RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 NBPF4Q96M43 638 aa21.3■■□□□ 1
TPM1-207ENST00000403994 HSP90AB2PQ58FF8 381 aa21.29■■□□□ 1
TPM1-207ENST00000403994 USHBP1Q8N6Y0 703 aa21.29■■□□□ 1
TPM1-207ENST00000403994 POLR3GLQ9BT43 218 aa21.29■■□□□ 1
TPM1-207ENST00000403994 EMILIN1Q9Y6C2 1016 aa21.29■■□□□ 1
TPM1-207ENST00000403994 DDX54Q8TDD1 881 aaKnown RBP21.28■■□□□ 1
TPM1-207ENST00000403994 NCAPD2Q15021 1401 aa21.28■■□□□ 1
TPM1-207ENST00000403994 LY75O60449 1722 aa21.27■■□□□ 1
TPM1-207ENST00000403994 TOGARAM1Q9Y4F4 1720 aa21.26■□□□□ 0.99
TPM1-207ENST00000403994 NSD2O96028 1365 aa21.25■□□□□ 0.99
TPM1-207ENST00000403994 QSER1Q2KHR3 1735 aa21.24■□□□□ 0.99
TPM1-207ENST00000403994 ZCRB1Q8TBF4 217 aaKnown RBP21.24■□□□□ 0.99
TPM1-207ENST00000403994 TUBGCP6Q96RT7 1819 aa21.24■□□□□ 0.99
TPM1-207ENST00000403994 RAPGEF4Q8WZA2 1011 aa21.23■□□□□ 0.99
TPM1-207ENST00000403994 PDGFDQ9GZP0 370 aaPredicted RBP21.22■□□□□ 0.99
TPM1-207ENST00000403994 SPON1Q9HCB6 807 aa21.22■□□□□ 0.99
TPM1-207ENST00000403994 STK32BQ9NY57 414 aa21.22■□□□□ 0.99
TPM1-207ENST00000403994 PPM1GO15355 546 aaPredicted RBP21.2■□□□□ 0.98
TPM1-207ENST00000403994 TATP17735 454 aaPredicted RBP21.2■□□□□ 0.98
TPM1-207ENST00000403994 SLC15A2Q16348 729 aa21.2■□□□□ 0.98
TPM1-207ENST00000403994 PCDH11XQ9BZA7 1347 aa21.2■□□□□ 0.98
TPM1-207ENST00000403994 PCDH11YQ9BZA8 1340 aa21.2■□□□□ 0.98
TPM1-207ENST00000403994 SYTL4Q96C24 671 aaPredicted RBP21.19■□□□□ 0.98
TPM1-207ENST00000403994 ITGB4P16144 1822 aa21.19■□□□□ 0.98
TPM1-207ENST00000403994 WASHC2AQ641Q2 1341 aa21.19■□□□□ 0.98
TPM1-207ENST00000403994 PANK3Q9H999 370 aa21.18■□□□□ 0.98
TPM1-207ENST00000403994 LRRC4BQ9NT99 713 aa21.18■□□□□ 0.98
TPM1-207ENST00000403994 PRIM1P49642 420 aaKnown RBP21.17■□□□□ 0.98
TPM1-207ENST00000403994 POLKQ9UBT6 870 aa21.17■□□□□ 0.98
TPM1-207ENST00000403994 ZNF827Q17R98 1081 aa21.16■□□□□ 0.98
TPM1-207ENST00000403994 C5P01031 1676 aa21.15■□□□□ 0.98
TPM1-207ENST00000403994 ZBTB7AO95365 584 aa21.15■□□□□ 0.98
TPM1-207ENST00000403994 TNNT2P45379 298 aaPredicted RBP21.15■□□□□ 0.98
TPM1-207ENST00000403994 PPP1R1BQ9UD71 204 aaPredicted RBP21.15■□□□□ 0.98
TPM1-207ENST00000403994 SLC27A3Q5K4L6 730 aa21.14■□□□□ 0.97
TPM1-207ENST00000403994 KIF7Q2M1P5 1343 aa21.13■□□□□ 0.97
TPM1-207ENST00000403994 CYP27B1O15528 508 aa21.13■□□□□ 0.97
TPM1-207ENST00000403994 TAF1LQ8IZX4 1826 aa21.13■□□□□ 0.97
TPM1-207ENST00000403994 COL24A1Q17RW2 1714 aa21.12■□□□□ 0.97
TPM1-207ENST00000403994 EYA1Q99502 592 aa21.12■□□□□ 0.97
TPM1-207ENST00000403994 PTGER2P43116 358 aa21.11■□□□□ 0.97
TPM1-207ENST00000403994 EIF4A2Q14240 407 aaKnown RBP21.11■□□□□ 0.97
TPM1-207ENST00000403994 AKT1S1Q96B36 256 aa21.1■□□□□ 0.97
TPM1-207ENST00000403994 PLEKHG2Q9H7P9 1386 aa21.1■□□□□ 0.97
TPM1-207ENST00000403994 KCNQ4P56696 695 aa21.09■□□□□ 0.97
TPM1-207ENST00000403994 MTFR1LQ9H019 292 aa21.09■□□□□ 0.97
TPM1-207ENST00000403994 ATF5Q9Y2D1 282 aaPredicted RBP21.08■□□□□ 0.97
TPM1-207ENST00000403994 IGSF1Q8N6C5 1336 aa21.07■□□□□ 0.96
TPM1-207ENST00000403994 CCNL1Q9UK58 526 aaPredicted RBP21.07■□□□□ 0.96
TPM1-207ENST00000403994 PALLDQ8WX93 1383 aa21.07■□□□□ 0.96
TPM1-207ENST00000403994 SGIP1Q9BQI5 828 aa21.06■□□□□ 0.96
TPM1-207ENST00000403994 SPG7Q9UQ90 795 aa21.06■□□□□ 0.96
TPM1-207ENST00000403994 KNSTRNQ9Y448 316 aa21.06■□□□□ 0.96
TPM1-207ENST00000403994 UTRNP46939 3433 aa21.06■□□□□ 0.96
TPM1-207ENST00000403994 PNPLA7Q6ZV29 1317 aa21.05■□□□□ 0.96
TPM1-207ENST00000403994 MORC1Q86VD1 984 aa21.05■□□□□ 0.96
TPM1-207ENST00000403994 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.05■□□□□ 0.965e-8■■■■□ 19.9
TPM1-207ENST00000403994 C4BP0C0L5 1744 aa21.04■□□□□ 0.96
TPM1-207ENST00000403994 NKX1-1Q15270 411 aaPredicted RBP21.04■□□□□ 0.96
TPM1-207ENST00000403994 AMER1Q5JTC6 1135 aaPredicted RBP21.04■□□□□ 0.96
TPM1-207ENST00000403994 MPRIPQ6WCQ1 1025 aa21.03■□□□□ 0.96
TPM1-207ENST00000403994 GOLGB1Q14789 3259 aaKnown RBP21.03■□□□□ 0.96
TPM1-207ENST00000403994 TFCP2L1Q9NZI6 479 aa21.02■□□□□ 0.96
TPM1-207ENST00000403994 UBR3Q6ZT12 1888 aa21.01■□□□□ 0.95
TPM1-207ENST00000403994 PHKG2P15735 406 aa21■□□□□ 0.95
TPM1-207ENST00000403994 PIGBQ92521 554 aa20.99■□□□□ 0.95
TPM1-207ENST00000403994 FHDC1Q9C0D6 1143 aaPredicted RBP20.99■□□□□ 0.95
TPM1-207ENST00000403994 MAP3K5Q99683 1374 aa20.98■□□□□ 0.95
TPM1-207ENST00000403994 IFNL2Q8IZJ0 200 aa20.98■□□□□ 0.95
TPM1-207ENST00000403994 SLC16A10Q8TF71 515 aa20.98■□□□□ 0.95
TPM1-207ENST00000403994 KDRP35968 1356 aa20.97■□□□□ 0.95
TPM1-207ENST00000403994 SMARCC1Q92922 1105 aaPredicted RBP20.97■□□□□ 0.95
TPM1-207ENST00000403994 KDM6AO15550 1401 aaPredicted RBP20.96■□□□□ 0.95
TPM1-207ENST00000403994 AEBP1Q8IUX7 1158 aa20.96■□□□□ 0.95
TPM1-207ENST00000403994 ARXQ96QS3 562 aa20.96■□□□□ 0.95
TPM1-207ENST00000403994 TMOD3Q9NYL9 352 aa20.96■□□□□ 0.95
TPM1-207ENST00000403994 ZNF831Q5JPB2 1677 aa20.96■□□□□ 0.95
TPM1-207ENST00000403994 PER1O15534 1290 aaPredicted RBP20.95■□□□□ 0.94
TPM1-207ENST00000403994 SYT17Q9BSW7 474 aa20.94■□□□□ 0.94
TPM1-207ENST00000403994 COL5A3P25940 1745 aaPredicted RBP20.94■□□□□ 0.94
TPM1-207ENST00000403994 SCN11AQ9UI33 1791 aa20.94■□□□□ 0.94
TPM1-207ENST00000403994 VIRMAQ69YN4 1812 aaKnown RBP20.94■□□□□ 0.94
TPM1-207ENST00000403994 IL13P35225 146 aa20.92■□□□□ 0.94
TPM1-207ENST00000403994 ZNF530Q6P9A1 599 aaPredicted RBP20.92■□□□□ 0.94
TPM1-207ENST00000403994 NPC1L1Q9UHC9 1359 aa20.92■□□□□ 0.94
TPM1-207ENST00000403994 COL3A1P02461 1466 aaPredicted RBP20.92■□□□□ 0.94
TPM1-207ENST00000403994 POLD1P28340 1107 aa20.91■□□□□ 0.94
TPM1-207ENST00000403994 PLEKHO1Q53GL0 409 aaPredicted RBP20.91■□□□□ 0.94
TPM1-207ENST00000403994 COL23A1Q86Y22 540 aaPredicted RBP20.91■□□□□ 0.94
TPM1-207ENST00000403994 ASAP1Q9ULH1 1129 aa20.91■□□□□ 0.94
TPM1-207ENST00000403994 LOC102724428A0A0B4J2F2 783 aa20.9■□□□□ 0.94
TPM1-207ENST00000403994 DCAF8L1A6NGE4 600 aa20.9■□□□□ 0.94
TPM1-207ENST00000403994 SIK1P57059 783 aa20.9■□□□□ 0.94
TPM1-207ENST00000403994 AMOTQ4VCS5 1084 aa20.9■□□□□ 0.94
TPM1-207ENST00000403994 CC2D1BQ5T0F9 858 aaKnown RBP20.9■□□□□ 0.94
TPM1-207ENST00000403994 SULT6B1Q6IMI4 303 aa20.9■□□□□ 0.94
TPM1-207ENST00000403994 DCAF5Q96JK2 942 aa20.9■□□□□ 0.94
TPM1-207ENST00000403994 CICQ96RK0 1608 aaPredicted RBP20.89■□□□□ 0.94
TPM1-207ENST00000403994 MSH5O43196 834 aa20.89■□□□□ 0.93
TPM1-207ENST00000403994 HSP90AB1P08238 724 aaKnown RBP20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms