RNA–Protein interactions for RNA: ENST00000404548.5

HDAC11-205, Transcript of histone deacetylase 11, humanhuman

TSL 4 BASIC

Gene HDAC11, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-205ENST00000404548 SYT17Q9BSW7 474 aa27.14■■□□□ 1.94
HDAC11-205ENST00000404548 FHDC1Q9C0D6 1143 aaPredicted RBP27.14■■□□□ 1.94
HDAC11-205ENST00000404548 KAT6BQ8WYB5 2073 aa27.13■■□□□ 1.93
HDAC11-205ENST00000404548 NSD2O96028 1365 aa27.13■■□□□ 1.93
HDAC11-205ENST00000404548 FBLN1P23142 703 aa27.13■■□□□ 1.93
HDAC11-205ENST00000404548 SLC16A10Q8TF71 515 aa27.13■■□□□ 1.93
HDAC11-205ENST00000404548 DOT1LQ8TEK3 1739 aa27.13■■□□□ 1.93
HDAC11-205ENST00000404548 GGNBP2Q9H3C7 697 aa27.12■■□□□ 1.93
HDAC11-205ENST00000404548 RRS1Q15050 365 aaKnown RBP27.11■■□□□ 1.93
HDAC11-205ENST00000404548 ARXQ96QS3 562 aa27.11■■□□□ 1.93
HDAC11-205ENST00000404548 RGPD2P0DJD1 1756 aa27.11■■□□□ 1.93
HDAC11-205ENST00000404548 INSRP06213 1382 aa27.1■■□□□ 1.93
HDAC11-205ENST00000404548 PRIM1P49642 420 aaKnown RBP27.1■■□□□ 1.93
HDAC11-205ENST00000404548 NBPF6Q5VWK0 638 aa27.1■■□□□ 1.93
HDAC11-205ENST00000404548 NBPF4Q96M43 638 aa27.1■■□□□ 1.93
HDAC11-205ENST00000404548 LY75O60449 1722 aa27.1■■□□□ 1.93
HDAC11-205ENST00000404548 FLT4P35916 1363 aa27.09■■□□□ 1.93
HDAC11-205ENST00000404548 TIMELESSQ9UNS1 1208 aa27.09■■□□□ 1.93
HDAC11-205ENST00000404548 KIF20BQ96Q89 1820 aa27.09■■□□□ 1.93
HDAC11-205ENST00000404548 SYTL4Q96C24 671 aaPredicted RBP27.08■■□□□ 1.93
HDAC11-205ENST00000404548 COL24A1Q17RW2 1714 aa27.07■■□□□ 1.92
HDAC11-205ENST00000404548 RAPGEF4Q8WZA2 1011 aa27.07■■□□□ 1.92
HDAC11-205ENST00000404548 GOLGB1Q14789 3259 aaKnown RBP27.07■■□□□ 1.92
HDAC11-205ENST00000404548 PNPLA7Q6ZV29 1317 aa27.06■■□□□ 1.92
HDAC11-205ENST00000404548 PCDH11XQ9BZA7 1347 aa27.02■■□□□ 1.92
HDAC11-205ENST00000404548 PCDH11YQ9BZA8 1340 aa27.02■■□□□ 1.92
HDAC11-205ENST00000404548 TATP17735 454 aaPredicted RBP27.02■■□□□ 1.92
HDAC11-205ENST00000404548 HSP90AB2PQ58FF8 381 aa27.02■■□□□ 1.92
HDAC11-205ENST00000404548 TFCP2L1Q9NZI6 479 aa27.02■■□□□ 1.92
HDAC11-205ENST00000404548 CLSPNQ9HAW4 1339 aa27.01■■□□□ 1.91
HDAC11-205ENST00000404548 HMGB2P26583 209 aaKnown RBP27.01■■□□□ 1.91
HDAC11-205ENST00000404548 USHBP1Q8N6Y0 703 aa27.01■■□□□ 1.91
HDAC11-205ENST00000404548 NCAPD2Q15021 1401 aa27■■□□□ 1.91
HDAC11-205ENST00000404548 NSD3Q9BZ95 1437 aa27■■□□□ 1.91
HDAC11-205ENST00000404548 TUBGCP6Q96RT7 1819 aa27■■□□□ 1.91
HDAC11-205ENST00000404548 POLD1P28340 1107 aa27■■□□□ 1.91
HDAC11-205ENST00000404548 CARD14Q9BXL6 1004 aa27■■□□□ 1.91
HDAC11-205ENST00000404548 CCNL1Q9UK58 526 aaPredicted RBP27■■□□□ 1.91
HDAC11-205ENST00000404548 ANKRD26Q9UPS8 1709 aa26.98■■□□□ 1.91
HDAC11-205ENST00000404548 KCNQ4P56696 695 aa26.96■■□□□ 1.91
HDAC11-205ENST00000404548 PKD1L3Q7Z443 1732 aa26.95■■□□□ 1.9
HDAC11-205ENST00000404548 CHD4Q14839 1912 aa26.94■■□□□ 1.9
HDAC11-205ENST00000404548 ZNF784Q8NCA9 323 aaPredicted RBP26.93■■□□□ 1.9
HDAC11-205ENST00000404548 EMILIN1Q9Y6C2 1016 aa26.93■■□□□ 1.9
HDAC11-205ENST00000404548 CYP27B1O15528 508 aa26.92■■□□□ 1.9
HDAC11-205ENST00000404548 WASHC2AQ641Q2 1341 aa26.91■■□□□ 1.9
HDAC11-205ENST00000404548 PALLDQ8WX93 1383 aa26.91■■□□□ 1.9
HDAC11-205ENST00000404548 C5P01031 1676 aa26.91■■□□□ 1.9
HDAC11-205ENST00000404548 PLEKHG2Q9H7P9 1386 aa26.9■■□□□ 1.9
HDAC11-205ENST00000404548 TOGARAM1Q9Y4F4 1720 aa26.88■■□□□ 1.89
HDAC11-205ENST00000404548 NKX1-1Q15270 411 aaPredicted RBP26.88■■□□□ 1.89
HDAC11-205ENST00000404548 FLAD1Q8NFF5 587 aa26.88■■□□□ 1.89
HDAC11-205ENST00000404548 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.88■■□□□ 1.89
HDAC11-205ENST00000404548 COL23A1Q86Y22 540 aaPredicted RBP26.87■■□□□ 1.89
HDAC11-205ENST00000404548 SMARCC1Q92922 1105 aaPredicted RBP26.87■■□□□ 1.89
HDAC11-205ENST00000404548 GPR162Q16538 588 aa26.86■■□□□ 1.89
HDAC11-205ENST00000404548 MPRIPQ6WCQ1 1025 aa26.85■■□□□ 1.89
HDAC11-205ENST00000404548 SPG7Q9UQ90 795 aa26.85■■□□□ 1.89
HDAC11-205ENST00000404548 TAF1LQ8IZX4 1826 aa26.85■■□□□ 1.89
HDAC11-205ENST00000404548 ITGB4P16144 1822 aa26.83■■□□□ 1.89
HDAC11-205ENST00000404548 PPM1GO15355 546 aaPredicted RBP26.82■■□□□ 1.88
HDAC11-205ENST00000404548 KLHL34Q8N239 644 aa26.82■■□□□ 1.88
HDAC11-205ENST00000404548 POLKQ9UBT6 870 aa26.82■■□□□ 1.88
HDAC11-205ENST00000404548 MSH5O43196 834 aa26.81■■□□□ 1.88
HDAC11-205ENST00000404548 NLGN2Q8NFZ4 835 aa26.81■■□□□ 1.88
HDAC11-205ENST00000404548 EYA1Q99502 592 aa26.81■■□□□ 1.88
HDAC11-205ENST00000404548 C4BP0C0L5 1744 aa26.81■■□□□ 1.88
HDAC11-205ENST00000404548 PIGBQ92521 554 aa26.8■■□□□ 1.88
HDAC11-205ENST00000404548 MAP2P11137 1827 aaKnown RBP26.8■■□□□ 1.88
HDAC11-205ENST00000404548 AK7Q96M32 723 aa26.76■■□□□ 1.87
HDAC11-205ENST00000404548 CD2APQ9Y5K6 639 aa26.76■■□□□ 1.87
HDAC11-205ENST00000404548 GRIN3BO60391 1043 aa26.75■■□□□ 1.87
HDAC11-205ENST00000404548 IFNL2Q8IZJ0 200 aa26.75■■□□□ 1.87
HDAC11-205ENST00000404548 PHKG2P15735 406 aa26.74■■□□□ 1.87
HDAC11-205ENST00000404548 EIF4G2P78344 907 aaKnown RBP eCLIP26.74■■□□□ 1.87
HDAC11-205ENST00000404548 EIF4A2Q14240 407 aaKnown RBP26.74■■□□□ 1.87
HDAC11-205ENST00000404548 MSL1Q68DK7 614 aa26.74■■□□□ 1.87
HDAC11-205ENST00000404548 TMOD3Q9NYL9 352 aa26.74■■□□□ 1.87
HDAC11-205ENST00000404548 UBR3Q6ZT12 1888 aa26.74■■□□□ 1.87
HDAC11-205ENST00000404548 LOC102724428A0A0B4J2F2 783 aa26.73■■□□□ 1.87
HDAC11-205ENST00000404548 SSFA2P28290 1259 aa26.73■■□□□ 1.87
HDAC11-205ENST00000404548 SIK1P57059 783 aa26.73■■□□□ 1.87
HDAC11-205ENST00000404548 IGSF1Q8N6C5 1336 aa26.72■■□□□ 1.87
HDAC11-205ENST00000404548 PELP1Q8IZL8 1130 aaKnown RBP26.72■■□□□ 1.87
HDAC11-205ENST00000404548 YBX3P16989 372 aaKnown RBP eCLIP26.7■■□□□ 1.86
HDAC11-205ENST00000404548 PCGF6Q9BYE7 350 aa26.7■■□□□ 1.86
HDAC11-205ENST00000404548 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.69■■□□□ 1.86
HDAC11-205ENST00000404548 AMIGO3Q86WK7 504 aa26.69■■□□□ 1.86
HDAC11-205ENST00000404548 LINC00116Q8NCU8 138 aa26.68■■□□□ 1.86
HDAC11-205ENST00000404548 HSPA5P11021 654 aaKnown RBP26.67■■□□□ 1.86
HDAC11-205ENST00000404548 C1QTNF8P60827 252 aa26.67■■□□□ 1.86
HDAC11-205ENST00000404548 POLR3GLQ9BT43 218 aa26.67■■□□□ 1.86
HDAC11-205ENST00000404548 ASAP1Q9ULH1 1129 aa26.67■■□□□ 1.86
HDAC11-205ENST00000404548 PANK3Q9H999 370 aa26.66■■□□□ 1.86
HDAC11-205ENST00000404548 ZNF831Q5JPB2 1677 aa26.66■■□□□ 1.86
HDAC11-205ENST00000404548 ERVV-2B6SEH9 535 aa26.65■■□□□ 1.86
HDAC11-205ENST00000404548 HSP90AB1P08238 724 aaKnown RBP26.65■■□□□ 1.86
HDAC11-205ENST00000404548 TNNT2P45379 298 aaPredicted RBP26.65■■□□□ 1.86
HDAC11-205ENST00000404548 KDRP35968 1356 aa26.65■■□□□ 1.86
HDAC11-205ENST00000404548 PHF14O94880 888 aa26.64■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms