RNA–Protein interactions for RNA: ENST00000403441.1

PRAME-204, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-204ENST00000403441 ZCRB1Q8TBF4 217 aaKnown RBP17.29■□□□□ 0.36
PRAME-204ENST00000403441 SLC16A10Q8TF71 515 aa17.29■□□□□ 0.36
PRAME-204ENST00000403441 MEGF6O75095 1541 aa17.28■□□□□ 0.36
PRAME-204ENST00000403441 POLD1P28340 1107 aa17.28■□□□□ 0.36
PRAME-204ENST00000403441 PRIM1P49642 420 aaKnown RBP17.28■□□□□ 0.36
PRAME-204ENST00000403441 ZNF784Q8NCA9 323 aaPredicted RBP17.28■□□□□ 0.36
PRAME-204ENST00000403441 TFCP2L1Q9NZI6 479 aa17.28■□□□□ 0.36
PRAME-204ENST00000403441 CGNL1Q0VF96 1302 aa17.26■□□□□ 0.35
PRAME-204ENST00000403441 PNPLA7Q6ZV29 1317 aa17.26■□□□□ 0.35
PRAME-204ENST00000403441 RGPD2P0DJD1 1756 aa17.26■□□□□ 0.35
PRAME-204ENST00000403441 TMF1P82094 1093 aa17.26■□□□□ 0.35
PRAME-204ENST00000403441 SHANK3Q9BYB0 1731 aa17.26■□□□□ 0.35
PRAME-204ENST00000403441 NSD2O96028 1365 aa17.26■□□□□ 0.35
PRAME-204ENST00000403441 CHD4Q14839 1912 aa17.25■□□□□ 0.35
PRAME-204ENST00000403441 LY75O60449 1722 aa17.25■□□□□ 0.35
PRAME-204ENST00000403441 FBLN1P23142 703 aa17.25■□□□□ 0.35
PRAME-204ENST00000403441 RRS1Q15050 365 aaKnown RBP17.25■□□□□ 0.35
PRAME-204ENST00000403441 GPR162Q16538 588 aa17.25■□□□□ 0.35
PRAME-204ENST00000403441 KLHL34Q8N239 644 aa17.25■□□□□ 0.35
PRAME-204ENST00000403441 RAPGEF4Q8WZA2 1011 aa17.25■□□□□ 0.35
PRAME-204ENST00000403441 KCNQ4P56696 695 aa17.24■□□□□ 0.35
PRAME-204ENST00000403441 GGNBP2Q9H3C7 697 aa17.24■□□□□ 0.35
PRAME-204ENST00000403441 CCNL1Q9UK58 526 aaPredicted RBP17.24■□□□□ 0.35
PRAME-204ENST00000403441 USP47Q96K76 1375 aa17.24■□□□□ 0.35
PRAME-204ENST00000403441 TUBGCP6Q96RT7 1819 aa17.24■□□□□ 0.35
PRAME-204ENST00000403441 FYB1O15117 783 aa17.23■□□□□ 0.35
PRAME-204ENST00000403441 COL24A1Q17RW2 1714 aa17.22■□□□□ 0.35
PRAME-204ENST00000403441 CDCA8Q53HL2 280 aa17.22■□□□□ 0.35
PRAME-204ENST00000403441 NBPF6Q5VWK0 638 aa17.22■□□□□ 0.35
PRAME-204ENST00000403441 USHBP1Q8N6Y0 703 aa17.22■□□□□ 0.35
PRAME-204ENST00000403441 NBPF4Q96M43 638 aa17.22■□□□□ 0.35
PRAME-204ENST00000403441 KIF20BQ96Q89 1820 aa17.21■□□□□ 0.35
PRAME-204ENST00000403441 TATP17735 454 aaPredicted RBP17.21■□□□□ 0.35
PRAME-204ENST00000403441 PCDH11XQ9BZA7 1347 aa17.21■□□□□ 0.34
PRAME-204ENST00000403441 PCDH11YQ9BZA8 1340 aa17.21■□□□□ 0.34
PRAME-204ENST00000403441 INSRP06213 1382 aa17.2■□□□□ 0.34
PRAME-204ENST00000403441 FLT4P35916 1363 aa17.2■□□□□ 0.34
PRAME-204ENST00000403441 KIF24Q5T7B8 1368 aa17.2■□□□□ 0.34
PRAME-204ENST00000403441 MSH5O43196 834 aa17.2■□□□□ 0.34
PRAME-204ENST00000403441 HMGB2P26583 209 aaKnown RBP17.2■□□□□ 0.34
PRAME-204ENST00000403441 PELP1Q8IZL8 1130 aaKnown RBP17.2■□□□□ 0.34
PRAME-204ENST00000403441 C5P01031 1676 aa17.17■□□□□ 0.34
PRAME-204ENST00000403441 HSP90AB2PQ58FF8 381 aa17.17■□□□□ 0.34
PRAME-204ENST00000403441 GOLGB1Q14789 3259 aaKnown RBP17.17■□□□□ 0.34
PRAME-204ENST00000403441 PALLDQ8WX93 1383 aa17.15■□□□□ 0.34
PRAME-204ENST00000403441 COL23A1Q86Y22 540 aaPredicted RBP17.15■□□□□ 0.34
PRAME-204ENST00000403441 NLGN2Q8NFZ4 835 aa17.15■□□□□ 0.34
PRAME-204ENST00000403441 CCER1Q8TC90 406 aaPredicted RBP17.14■□□□□ 0.33
PRAME-204ENST00000403441 NSD3Q9BZ95 1437 aa17.13■□□□□ 0.33
PRAME-204ENST00000403441 MPRIPQ6WCQ1 1025 aa17.13■□□□□ 0.33
PRAME-204ENST00000403441 FLAD1Q8NFF5 587 aa17.13■□□□□ 0.33
PRAME-204ENST00000403441 GRIN3BO60391 1043 aa17.12■□□□□ 0.33
PRAME-204ENST00000403441 C1QTNF8P60827 252 aa17.12■□□□□ 0.33
PRAME-204ENST00000403441 MSL1Q68DK7 614 aa17.12■□□□□ 0.33
PRAME-204ENST00000403441 SMARCC1Q92922 1105 aaPredicted RBP17.12■□□□□ 0.33
PRAME-204ENST00000403441 PKD1L3Q7Z443 1732 aa17.12■□□□□ 0.33
PRAME-204ENST00000403441 SENP3-EIF4A1A0A087X0R7 540 aa17.11■□□□□ 0.33
PRAME-204ENST00000403441 PPM1GO15355 546 aaPredicted RBP17.11■□□□□ 0.33
PRAME-204ENST00000403441 CYP27B1O15528 508 aa17.11■□□□□ 0.33
PRAME-204ENST00000403441 EMILIN1Q9Y6C2 1016 aa17.11■□□□□ 0.33
PRAME-204ENST00000403441 TAF1LQ8IZX4 1826 aa17.1■□□□□ 0.33
PRAME-204ENST00000403441 GIGYF1O75420 1035 aaPredicted RBP17.1■□□□□ 0.33
PRAME-204ENST00000403441 AK7Q96M32 723 aa17.1■□□□□ 0.33
PRAME-204ENST00000403441 CARD14Q9BXL6 1004 aa17.1■□□□□ 0.33
PRAME-204ENST00000403441 SPG7Q9UQ90 795 aa17.1■□□□□ 0.33
PRAME-204ENST00000403441 ANKRD26Q9UPS8 1709 aa17.1■□□□□ 0.33
PRAME-204ENST00000403441 TOGARAM1Q9Y4F4 1720 aa17.1■□□□□ 0.33
PRAME-204ENST00000403441 NCAPD2Q15021 1401 aa17.09■□□□□ 0.33
PRAME-204ENST00000403441 C4BP0C0L5 1744 aa17.09■□□□□ 0.33
PRAME-204ENST00000403441 ITGB4P16144 1822 aa17.08■□□□□ 0.33
PRAME-204ENST00000403441 YBX3P16989 372 aaKnown RBP eCLIP17.08■□□□□ 0.32
PRAME-204ENST00000403441 CD2APQ9Y5K6 639 aa17.07■□□□□ 0.32
PRAME-204ENST00000403441 WASHC2AQ641Q2 1341 aa17.06■□□□□ 0.32
PRAME-204ENST00000403441 PIGBQ92521 554 aa17.06■□□□□ 0.32
PRAME-204ENST00000403441 PHF14O94880 888 aa17.05■□□□□ 0.32
PRAME-204ENST00000403441 NKX1-1Q15270 411 aaPredicted RBP17.05■□□□□ 0.32
PRAME-204ENST00000403441 TMOD3Q9NYL9 352 aa17.05■□□□□ 0.32
PRAME-204ENST00000403441 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.04■□□□□ 0.32
PRAME-204ENST00000403441 UBR3Q6ZT12 1888 aa17.03■□□□□ 0.32
PRAME-204ENST00000403441 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.03■□□□□ 0.32
PRAME-204ENST00000403441 LOC102724428A0A0B4J2F2 783 aa17.03■□□□□ 0.32
PRAME-204ENST00000403441 SIK1P57059 783 aa17.03■□□□□ 0.32
PRAME-204ENST00000403441 EYA1Q99502 592 aa17.03■□□□□ 0.32
PRAME-204ENST00000403441 SSFA2P28290 1259 aa17.02■□□□□ 0.32
PRAME-204ENST00000403441 MAP2P11137 1827 aaKnown RBP17.02■□□□□ 0.31
PRAME-204ENST00000403441 IFNL2Q8IZJ0 200 aa17.01■□□□□ 0.31
PRAME-204ENST00000403441 PLEKHG2Q9H7P9 1386 aa17.01■□□□□ 0.31
PRAME-204ENST00000403441 AMIGO3Q86WK7 504 aa17■□□□□ 0.31
PRAME-204ENST00000403441 LINC00116Q8NCU8 138 aa17■□□□□ 0.31
PRAME-204ENST00000403441 POLR3GLQ9BT43 218 aa17■□□□□ 0.31
PRAME-204ENST00000403441 ATP10DQ9P241 1426 aa17■□□□□ 0.31
PRAME-204ENST00000403441 POLKQ9UBT6 870 aa17■□□□□ 0.31
PRAME-204ENST00000403441 GNPATO15228 680 aa16.99■□□□□ 0.31
PRAME-204ENST00000403441 PHKG2P15735 406 aa16.99■□□□□ 0.31
PRAME-204ENST00000403441 ASAP1Q9ULH1 1129 aa16.99■□□□□ 0.31
PRAME-204ENST00000403441 ATP6V1AP38606 617 aa16.98■□□□□ 0.31
PRAME-204ENST00000403441 TNNT2P45379 298 aaPredicted RBP16.98■□□□□ 0.31
PRAME-204ENST00000403441 IGSF1Q8N6C5 1336 aa16.97■□□□□ 0.31
PRAME-204ENST00000403441 EIF4A2Q14240 407 aaKnown RBP16.97■□□□□ 0.31
PRAME-204ENST00000403441 SMIM5Q71RC9 77 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms