RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 PPM1GO15355 546 aaPredicted RBP17.6■□□□□ 0.41
SNORD88B-201ENST00000408454 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.6■□□□□ 0.41
SNORD88B-201ENST00000408454 MYOM1P52179 1685 aa17.59■□□□□ 0.41
SNORD88B-201ENST00000408454 WASHC2AQ641Q2 1341 aa17.59■□□□□ 0.41
SNORD88B-201ENST00000408454 SMARCC1Q92922 1105 aaPredicted RBP17.59■□□□□ 0.41
SNORD88B-201ENST00000408454 KNSTRNQ9Y448 316 aa17.59■□□□□ 0.41
SNORD88B-201ENST00000408454 HSP90AB2PQ58FF8 381 aa17.57■□□□□ 0.4
SNORD88B-201ENST00000408454 NBPF6Q5VWK0 638 aa17.57■□□□□ 0.4
SNORD88B-201ENST00000408454 FLAD1Q8NFF5 587 aa17.57■□□□□ 0.4
SNORD88B-201ENST00000408454 NBPF4Q96M43 638 aa17.57■□□□□ 0.4
SNORD88B-201ENST00000408454 CARD14Q9BXL6 1004 aa17.57■□□□□ 0.4
SNORD88B-201ENST00000408454 HSPA5P11021 654 aaKnown RBP17.56■□□□□ 0.4
SNORD88B-201ENST00000408454 POLD1P28340 1107 aa17.56■□□□□ 0.4
SNORD88B-201ENST00000408454 HSP90AB1P08238 724 aaKnown RBP17.55■□□□□ 0.4
SNORD88B-201ENST00000408454 PRIM1P49642 420 aaKnown RBP17.55■□□□□ 0.4
SNORD88B-201ENST00000408454 PROM2Q8N271 834 aa17.55■□□□□ 0.4
SNORD88B-201ENST00000408454 ANO8Q9HCE9 1232 aaPredicted RBP17.55■□□□□ 0.4
SNORD88B-201ENST00000408454 BTAF1O14981 1849 aa17.55■□□□□ 0.4
SNORD88B-201ENST00000408454 MEGF6O75095 1541 aa17.55■□□□□ 0.4
SNORD88B-201ENST00000408454 TFCP2L1Q9NZI6 479 aa17.54■□□□□ 0.4
SNORD88B-201ENST00000408454 MORC1Q86VD1 984 aa17.53■□□□□ 0.4
SNORD88B-201ENST00000408454 CCNL1Q9UK58 526 aaPredicted RBP17.53■□□□□ 0.4
SNORD88B-201ENST00000408454 ANKRD26Q9UPS8 1709 aa17.52■□□□□ 0.4
SNORD88B-201ENST00000408454 EMILIN1Q9Y6C2 1016 aa17.52■□□□□ 0.4
SNORD88B-201ENST00000408454 PTF1AQ7RTS3 328 aa17.51■□□□□ 0.39
SNORD88B-201ENST00000408454 IFNL2Q8IZJ0 200 aa17.51■□□□□ 0.39
SNORD88B-201ENST00000408454 PANK3Q9H999 370 aa17.51■□□□□ 0.39
SNORD88B-201ENST00000408454 CASZ1Q86V15 1759 aa17.51■□□□□ 0.39
SNORD88B-201ENST00000408454 DOT1LQ8TEK3 1739 aa17.5■□□□□ 0.39
SNORD88B-201ENST00000408454 NCAPD2Q15021 1401 aa17.5■□□□□ 0.39
SNORD88B-201ENST00000408454 ZBTB7AO95365 584 aa17.5■□□□□ 0.39
SNORD88B-201ENST00000408454 AMOTQ4VCS5 1084 aa17.5■□□□□ 0.39
SNORD88B-201ENST00000408454 USHBP1Q8N6Y0 703 aa17.5■□□□□ 0.39
SNORD88B-201ENST00000408454 POLKQ9UBT6 870 aa17.5■□□□□ 0.39
SNORD88B-201ENST00000408454 FBLN1P23142 703 aa17.49■□□□□ 0.39
SNORD88B-201ENST00000408454 KAT6BQ8WYB5 2073 aa17.49■□□□□ 0.39
SNORD88B-201ENST00000408454 ARXQ96QS3 562 aa17.48■□□□□ 0.39
SNORD88B-201ENST00000408454 TMOD3Q9NYL9 352 aa17.48■□□□□ 0.39
SNORD88B-201ENST00000408454 PAPPAQ13219 1627 aa17.47■□□□□ 0.39
SNORD88B-201ENST00000408454 NKX1-1Q15270 411 aaPredicted RBP17.47■□□□□ 0.39
SNORD88B-201ENST00000408454 PLEKHO1Q53GL0 409 aaPredicted RBP17.47■□□□□ 0.39
SNORD88B-201ENST00000408454 MAP3K5Q99683 1374 aa17.47■□□□□ 0.39
SNORD88B-201ENST00000408454 QSER1Q2KHR3 1735 aa17.47■□□□□ 0.39
SNORD88B-201ENST00000408454 PALLDQ8WX93 1383 aa17.46■□□□□ 0.39
SNORD88B-201ENST00000408454 MPRIPQ6WCQ1 1025 aa17.46■□□□□ 0.39
SNORD88B-201ENST00000408454 AKT1S1Q96B36 256 aa17.46■□□□□ 0.39
SNORD88B-201ENST00000408454 ATF5Q9Y2D1 282 aaPredicted RBP17.46■□□□□ 0.39
SNORD88B-201ENST00000408454 PKD1L3Q7Z443 1732 aa17.46■□□□□ 0.39
SNORD88B-201ENST00000408454 MSH5O43196 834 aa17.45■□□□□ 0.38
SNORD88B-201ENST00000408454 TNNT2P45379 298 aaPredicted RBP17.45■□□□□ 0.38
SNORD88B-201ENST00000408454 C1orf141Q5JVX7 400 aa17.45■□□□□ 0.38
SNORD88B-201ENST00000408454 EYA1Q99502 592 aa17.45■□□□□ 0.38
SNORD88B-201ENST00000408454 AK7Q96M32 723 aa17.44■□□□□ 0.38
SNORD88B-201ENST00000408454 LY75O60449 1722 aa17.44■□□□□ 0.38
SNORD88B-201ENST00000408454 RGPD2P0DJD1 1756 aa17.43■□□□□ 0.38
SNORD88B-201ENST00000408454 MAP2P11137 1827 aaKnown RBP17.43■□□□□ 0.38
SNORD88B-201ENST00000408454 PTGER2P43116 358 aa17.43■□□□□ 0.38
SNORD88B-201ENST00000408454 EIF4A2Q14240 407 aaKnown RBP17.43■□□□□ 0.38
SNORD88B-201ENST00000408454 DCAF5Q96JK2 942 aa17.43■□□□□ 0.38
SNORD88B-201ENST00000408454 LRRC4BQ9NT99 713 aa17.43■□□□□ 0.38
SNORD88B-201ENST00000408454 SHANK3Q9BYB0 1731 aa17.43■□□□□ 0.38
SNORD88B-201ENST00000408454 IGSF1Q8N6C5 1336 aa17.43■□□□□ 0.38
SNORD88B-201ENST00000408454 ERVV-2B6SEH9 535 aa17.42■□□□□ 0.38
SNORD88B-201ENST00000408454 CYP27B1O15528 508 aa17.42■□□□□ 0.38
SNORD88B-201ENST00000408454 YY1P25490 414 aa17.42■□□□□ 0.38
SNORD88B-201ENST00000408454 SRCAPQ6ZRS2 3230 aa17.41■□□□□ 0.38
SNORD88B-201ENST00000408454 PHKG2P15735 406 aa17.41■□□□□ 0.38
SNORD88B-201ENST00000408454 ZNF827Q17R98 1081 aa17.41■□□□□ 0.38
SNORD88B-201ENST00000408454 SYT17Q9BSW7 474 aa17.4■□□□□ 0.38
SNORD88B-201ENST00000408454 FHDC1Q9C0D6 1143 aaPredicted RBP17.4■□□□□ 0.38
SNORD88B-201ENST00000408454 PNPLA7Q6ZV29 1317 aa17.4■□□□□ 0.38
SNORD88B-201ENST00000408454 SSFA2P28290 1259 aa17.38■□□□□ 0.37
SNORD88B-201ENST00000408454 KIF7Q2M1P5 1343 aa17.38■□□□□ 0.37
SNORD88B-201ENST00000408454 NPC1L1Q9UHC9 1359 aa17.38■□□□□ 0.37
SNORD88B-201ENST00000408454 SGIP1Q9BQI5 828 aa17.37■□□□□ 0.37
SNORD88B-201ENST00000408454 C5P01031 1676 aa17.36■□□□□ 0.37
SNORD88B-201ENST00000408454 LOC102724428A0A0B4J2F2 783 aa17.36■□□□□ 0.37
SNORD88B-201ENST00000408454 SIK1P57059 783 aa17.36■□□□□ 0.37
SNORD88B-201ENST00000408454 CABP4P57796 275 aa17.36■□□□□ 0.37
SNORD88B-201ENST00000408454 ZNF530Q6P9A1 599 aaPredicted RBP17.36■□□□□ 0.37
SNORD88B-201ENST00000408454 PIGBQ92521 554 aa17.36■□□□□ 0.37
SNORD88B-201ENST00000408454 GRIN3BO60391 1043 aa17.35■□□□□ 0.37
SNORD88B-201ENST00000408454 MTHFSP49914 203 aa17.35■□□□□ 0.37
SNORD88B-201ENST00000408454 KLHL34Q8N239 644 aa17.35■□□□□ 0.37
SNORD88B-201ENST00000408454 CFAP53Q96M91 514 aa17.35■□□□□ 0.37
SNORD88B-201ENST00000408454 PDGFDQ9GZP0 370 aaPredicted RBP17.35■□□□□ 0.37
SNORD88B-201ENST00000408454 ADRA2BP18089 450 aa17.34■□□□□ 0.37
SNORD88B-201ENST00000408454 KDRP35968 1356 aa17.34■□□□□ 0.37
SNORD88B-201ENST00000408454 ATP6V1AP38606 617 aa17.34■□□□□ 0.37
SNORD88B-201ENST00000408454 GPR162Q16538 588 aa17.34■□□□□ 0.37
SNORD88B-201ENST00000408454 DIAPH1O60610 1272 aaKnown RBP17.33■□□□□ 0.36
SNORD88B-201ENST00000408454 AMER1Q5JTC6 1135 aaPredicted RBP17.33■□□□□ 0.36
SNORD88B-201ENST00000408454 SULT6B1Q6IMI4 303 aa17.33■□□□□ 0.36
SNORD88B-201ENST00000408454 CD2APQ9Y5K6 639 aa17.32■□□□□ 0.36
SNORD88B-201ENST00000408454 AKAP4Q5JQC9 854 aa17.31■□□□□ 0.36
SNORD88B-201ENST00000408454 RTCBQ9Y3I0 505 aaKnown RBP17.31■□□□□ 0.36
SNORD88B-201ENST00000408454 C4BP0C0L5 1744 aa17.3■□□□□ 0.36
SNORD88B-201ENST00000408454 RC3H1Q5TC82 1133 aaKnown RBP17.3■□□□□ 0.36
SNORD88B-201ENST00000408454 COL23A1Q86Y22 540 aaPredicted RBP17.3■□□□□ 0.36
SNORD88B-201ENST00000408454 NUDCQ9Y266 331 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms