RNA–Protein interactions for RNA: ENST00000402550.5

CGREF1-204, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 2 BASIC

Gene CGREF1, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-204ENST00000402550 EXOC5O00471 708 aa35.72■■■■□ 3.31
CGREF1-204ENST00000402550 TATP17735 454 aaPredicted RBP35.72■■■■□ 3.31
CGREF1-204ENST00000402550 FAM9BQ8IZU0 186 aa35.72■■■■□ 3.31
CGREF1-204ENST00000402550 PARP4Q9UKK3 1724 aaKnown RBP35.72■■■■□ 3.31
CGREF1-204ENST00000402550 ILDR2Q71H61 639 aa35.71■■■■□ 3.31
CGREF1-204ENST00000402550 BRWD3Q6RI45 1802 aa35.7■■■■□ 3.31
CGREF1-204ENST00000402550 OVOS2A0A0G2JMS6 1433 aa35.68■■■■□ 3.3
CGREF1-204ENST00000402550 PDE3BQ13370 1112 aa35.68■■■■□ 3.3
CGREF1-204ENST00000402550 KRT27Q7Z3Y8 459 aa35.67■■■■□ 3.3
CGREF1-204ENST00000402550 ZCRB1Q8TBF4 217 aaKnown RBP35.67■■■■□ 3.3
CGREF1-204ENST00000402550 ADAMTS8Q9UP79 889 aa35.66■■■■□ 3.3
CGREF1-204ENST00000402550 LRRC37A3O60309 1634 aa35.66■■■■□ 3.3
CGREF1-204ENST00000402550 FCHSD2O94868 740 aa35.64■■■■□ 3.3
CGREF1-204ENST00000402550 PNNQ9H307 717 aaKnown RBP35.64■■■■□ 3.3
CGREF1-204ENST00000402550 RSPH6AQ9H0K4 717 aa35.63■■■■□ 3.29
CGREF1-204ENST00000402550 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP35.63■■■■□ 3.29
CGREF1-204ENST00000402550 TNS2Q63HR2 1409 aa35.62■■■■□ 3.29
CGREF1-204ENST00000402550 MARCH10Q8NA82 808 aaPredicted RBP35.6■■■■□ 3.29
CGREF1-204ENST00000402550 PLEKHG2Q9H7P9 1386 aa35.6■■■■□ 3.29
CGREF1-204ENST00000402550 FAM182BQ5T319 152 aa35.59■■■■□ 3.29
CGREF1-204ENST00000402550 SPG7Q9UQ90 795 aa35.59■■■■□ 3.29
CGREF1-204ENST00000402550 DDX54Q8TDD1 881 aaKnown RBP35.59■■■■□ 3.29
CGREF1-204ENST00000402550 PRKAR2BP31323 418 aa35.58■■■■□ 3.29
CGREF1-204ENST00000402550 PLEKHO1Q53GL0 409 aaPredicted RBP35.58■■■■□ 3.29
CGREF1-204ENST00000402550 EP400Q96L91 3159 aa35.57■■■■□ 3.28
CGREF1-204ENST00000402550 NEFMP07197 916 aa35.57■■■■□ 3.28
CGREF1-204ENST00000402550 AMOTQ4VCS5 1084 aa35.56■■■■□ 3.28
CGREF1-204ENST00000402550 PKD1L3Q7Z443 1732 aa35.55■■■■□ 3.28
CGREF1-204ENST00000402550 CYP27B1O15528 508 aa35.54■■■■□ 3.28
CGREF1-204ENST00000402550 PCDH11XQ9BZA7 1347 aa35.54■■■■□ 3.28
CGREF1-204ENST00000402550 PCDH11YQ9BZA8 1340 aa35.54■■■■□ 3.28
CGREF1-204ENST00000402550 SHANK3Q9BYB0 1731 aa35.54■■■■□ 3.28
CGREF1-204ENST00000402550 PHACTR3Q96KR7 559 aa35.53■■■■□ 3.28
CGREF1-204ENST00000402550 PLEKHF1Q96S99 279 aa35.51■■■■□ 3.27
CGREF1-204ENST00000402550 MAPK8IP3Q9UPT6 1336 aa35.51■■■■□ 3.27
CGREF1-204ENST00000402550 MTHFSDQ2M296 383 aaKnown RBP35.5■■■■□ 3.27
CGREF1-204ENST00000402550 FAM196AQ6ZSG2 479 aa35.5■■■■□ 3.27
CGREF1-204ENST00000402550 CCDC146Q8IYE0 955 aa35.5■■■■□ 3.27
CGREF1-204ENST00000402550 RUNDC1Q96C34 613 aa35.5■■■■□ 3.27
CGREF1-204ENST00000402550 IFNL2Q8IZJ0 200 aa35.48■■■■□ 3.27
CGREF1-204ENST00000402550 ZNF530Q6P9A1 599 aaPredicted RBP35.47■■■■□ 3.27
CGREF1-204ENST00000402550 PHKG2P15735 406 aa35.47■■■■□ 3.27
CGREF1-204ENST00000402550 BCL9O00512 1426 aa35.43■■■■□ 3.26
CGREF1-204ENST00000402550 NKX1-1Q15270 411 aaPredicted RBP35.43■■■■□ 3.26
CGREF1-204ENST00000402550 C1orf141Q5JVX7 400 aa35.42■■■■□ 3.26
CGREF1-204ENST00000402550 GAS2L2Q8NHY3 880 aa35.42■■■■□ 3.26
CGREF1-204ENST00000402550 AKAP4Q5JQC9 854 aa35.4■■■■□ 3.26
CGREF1-204ENST00000402550 KAT6BQ8WYB5 2073 aa35.38■■■■□ 3.25
CGREF1-204ENST00000402550 HSP90AB1P08238 724 aaKnown RBP35.37■■■■□ 3.25
CGREF1-204ENST00000402550 APAF1O14727 1248 aa35.36■■■■□ 3.25
CGREF1-204ENST00000402550 ACSBG1Q96GR2 724 aa35.35■■■■□ 3.25
CGREF1-204ENST00000402550 DCAF5Q96JK2 942 aa35.35■■■■□ 3.25
CGREF1-204ENST00000402550 MPRIPQ6WCQ1 1025 aa35.34■■■■□ 3.25
CGREF1-204ENST00000402550 SBF2Q86WG5 1849 aa35.34■■■■□ 3.25
CGREF1-204ENST00000402550 TRIM37O94972 964 aa35.34■■■■□ 3.25
CGREF1-204ENST00000402550 GNAT3A8MTJ3 354 aa35.33■■■■□ 3.25
CGREF1-204ENST00000402550 KCNQ2O43526 872 aa35.33■■■■□ 3.25
CGREF1-204ENST00000402550 HNRNPUQ00839 825 aaKnown RBP eCLIP35.32■■■■□ 3.24
CGREF1-204ENST00000402550 DLG5Q8TDM6 1919 aa35.32■■■■□ 3.24
CGREF1-204ENST00000402550 PRIM1P49642 420 aaKnown RBP35.31■■■■□ 3.24
CGREF1-204ENST00000402550 NFE2L2Q16236 605 aa35.31■■■■□ 3.24
CGREF1-204ENST00000402550 PTF1AQ7RTS3 328 aa35.3■■■■□ 3.24
CGREF1-204ENST00000402550 MAP3K5Q99683 1374 aa35.3■■■■□ 3.24
CGREF1-204ENST00000402550 TMPOP42166 694 aaKnown RBP35.3■■■■□ 3.24
CGREF1-204ENST00000402550 LGR6Q9HBX8 967 aa35.3■■■■□ 3.24
CGREF1-204ENST00000402550 KDM6AO15550 1401 aaPredicted RBP35.29■■■■□ 3.24
CGREF1-204ENST00000402550 NEUROD2Q15784 382 aa35.29■■■■□ 3.24
CGREF1-204ENST00000402550 BCL11BQ9C0K0 894 aaPredicted RBP35.29■■■■□ 3.24
CGREF1-204ENST00000402550 NGEFQ8N5V2 710 aa35.28■■■■□ 3.24
CGREF1-204ENST00000402550 UPF1Q92900 1129 aaKnown RBP eCLIP35.28■■■■□ 3.24
CGREF1-204ENST00000402550 SYTL4Q96C24 671 aaPredicted RBP35.28■■■■□ 3.24
CGREF1-204ENST00000402550 YTHDC1Q96MU7 727 aaKnown RBP35.27■■■■□ 3.24
CGREF1-204ENST00000402550 RRP7AQ9Y3A4 280 aaKnown RBP35.27■■■■□ 3.24
CGREF1-204ENST00000402550 DOT1LQ8TEK3 1739 aa35.27■■■■□ 3.24
CGREF1-204ENST00000402550 ERVV-2B6SEH9 535 aa35.26■■■■□ 3.24
CGREF1-204ENST00000402550 RIPK4P57078 832 aa35.26■■■■□ 3.24
CGREF1-204ENST00000402550 RNMTO43148 476 aaKnown RBP35.25■■■■□ 3.23
CGREF1-204ENST00000402550 IL17REQ8NFR9 667 aa35.25■■■■□ 3.23
CGREF1-204ENST00000402550 TOGARAM1Q9Y4F4 1720 aa35.25■■■■□ 3.23
CGREF1-204ENST00000402550 SENP3-EIF4A1A0A087X0R7 540 aa35.25■■■■□ 3.23
CGREF1-204ENST00000402550 CCDC125Q86Z20 511 aa35.25■■■■□ 3.23
CGREF1-204ENST00000402550 HTATSF1O43719 755 aaKnown RBP35.24■■■■□ 3.23
CGREF1-204ENST00000402550 SCN11AQ9UI33 1791 aa35.23■■■■□ 3.23
CGREF1-204ENST00000402550 LMOD3Q0VAK6 560 aa35.23■■■■□ 3.23
CGREF1-204ENST00000402550 RTF1Q92541 710 aaKnown RBP35.23■■■■□ 3.23
CGREF1-204ENST00000402550 SALL2Q9Y467 1007 aaPredicted RBP35.23■■■■□ 3.23
CGREF1-204ENST00000402550 NCBP3Q53F19 620 aaKnown RBP35.22■■■■□ 3.23
CGREF1-204ENST00000402550 NHSQ6T4R5 1651 aa35.22■■■■□ 3.23
CGREF1-204ENST00000402550 ITGB4P16144 1822 aa35.21■■■■□ 3.23
CGREF1-204ENST00000402550 VIRMAQ69YN4 1812 aaKnown RBP35.2■■■■□ 3.23
CGREF1-204ENST00000402550 CABP4P57796 275 aa35.2■■■■□ 3.23
CGREF1-204ENST00000402550 NFATC2IPQ8NCF5 419 aa35.2■■■■□ 3.23
CGREF1-204ENST00000402550 ADAMTS7Q9UKP4 1686 aa35.2■■■■□ 3.23
CGREF1-204ENST00000402550 DCTN1Q14203 1278 aa35.19■■■■□ 3.22
CGREF1-204ENST00000402550 MCM10Q7L590 875 aa35.19■■■■□ 3.22
CGREF1-204ENST00000402550 PIGBQ92521 554 aa35.19■■■■□ 3.22
CGREF1-204ENST00000402550 TMOD3Q9NYL9 352 aa35.19■■■■□ 3.22
CGREF1-204ENST00000402550 CEMIPQ8WUJ3 1361 aa35.18■■■■□ 3.22
CGREF1-204ENST00000402550 APBA3O96018 575 aa35.17■■■■□ 3.22
CGREF1-204ENST00000402550 SF3B2Q13435 895 aaKnown RBP35.17■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms