RNA–Protein interactions for RNA: ENST00000404291.3

STAG3L1-201, Transcript of stromal antigen 3-like 1 (pseudogene), humanhuman

TSL 3 BASIC

Gene STAG3L1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3L1-201ENST00000404291 NSD2O96028 1365 aa11.34□□□□□ -0.59
STAG3L1-201ENST00000404291 POLD1P28340 1107 aa11.34□□□□□ -0.59
STAG3L1-201ENST00000404291 GPR162Q16538 588 aa11.34□□□□□ -0.59
STAG3L1-201ENST00000404291 KLHL34Q8N239 644 aa11.34□□□□□ -0.59
STAG3L1-201ENST00000404291 ZCRB1Q8TBF4 217 aaKnown RBP11.34□□□□□ -0.59
STAG3L1-201ENST00000404291 SLC24A1O60721 1099 aa11.33□□□□□ -0.6
STAG3L1-201ENST00000404291 FAM208AQ9UK61 1670 aaKnown RBP11.33□□□□□ -0.6
STAG3L1-201ENST00000404291 CHD4Q14839 1912 aa11.33□□□□□ -0.6
STAG3L1-201ENST00000404291 MEGF6O75095 1541 aa11.32□□□□□ -0.6
STAG3L1-201ENST00000404291 RRS1Q15050 365 aaKnown RBP11.32□□□□□ -0.6
STAG3L1-201ENST00000404291 NBPF6Q5VWK0 638 aa11.32□□□□□ -0.6
STAG3L1-201ENST00000404291 NBPF4Q96M43 638 aa11.32□□□□□ -0.6
STAG3L1-201ENST00000404291 CCNL1Q9UK58 526 aaPredicted RBP11.32□□□□□ -0.6
STAG3L1-201ENST00000404291 FYB1O15117 783 aa11.31□□□□□ -0.6
STAG3L1-201ENST00000404291 C1QTNF8P60827 252 aa11.31□□□□□ -0.6
STAG3L1-201ENST00000404291 NLGN2Q8NFZ4 835 aa11.31□□□□□ -0.6
STAG3L1-201ENST00000404291 GGNBP2Q9H3C7 697 aa11.31□□□□□ -0.6
STAG3L1-201ENST00000404291 QSER1Q2KHR3 1735 aa11.31□□□□□ -0.6
STAG3L1-201ENST00000404291 RTL1A6NKG5 1358 aa11.3□□□□□ -0.6
STAG3L1-201ENST00000404291 COL23A1Q86Y22 540 aaPredicted RBP11.3□□□□□ -0.6
STAG3L1-201ENST00000404291 PELP1Q8IZL8 1130 aaKnown RBP11.3□□□□□ -0.6
STAG3L1-201ENST00000404291 USHBP1Q8N6Y0 703 aa11.3□□□□□ -0.6
STAG3L1-201ENST00000404291 CGNL1Q0VF96 1302 aa11.3□□□□□ -0.6
STAG3L1-201ENST00000404291 USP47Q96K76 1375 aa11.29□□□□□ -0.6
STAG3L1-201ENST00000404291 COL24A1Q17RW2 1714 aa11.29□□□□□ -0.6
STAG3L1-201ENST00000404291 DOT1LQ8TEK3 1739 aa11.29□□□□□ -0.6
STAG3L1-201ENST00000404291 RGPD2P0DJD1 1756 aa11.29□□□□□ -0.6
STAG3L1-201ENST00000404291 SENP3-EIF4A1A0A087X0R7 540 aa11.29□□□□□ -0.6
STAG3L1-201ENST00000404291 RAPGEF4Q8WZA2 1011 aa11.29□□□□□ -0.6
STAG3L1-201ENST00000404291 LY75O60449 1722 aa11.29□□□□□ -0.6
STAG3L1-201ENST00000404291 SHANK3Q9BYB0 1731 aa11.29□□□□□ -0.6
STAG3L1-201ENST00000404291 UTRNP46939 3433 aa11.28□□□□□ -0.6
STAG3L1-201ENST00000404291 MSH5O43196 834 aa11.28□□□□□ -0.6
STAG3L1-201ENST00000404291 TATP17735 454 aaPredicted RBP11.28□□□□□ -0.6
STAG3L1-201ENST00000404291 TMF1P82094 1093 aa11.28□□□□□ -0.6
STAG3L1-201ENST00000404291 HSP90AB2PQ58FF8 381 aa11.28□□□□□ -0.6
STAG3L1-201ENST00000404291 TUBGCP6Q96RT7 1819 aa11.28□□□□□ -0.6
STAG3L1-201ENST00000404291 YBX3P16989 372 aaKnown RBP eCLIP11.27□□□□□ -0.61
STAG3L1-201ENST00000404291 INSRP06213 1382 aa11.27□□□□□ -0.61
STAG3L1-201ENST00000404291 SMG6Q86US8 1419 aaKnown RBP11.26□□□□□ -0.61
STAG3L1-201ENST00000404291 MSL1Q68DK7 614 aa11.26□□□□□ -0.61
STAG3L1-201ENST00000404291 PCDH11XQ9BZA7 1347 aa11.26□□□□□ -0.61
STAG3L1-201ENST00000404291 PCDH11YQ9BZA8 1340 aa11.26□□□□□ -0.61
STAG3L1-201ENST00000404291 CYP27B1O15528 508 aa11.25□□□□□ -0.61
STAG3L1-201ENST00000404291 GRIN3BO60391 1043 aa11.25□□□□□ -0.61
STAG3L1-201ENST00000404291 GIGYF1O75420 1035 aaPredicted RBP11.25□□□□□ -0.61
STAG3L1-201ENST00000404291 MPRIPQ6WCQ1 1025 aa11.25□□□□□ -0.61
STAG3L1-201ENST00000404291 CLSPNQ9HAW4 1339 aa11.25□□□□□ -0.61
STAG3L1-201ENST00000404291 FLT4P35916 1363 aa11.25□□□□□ -0.61
STAG3L1-201ENST00000404291 PALLDQ8WX93 1383 aa11.25□□□□□ -0.61
STAG3L1-201ENST00000404291 HMGB2P26583 209 aaKnown RBP11.24□□□□□ -0.61
STAG3L1-201ENST00000404291 FLAD1Q8NFF5 587 aa11.24□□□□□ -0.61
STAG3L1-201ENST00000404291 KIF24Q5T7B8 1368 aa11.24□□□□□ -0.61
STAG3L1-201ENST00000404291 CDCA8Q53HL2 280 aa11.23□□□□□ -0.61
STAG3L1-201ENST00000404291 CARD14Q9BXL6 1004 aa11.23□□□□□ -0.61
STAG3L1-201ENST00000404291 CD2APQ9Y5K6 639 aa11.23□□□□□ -0.61
STAG3L1-201ENST00000404291 SMARCC1Q92922 1105 aaPredicted RBP11.22□□□□□ -0.61
STAG3L1-201ENST00000404291 EMILIN1Q9Y6C2 1016 aa11.22□□□□□ -0.61
STAG3L1-201ENST00000404291 NKX1-1Q15270 411 aaPredicted RBP11.21□□□□□ -0.61
STAG3L1-201ENST00000404291 AMIGO3Q86WK7 504 aa11.21□□□□□ -0.61
STAG3L1-201ENST00000404291 PIGBQ92521 554 aa11.21□□□□□ -0.61
STAG3L1-201ENST00000404291 AK7Q96M32 723 aa11.21□□□□□ -0.61
STAG3L1-201ENST00000404291 C5P01031 1676 aa11.2□□□□□ -0.62
STAG3L1-201ENST00000404291 PPM1GO15355 546 aaPredicted RBP11.2□□□□□ -0.62
STAG3L1-201ENST00000404291 SMIM5Q71RC9 77 aa11.2□□□□□ -0.62
STAG3L1-201ENST00000404291 NCAPD2Q15021 1401 aa11.19□□□□□ -0.62
STAG3L1-201ENST00000404291 NSD3Q9BZ95 1437 aa11.19□□□□□ -0.62
STAG3L1-201ENST00000404291 WASHC2AQ641Q2 1341 aa11.19□□□□□ -0.62
STAG3L1-201ENST00000404291 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.19□□□□□ -0.62
STAG3L1-201ENST00000404291 SPG7Q9UQ90 795 aa11.19□□□□□ -0.62
STAG3L1-201ENST00000404291 TAF1LQ8IZX4 1826 aa11.19□□□□□ -0.62
STAG3L1-201ENST00000404291 KIF20BQ96Q89 1820 aa11.19□□□□□ -0.62
STAG3L1-201ENST00000404291 ATP10DQ9P241 1426 aa11.18□□□□□ -0.62
STAG3L1-201ENST00000404291 C4BP0C0L5 1744 aa11.18□□□□□ -0.62
STAG3L1-201ENST00000404291 TOGARAM1Q9Y4F4 1720 aa11.18□□□□□ -0.62
STAG3L1-201ENST00000404291 LOC102724428A0A0B4J2F2 783 aa11.18□□□□□ -0.62
STAG3L1-201ENST00000404291 PHF14O94880 888 aa11.18□□□□□ -0.62
STAG3L1-201ENST00000404291 SIK1P57059 783 aa11.18□□□□□ -0.62
STAG3L1-201ENST00000404291 LINC00116Q8NCU8 138 aa11.18□□□□□ -0.62
STAG3L1-201ENST00000404291 EYA1Q99502 592 aa11.18□□□□□ -0.62
STAG3L1-201ENST00000404291 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.18□□□□□ -0.62
STAG3L1-201ENST00000404291 ITGB4P16144 1822 aa11.17□□□□□ -0.62
STAG3L1-201ENST00000404291 SSFA2P28290 1259 aa11.17□□□□□ -0.62
STAG3L1-201ENST00000404291 TMOD3Q9NYL9 352 aa11.17□□□□□ -0.62
STAG3L1-201ENST00000404291 ASAP1Q9ULH1 1129 aa11.17□□□□□ -0.62
STAG3L1-201ENST00000404291 PKD1L3Q7Z443 1732 aa11.17□□□□□ -0.62
STAG3L1-201ENST00000404291 IGSF1Q8N6C5 1336 aa11.16□□□□□ -0.62
STAG3L1-201ENST00000404291 ITPK1Q13572 414 aa11.16□□□□□ -0.62
STAG3L1-201ENST00000404291 GPBP1L1Q9HC44 474 aaPredicted RBP11.16□□□□□ -0.62
STAG3L1-201ENST00000404291 POLKQ9UBT6 870 aa11.16□□□□□ -0.62
STAG3L1-201ENST00000404291 WWC3Q9ULE0 1092 aa11.16□□□□□ -0.62
STAG3L1-201ENST00000404291 ADCY9O60503 1353 aa11.16□□□□□ -0.62
STAG3L1-201ENST00000404291 GNPATO15228 680 aa11.15□□□□□ -0.62
STAG3L1-201ENST00000404291 PHKG2P15735 406 aa11.15□□□□□ -0.62
STAG3L1-201ENST00000404291 ATP6V1AP38606 617 aa11.15□□□□□ -0.62
STAG3L1-201ENST00000404291 IFNL2Q8IZJ0 200 aa11.15□□□□□ -0.62
STAG3L1-201ENST00000404291 GOLGB1Q14789 3259 aaKnown RBP11.15□□□□□ -0.62
STAG3L1-201ENST00000404291 UBR3Q6ZT12 1888 aa11.15□□□□□ -0.63
STAG3L1-201ENST00000404291 MAP2P11137 1827 aaKnown RBP11.14□□□□□ -0.63
STAG3L1-201ENST00000404291 ATG3Q9NT62 314 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms