1.29
R3HDM1-202ENST00000409478 PTGS1P23219 599 aa6.98□□□□□ -1.29
R3HDM1-202ENST00000409478 BMS1Q14692 1282 aaKnown RBP6.98□□□□□ -1.29
R3HDM1-202ENST00000409478 KMT5BQ4FZB7 885 aa6.98□□□□□ -1.29
R3HDM1-202ENST00000409478 ERO1AQ96HE7 468 aa6.98□□□□□ -1.29
R3HDM1-202ENST00000409478 CCDC171Q6TFL3 1326 aa6.97□□□□□ -1.29
R3HDM1-202ENST00000409478 U2SURPO15042 1029 aaKnown RBP6.97□□□□□ -1.29
R3HDM1-202ENST00000409478 TPD52L1Q16890 204 aaPredicted RBP6.97□□□□□ -1.29
R3HDM1-202ENST00000409478 CEP135Q66GS9 1140 aa6.97□□□□□ -1.29
R3HDM1-202ENST00000409478 FAM200AQ8TCP9 573 aa6.97□□□□□ -1.29
R3HDM1-202ENST00000409478 FEZ2Q9UHY8 353 aaPredicted RBP6.97□□□□□ -1.29
R3HDM1-202ENST00000409478 ARHGAP5Q13017 1502 aa6.97□□□□□ -1.29
R3HDM1-202ENST00000409478 SPAG9O60271 1321 aaKnown RBP6.97□□□□□ -1.29
R3HDM1-202ENST00000409478 SETBP1Q9Y6X0 1596 aa6.97□□□□□ -1.29
R3HDM1-202ENST00000409478 CHRM1P11229 460 aaPredicted RBP6.97□□□□□ -1.29
R3HDM1-202ENST00000409478 TNNT3P45378 269 aaPredicted RBP6.97□□□□□ -1.29
R3HDM1-202ENST00000409478 CFAP70Q5T0N1 1121 aa6.97□□□□□ -1.29
R3HDM1-202ENST00000409478 IL17RAQ96F46 866 aa6.97□□□□□ -1.29
R3HDM1-202ENST00000409478 PUS7Q96PZ0 661 aaKnown RBP6.97□□□□□ -1.29
R3HDM1-202ENST00000409478 FAM135BQ49AJ0 1406 aa6.97□□□□□ -1.29
R3HDM1-202ENST00000409478 AP5Z1O43299 807 aa6.97□□□□□ -1.29
R3HDM1-202ENST00000409478 TEX35Q5T0J7 233 aa6.97□□□□□ -1.29
R3HDM1-202ENST00000409478 CTR9Q6PD62 1173 aa6.97□□□□□ -1.29
R3HDM1-202ENST00000409478 RPAP2Q8IXW5 612 aaPredicted RBP6.97□□□□□ -1.29
R3HDM1-202ENST00000409478 SRCIN1Q9C0H9 1055 aa6.97□□□□□ -1.29
R3HDM1-202ENST00000409478 SLC12A5Q9H2X9 1139 aa6.97□□□□□ -1.29
R3HDM1-202ENST00000409478 SSH2Q76I76 1423 aa6.96□□□□□ -1.29
R3HDM1-202ENST00000409478 RGS22Q8NE09 1264 aa6.96□□□□□ -1.29
R3HDM1-202ENST00000409478 NEMFO60524 1076 aa6.96□□□□□ -1.3
R3HDM1-202ENST00000409478 CCDC186Q7Z3E2 898 aa6.96□□□□□ -1.3
R3HDM1-202ENST00000409478 DRC7Q8IY82 874 aa6.96□□□□□ -1.3
R3HDM1-202ENST00000409478 ZC3H13Q5T200 1668 aaKnown RBP6.96□□□□□ -1.3
R3HDM1-202ENST00000409478 COL3A1P02461 1466 aaPredicted RBP6.96□□□□□ -1.3
R3HDM1-202ENST00000409478 EPB41L2O43491 1005 aaKnown RBP6.96□□□□□ -1.3
R3HDM1-202ENST00000409478 ZSCAN22P10073 491 aaPredicted RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms