RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 SRPK2P78362 688 aaKnown RBP13.58□□□□□ -0.24
NUP43-204ENST00000403890 ARHGEF25Q86VW2 580 aa13.58□□□□□ -0.24
NUP43-204ENST00000403890 USP6P35125 1406 aa13.57□□□□□ -0.24
NUP43-204ENST00000403890 PAPPAQ13219 1627 aa13.57□□□□□ -0.24
NUP43-204ENST00000403890 CCDC7Q96M83 1385 aa13.57□□□□□ -0.24
NUP43-204ENST00000403890 ARHGEF28Q8N1W1 1705 aaKnown RBP13.56□□□□□ -0.24
NUP43-204ENST00000403890 COL18A1P39060 1754 aa13.56□□□□□ -0.24
NUP43-204ENST00000403890 SLIT3O75094 1523 aa13.56□□□□□ -0.24
NUP43-204ENST00000403890 SLC27A3Q5K4L6 730 aa13.56□□□□□ -0.24
NUP43-204ENST00000403890 KCNH5Q8NCM2 988 aa13.56□□□□□ -0.24
NUP43-204ENST00000403890 TFCP2L1Q9NZI6 479 aa13.56□□□□□ -0.24
NUP43-204ENST00000403890 PNPLA7Q6ZV29 1317 aa13.56□□□□□ -0.24
NUP43-204ENST00000403890 CPSF1Q10570 1443 aaKnown RBP13.56□□□□□ -0.24
NUP43-204ENST00000403890 TNS2Q63HR2 1409 aa13.56□□□□□ -0.24
NUP43-204ENST00000403890 ZNF526Q8TF50 670 aaPredicted RBP13.55□□□□□ -0.24
NUP43-204ENST00000403890 CABP1Q9NZU7 370 aa13.55□□□□□ -0.24
NUP43-204ENST00000403890 WNK3Q9BYP7 1800 aa13.55□□□□□ -0.24
NUP43-204ENST00000403890 CABP2Q9NPB3 220 aa13.54□□□□□ -0.24
NUP43-204ENST00000403890 KAT6BQ8WYB5 2073 aa13.54□□□□□ -0.24
NUP43-204ENST00000403890 NHSQ6T4R5 1651 aa13.53□□□□□ -0.24
NUP43-204ENST00000403890 SOX12O15370 315 aa13.53□□□□□ -0.24
NUP43-204ENST00000403890 POTEIP0CG38 1075 aa13.51□□□□□ -0.25
NUP43-204ENST00000403890 IL2RBP14784 551 aa13.51□□□□□ -0.25
NUP43-204ENST00000403890 APLP1P51693 650 aa13.51□□□□□ -0.25
NUP43-204ENST00000403890 COL24A1Q17RW2 1714 aa13.5□□□□□ -0.25
NUP43-204ENST00000403890 ADCY9O60503 1353 aa13.5□□□□□ -0.25
NUP43-204ENST00000403890 NLRP2Q9NX02 1062 aa13.5□□□□□ -0.25
NUP43-204ENST00000403890 BTAF1O14981 1849 aa13.49□□□□□ -0.25
NUP43-204ENST00000403890 KCNQ4P56696 695 aa13.49□□□□□ -0.25
NUP43-204ENST00000403890 DNAJC5GQ8N7S2 189 aa13.49□□□□□ -0.25
NUP43-204ENST00000403890 CD2APQ9Y5K6 639 aa13.49□□□□□ -0.25
NUP43-204ENST00000403890 TRPM1Q7Z4N2 1603 aa13.49□□□□□ -0.25
NUP43-204ENST00000403890 ABCC6O95255 1503 aa13.49□□□□□ -0.25
NUP43-204ENST00000403890 CENPJQ9HC77 1338 aaPredicted RBP13.48□□□□□ -0.25
NUP43-204ENST00000403890 RGPD5Q99666 1765 aa13.48□□□□□ -0.25
NUP43-204ENST00000403890 QSER1Q2KHR3 1735 aa13.47□□□□□ -0.25
NUP43-204ENST00000403890 TTC21BQ7Z4L5 1316 aa13.47□□□□□ -0.25
NUP43-204ENST00000403890 KIF3CO14782 793 aa13.47□□□□□ -0.25
NUP43-204ENST00000403890 NBPF1Q3BBV0 1214 aa13.46□□□□□ -0.25
NUP43-204ENST00000403890 COL23A1Q86Y22 540 aaPredicted RBP13.46□□□□□ -0.25
NUP43-204ENST00000403890 PIK3C2AO00443 1686 aa13.46□□□□□ -0.26
NUP43-204ENST00000403890 ERBB3P21860 1342 aa13.45□□□□□ -0.26
NUP43-204ENST00000403890 TTC21AQ8NDW8 1320 aa13.45□□□□□ -0.26
NUP43-204ENST00000403890 MSL1Q68DK7 614 aa13.45□□□□□ -0.26
NUP43-204ENST00000403890 DDX54Q8TDD1 881 aaKnown RBP13.45□□□□□ -0.26
NUP43-204ENST00000403890 PRIM1P49642 420 aaKnown RBP13.44□□□□□ -0.26
NUP43-204ENST00000403890 COL13A1Q5TAT6 717 aaPredicted RBP13.44□□□□□ -0.26
NUP43-204ENST00000403890 SYTL4Q96C24 671 aaPredicted RBP13.44□□□□□ -0.26
NUP43-204ENST00000403890 CCNL1Q9UK58 526 aaPredicted RBP13.43□□□□□ -0.26
NUP43-204ENST00000403890 TOMM70O94826 608 aa13.42□□□□□ -0.26
NUP43-204ENST00000403890 ANKRD24Q8TF21 1146 aa13.42□□□□□ -0.26
NUP43-204ENST00000403890 NFAT5O94916 1531 aa13.42□□□□□ -0.26
NUP43-204ENST00000403890 EVC2Q86UK5 1308 aa13.41□□□□□ -0.26
NUP43-204ENST00000403890 PRELPP51888 382 aa13.4□□□□□ -0.26
NUP43-204ENST00000403890 TUBGCP6Q96RT7 1819 aa13.4□□□□□ -0.26
NUP43-204ENST00000403890 ANKRD36BQ8N2N9 1353 aa13.4□□□□□ -0.26
NUP43-204ENST00000403890 QRICH2Q9H0J4 1663 aa13.4□□□□□ -0.26
NUP43-204ENST00000403890 TNS4Q8IZW8 715 aa13.39□□□□□ -0.27
NUP43-204ENST00000403890 FLAD1Q8NFF5 587 aa13.39□□□□□ -0.27
NUP43-204ENST00000403890 IGSF1Q8N6C5 1336 aa13.39□□□□□ -0.27
NUP43-204ENST00000403890 RAB3GAP2Q9H2M9 1393 aa13.38□□□□□ -0.27
NUP43-204ENST00000403890 HMGB2P26583 209 aaKnown RBP13.38□□□□□ -0.27
NUP43-204ENST00000403890 JMYQ8N9B5 988 aa13.38□□□□□ -0.27
NUP43-204ENST00000403890 WWC3Q9ULE0 1092 aa13.38□□□□□ -0.27
NUP43-204ENST00000403890 KIAA1210Q9ULL0 1709 aa13.38□□□□□ -0.27
NUP43-204ENST00000403890 KTN1Q86UP2 1357 aaKnown RBP13.37□□□□□ -0.27
NUP43-204ENST00000403890 KLRG1Q96E93 195 aa13.37□□□□□ -0.27
NUP43-204ENST00000403890 NSD2O96028 1365 aa13.36□□□□□ -0.27
NUP43-204ENST00000403890 USP47Q96K76 1375 aa13.36□□□□□ -0.27
NUP43-204ENST00000403890 GALR2O43603 387 aaPredicted RBP13.36□□□□□ -0.27
NUP43-204ENST00000403890 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.36□□□□□ -0.27
NUP43-204ENST00000403890 USP31Q70CQ4 1352 aa13.35□□□□□ -0.27
NUP43-204ENST00000403890 LY75O60449 1722 aa13.34□□□□□ -0.27
NUP43-204ENST00000403890 ZCRB1Q8TBF4 217 aaKnown RBP13.34□□□□□ -0.27
NUP43-204ENST00000403890 HTRA3P83110 453 aa13.33□□□□□ -0.28
NUP43-204ENST00000403890 NME9Q86XW9 330 aa13.33□□□□□ -0.28
NUP43-204ENST00000403890 RBM46Q8TBY0 533 aaKnown RBP13.33□□□□□ -0.28
NUP43-204ENST00000403890 NMRK2Q9NPI5 230 aa13.33□□□□□ -0.28
NUP43-204ENST00000403890 IP6K1Q92551 441 aa13.32□□□□□ -0.28
NUP43-204ENST00000403890 LTV1Q96GA3 475 aaPredicted RBP13.32□□□□□ -0.28
NUP43-204ENST00000403890 FSTL1Q12841 308 aa13.31□□□□□ -0.28
NUP43-204ENST00000403890 C16orf71Q8IYS4 520 aaPredicted RBP13.31□□□□□ -0.28
NUP43-204ENST00000403890 MNX1P50219 401 aaPredicted RBP13.3□□□□□ -0.28
NUP43-204ENST00000403890 AK7Q96M32 723 aa13.29□□□□□ -0.28
NUP43-204ENST00000403890 PHF12Q96QT6 1004 aa13.29□□□□□ -0.28
NUP43-204ENST00000403890 DOT1LQ8TEK3 1739 aa13.28□□□□□ -0.28
NUP43-204ENST00000403890 ARHGAP27Q6ZUM4 889 aa13.28□□□□□ -0.28
NUP43-204ENST00000403890 WDR90Q96KV7 1748 aa13.27□□□□□ -0.28
NUP43-204ENST00000403890 LTN1O94822 1766 aa13.27□□□□□ -0.28
NUP43-204ENST00000403890 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.27□□□□□ -0.29
NUP43-204ENST00000403890 PHF14O94880 888 aa13.27□□□□□ -0.29
NUP43-204ENST00000403890 AMIGO3Q86WK7 504 aa13.27□□□□□ -0.29
NUP43-204ENST00000403890 BCS1LQ9Y276 419 aa13.27□□□□□ -0.29
NUP43-204ENST00000403890 SBNO2Q9Y2G9 1366 aa13.27□□□□□ -0.29
NUP43-204ENST00000403890 PCNTO95613 3336 aa13.27□□□□□ -0.29
NUP43-204ENST00000403890 PALLDQ8WX93 1383 aa13.26□□□□□ -0.29
NUP43-204ENST00000403890 CICQ96RK0 1608 aaPredicted RBP13.26□□□□□ -0.29
NUP43-204ENST00000403890 NSD3Q9BZ95 1437 aa13.25□□□□□ -0.29
NUP43-204ENST00000403890 CGNL1Q0VF96 1302 aa13.25□□□□□ -0.29
NUP43-204ENST00000403890 TGFB2P61812 414 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 229.4 ms