RNA–Protein interactions for RNA: ENST00000409236.6

AFF3-202, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 9,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-202ENST00000409236 TCHPQ9BT92 498 aa16.14■□□□□ 0.17
AFF3-202ENST00000409236 CFAP100Q494V2 611 aa16.14■□□□□ 0.17
AFF3-202ENST00000409236 SPECC1Q5M775 1068 aa16.14■□□□□ 0.17
AFF3-202ENST00000409236 LMAN1P49257 510 aa16.13■□□□□ 0.17
AFF3-202ENST00000409236 PUS7Q96PZ0 661 aaKnown RBP16.13■□□□□ 0.17
AFF3-202ENST00000409236 FKBP5Q13451 457 aaPredicted RBP16.13■□□□□ 0.17
AFF3-202ENST00000409236 PABPN1LA6NDY0 278 aaKnown RBP16.13■□□□□ 0.17
AFF3-202ENST00000409236 TTC31Q49AM3 519 aaPredicted RBP16.13■□□□□ 0.17
AFF3-202ENST00000409236 TUBB4BP68371 445 aa16.13■□□□□ 0.17
AFF3-202ENST00000409236 EVC2Q86UK5 1308 aa16.13■□□□□ 0.17
AFF3-202ENST00000409236 KIF5BP33176 963 aa16.13■□□□□ 0.17
AFF3-202ENST00000409236 PPP1R14CQ8TAE6 165 aa16.13■□□□□ 0.17
AFF3-202ENST00000409236 HSF2BPO75031 334 aa16.12■□□□□ 0.17
AFF3-202ENST00000409236 EID1Q9Y6B2 187 aa16.12■□□□□ 0.17
AFF3-202ENST00000409236 USH1CQ9Y6N9 552 aa16.12■□□□□ 0.17
AFF3-202ENST00000409236 SH2D4BQ5SQS7 431 aa16.12■□□□□ 0.17
AFF3-202ENST00000409236 K7ELQ4 463 aaPredicted RBP16.12■□□□□ 0.17
AFF3-202ENST00000409236 SMC6Q96SB8 1091 aa16.12■□□□□ 0.17
AFF3-202ENST00000409236 MIA2Q96PC5 1412 aa16.12■□□□□ 0.17
AFF3-202ENST00000409236 SH3BGRP55822 239 aaPredicted RBP16.12■□□□□ 0.17
AFF3-202ENST00000409236 LARP1Q6PKG0 1096 aaKnown RBP16.11■□□□□ 0.17
AFF3-202ENST00000409236 PRIMPOLQ96LW4 560 aa16.11■□□□□ 0.17
AFF3-202ENST00000409236 CEBPZQ03701 1054 aaKnown RBP16.11■□□□□ 0.17
AFF3-202ENST00000409236 UBTFL1P0CB47 393 aaPredicted RBP16.11■□□□□ 0.17
AFF3-202ENST00000409236 A0A1B0GUA9 196 aa16.11■□□□□ 0.17
AFF3-202ENST00000409236 RAI14Q9P0K7 980 aa16.11■□□□□ 0.17
AFF3-202ENST00000409236 MATR3P43243 847 aaKnown RBP eCLIP16.1■□□□□ 0.17
AFF3-202ENST00000409236 CCDC174Q6PII3 467 aa16.1■□□□□ 0.17
AFF3-202ENST00000409236 LNPKQ9C0E8 428 aa16.1■□□□□ 0.17
AFF3-202ENST00000409236 FAM114A2Q9NRY5 505 aa16.1■□□□□ 0.17
AFF3-202ENST00000409236 FEZ2Q9UHY8 353 aaPredicted RBP16.1■□□□□ 0.17
AFF3-202ENST00000409236 KIF4AO95239 1232 aa16.1■□□□□ 0.17
AFF3-202ENST00000409236 CEP120Q8N960 986 aa16.1■□□□□ 0.17
AFF3-202ENST00000409236 GNAI1P63096 354 aa16.1■□□□□ 0.17
AFF3-202ENST00000409236 CCDC155Q8N6L0 562 aa16.1■□□□□ 0.17
AFF3-202ENST00000409236 GNL3LQ9NVN8 582 aaKnown RBP16.1■□□□□ 0.17
AFF3-202ENST00000409236 USP47Q96K76 1375 aa16.09■□□□□ 0.17
AFF3-202ENST00000409236 MPHOSPH9Q99550 1183 aa16.09■□□□□ 0.17
AFF3-202ENST00000409236 STIM2Q9P246 746 aa16.09■□□□□ 0.17
AFF3-202ENST00000409236 CCDC69A6NI79 296 aa16.09■□□□□ 0.17
AFF3-202ENST00000409236 GBP6Q6ZN66 633 aa16.09■□□□□ 0.17
AFF3-202ENST00000409236 TSG101Q99816 390 aa16.09■□□□□ 0.17
AFF3-202ENST00000409236 ZHX1Q9UKY1 873 aaPredicted RBP16.09■□□□□ 0.17
AFF3-202ENST00000409236 CWC25Q9NXE8 425 aaPredicted RBP16.09■□□□□ 0.17
AFF3-202ENST00000409236 LIG1P18858 919 aa16.09■□□□□ 0.17
AFF3-202ENST00000409236 COMMD10Q9Y6G5 202 aa16.09■□□□□ 0.17
AFF3-202ENST00000409236 AIMP1Q12904 312 aaKnown RBP16.09■□□□□ 0.17
AFF3-202ENST00000409236 NACAP1Q9BZK3 213 aa16.09■□□□□ 0.17
AFF3-202ENST00000409236 CCDC171Q6TFL3 1326 aa16.09■□□□□ 0.17
AFF3-202ENST00000409236 RPUSD2Q8IZ73 545 aaKnown RBP16.09■□□□□ 0.17
AFF3-202ENST00000409236 CCDC110Q8TBZ0 833 aa16.09■□□□□ 0.17
AFF3-202ENST00000409236 CKAP4Q07065 602 aaKnown RBP16.09■□□□□ 0.17
AFF3-202ENST00000409236 MAATS1Q7Z4T9 603 aa16.09■□□□□ 0.17
AFF3-202ENST00000409236 CAVIN2O95810 425 aa16.08■□□□□ 0.17
AFF3-202ENST00000409236 CCDC183Q5T5S1 534 aa16.08■□□□□ 0.17
AFF3-202ENST00000409236 STMN1P16949 149 aa16.08■□□□□ 0.17
AFF3-202ENST00000409236 A0A1W2PRG0 241 aa16.08■□□□□ 0.16
AFF3-202ENST00000409236 SSX2IPQ9Y2D8 614 aa16.08■□□□□ 0.16
AFF3-202ENST00000409236 HLTFQ14527 1009 aaKnown RBP eCLIP16.08■□□□□ 0.16
AFF3-202ENST00000409236 KIF4BQ2VIQ3 1234 aa16.08■□□□□ 0.16
AFF3-202ENST00000409236 CCDC121Q6ZUS5 278 aa16.08■□□□□ 0.16
AFF3-202ENST00000409236 ZHX3Q9H4I2 956 aa16.08■□□□□ 0.16
AFF3-202ENST00000409236 MXRA7P84157 204 aa16.08■□□□□ 0.16
AFF3-202ENST00000409236 CTNNA2P26232 953 aa16.07■□□□□ 0.16
AFF3-202ENST00000409236 PLVAPQ9BX97 442 aa16.07■□□□□ 0.16
AFF3-202ENST00000409236 IQCGQ9H095 443 aaKnown RBP16.07■□□□□ 0.16
AFF3-202ENST00000409236 HYPKQ9NX55 129 aa16.07■□□□□ 0.16
AFF3-202ENST00000409236 PPP6R1Q9UPN7 881 aa16.07■□□□□ 0.16
AFF3-202ENST00000409236 CTAGE5O15320 804 aa16.07■□□□□ 0.16
AFF3-202ENST00000409236 RASAL2Q9UJF2 1139 aa16.07■□□□□ 0.16
AFF3-202ENST00000409236 MAP3K9P80192 1104 aa16.07■□□□□ 0.16
AFF3-202ENST00000409236 SEPT14Q6ZU15 432 aa16.07■□□□□ 0.16
AFF3-202ENST00000409236 NEUROD6Q96NK8 337 aa16.07■□□□□ 0.16
AFF3-202ENST00000409236 IFI16Q16666 785 aaKnown RBP16.07■□□□□ 0.16
AFF3-202ENST00000409236 LARP1BQ659C4 914 aaKnown RBP16.07■□□□□ 0.16
AFF3-202ENST00000409236 CEP135Q66GS9 1140 aa16.07■□□□□ 0.16
AFF3-202ENST00000409236 ERCC6Q03468 1493 aa16.07■□□□□ 0.16
AFF3-202ENST00000409236 TOP1P11387 765 aaKnown RBP16.07■□□□□ 0.16
AFF3-202ENST00000409236 RUNDC1Q96C34 613 aa16.07■□□□□ 0.16
AFF3-202ENST00000409236 LRRC45Q96CN5 670 aa16.07■□□□□ 0.16
AFF3-202ENST00000409236 ZBTB17Q13105 803 aa16.06■□□□□ 0.16
AFF3-202ENST00000409236 CTNNBL1Q8WYA6 563 aaPredicted RBP16.06■□□□□ 0.16
AFF3-202ENST00000409236 PHAXQ9H814 394 aaKnown RBP16.06■□□□□ 0.16
AFF3-202ENST00000409236 MAP4K4O95819 1239 aaPredicted RBP16.06■□□□□ 0.16
AFF3-202ENST00000409236 CLIP2Q9UDT6 1046 aa16.06■□□□□ 0.16
AFF3-202ENST00000409236 YEATS4O95619 227 aa16.06■□□□□ 0.16
AFF3-202ENST00000409236 NUP88Q99567 741 aaPredicted RBP16.06■□□□□ 0.16
AFF3-202ENST00000409236 SRCIN1Q9C0H9 1055 aa16.06■□□□□ 0.16
AFF3-202ENST00000409236 MAP7D1Q3KQU3 841 aa16.06■□□□□ 0.16
AFF3-202ENST00000409236 SAMD1Q6SPF0 538 aaPredicted RBP16.06■□□□□ 0.16
AFF3-202ENST00000409236 LTV1Q96GA3 475 aaPredicted RBP16.06■□□□□ 0.16
AFF3-202ENST00000409236 CCDC50Q8IVM0 306 aa16.06■□□□□ 0.16
AFF3-202ENST00000409236 ZSCAN31Q96LW9 406 aaPredicted RBP16.06■□□□□ 0.16
AFF3-202ENST00000409236 LUC7L2Q9Y383 392 aaKnown RBP16.06■□□□□ 0.16
AFF3-202ENST00000409236 EIF2S2P20042 333 aaKnown RBP16.05■□□□□ 0.16
AFF3-202ENST00000409236 KIF5AQ12840 1032 aa16.05■□□□□ 0.16
AFF3-202ENST00000409236 CFAP58Q5T655 872 aa16.05■□□□□ 0.16
AFF3-202ENST00000409236 CACNA2D4Q7Z3S7 1137 aa16.05■□□□□ 0.16
AFF3-202ENST00000409236 ANO10Q9NW15 660 aa16.05■□□□□ 0.16
AFF3-202ENST00000409236 GCC1Q96CN9 775 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms