RNA–Protein interactions for RNA: ENST00000399627.3

SBF1-203, Transcript of SET binding factor 1, humanhuman

TSL 5

Gene SBF1, Length 811 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF1-203ENST00000399627 UPF1Q92900 1129 aaKnown RBP eCLIP24.42■■□□□ 1.5
SBF1-203ENST00000399627 MYBBP1AQ9BQG0 1328 aaKnown RBP24.41■■□□□ 1.5
SBF1-203ENST00000399627 SULT6B1Q6IMI4 303 aa24.41■■□□□ 1.5
SBF1-203ENST00000399627 FAM196AQ6ZSG2 479 aa24.4■■□□□ 1.5
SBF1-203ENST00000399627 PKD1L3Q7Z443 1732 aa24.4■■□□□ 1.5
SBF1-203ENST00000399627 DDX54Q8TDD1 881 aaKnown RBP24.39■■□□□ 1.49
SBF1-203ENST00000399627 SBF2Q86WG5 1849 aa24.39■■□□□ 1.49
SBF1-203ENST00000399627 U2SURPO15042 1029 aaKnown RBP24.38■■□□□ 1.49
SBF1-203ENST00000399627 KDRP35968 1356 aa24.38■■□□□ 1.49
SBF1-203ENST00000399627 HMOX1P09601 288 aa24.37■■□□□ 1.49
SBF1-203ENST00000399627 NUDCQ9Y266 331 aa24.35■■□□□ 1.49
SBF1-203ENST00000399627 SPG7Q9UQ90 795 aa24.34■■□□□ 1.49
SBF1-203ENST00000399627 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.33■■□□□ 1.49
SBF1-203ENST00000399627 BCL9O00512 1426 aa24.33■■□□□ 1.49
SBF1-203ENST00000399627 PCDH11XQ9BZA7 1347 aa24.33■■□□□ 1.48
SBF1-203ENST00000399627 PCDH11YQ9BZA8 1340 aa24.33■■□□□ 1.48
SBF1-203ENST00000399627 PLEKHG2Q9H7P9 1386 aa24.32■■□□□ 1.48
SBF1-203ENST00000399627 TRIM37O94972 964 aa24.32■■□□□ 1.48
SBF1-203ENST00000399627 EP400Q96L91 3159 aa24.31■■□□□ 1.48
SBF1-203ENST00000399627 CYP27B1O15528 508 aa24.31■■□□□ 1.48
SBF1-203ENST00000399627 ANP32CO43423 234 aa24.31■■□□□ 1.48
SBF1-203ENST00000399627 TNS1Q9HBL0 1735 aaKnown RBP24.31■■□□□ 1.48
SBF1-203ENST00000399627 U2AF1L5P0DN76 240 aaPredicted RBP24.3■■□□□ 1.48
SBF1-203ENST00000399627 U2AF1Q01081 240 aaKnown RBP eCLIP24.3■■□□□ 1.48
SBF1-203ENST00000399627 PLEKHO1Q53GL0 409 aaPredicted RBP24.3■■□□□ 1.48
SBF1-203ENST00000399627 CCDC125Q86Z20 511 aa24.3■■□□□ 1.48
SBF1-203ENST00000399627 AMOTQ4VCS5 1084 aa24.28■■□□□ 1.48
SBF1-203ENST00000399627 ACSBG1Q96GR2 724 aa24.28■■□□□ 1.48
SBF1-203ENST00000399627 DOT1LQ8TEK3 1739 aa24.27■■□□□ 1.48
SBF1-203ENST00000399627 SF3B2Q13435 895 aaKnown RBP24.27■■□□□ 1.48
SBF1-203ENST00000399627 NHSQ6T4R5 1651 aa24.27■■□□□ 1.48
SBF1-203ENST00000399627 ZNF530Q6P9A1 599 aaPredicted RBP24.26■■□□□ 1.47
SBF1-203ENST00000399627 PTF1AQ7RTS3 328 aa24.26■■□□□ 1.47
SBF1-203ENST00000399627 RSPH6AQ9H0K4 717 aa24.26■■□□□ 1.47
SBF1-203ENST00000399627 KCNQ2O43526 872 aa24.25■■□□□ 1.47
SBF1-203ENST00000399627 PHKG2P15735 406 aa24.25■■□□□ 1.47
SBF1-203ENST00000399627 IFNL2Q8IZJ0 200 aa24.25■■□□□ 1.47
SBF1-203ENST00000399627 PRKAR2BP31323 418 aa24.24■■□□□ 1.47
SBF1-203ENST00000399627 BCL11BQ9C0K0 894 aaPredicted RBP24.24■■□□□ 1.47
SBF1-203ENST00000399627 TOGARAM1Q9Y4F4 1720 aa24.23■■□□□ 1.47
SBF1-203ENST00000399627 FCHSD2O94868 740 aa24.22■■□□□ 1.47
SBF1-203ENST00000399627 NKX1-1Q15270 411 aaPredicted RBP24.22■■□□□ 1.47
SBF1-203ENST00000399627 DEFB132Q7Z7B7 95 aa24.22■■□□□ 1.47
SBF1-203ENST00000399627 BTAF1O14981 1849 aa24.21■■□□□ 1.47
SBF1-203ENST00000399627 ITGB4P16144 1822 aa24.21■■□□□ 1.47
SBF1-203ENST00000399627 APBA3O96018 575 aa24.21■■□□□ 1.47
SBF1-203ENST00000399627 MTHFSDQ2M296 383 aaKnown RBP24.21■■□□□ 1.47
SBF1-203ENST00000399627 BAG6P46379 1132 aa24.2■■□□□ 1.46
SBF1-203ENST00000399627 PRIM1P49642 420 aaKnown RBP24.2■■□□□ 1.46
SBF1-203ENST00000399627 C1orf141Q5JVX7 400 aa24.2■■□□□ 1.46
SBF1-203ENST00000399627 CCDC184Q52MB2 194 aa24.19■■□□□ 1.46
SBF1-203ENST00000399627 SYTL4Q96C24 671 aaPredicted RBP24.19■■□□□ 1.46
SBF1-203ENST00000399627 PHACTR3Q96KR7 559 aa24.19■■□□□ 1.46
SBF1-203ENST00000399627 VIRMAQ69YN4 1812 aaKnown RBP24.19■■□□□ 1.46
SBF1-203ENST00000399627 HSP90AB1P08238 724 aaKnown RBP24.17■■□□□ 1.46
SBF1-203ENST00000399627 EN1Q05925 392 aaPredicted RBP24.17■■□□□ 1.46
SBF1-203ENST00000399627 WDR43Q15061 677 aaKnown RBP eCLIP24.16■■□□□ 1.46
SBF1-203ENST00000399627 AKAP4Q5JQC9 854 aa24.16■■□□□ 1.46
SBF1-203ENST00000399627 SCN11AQ9UI33 1791 aa24.16■■□□□ 1.46
SBF1-203ENST00000399627 MPRIPQ6WCQ1 1025 aa24.15■■□□□ 1.46
SBF1-203ENST00000399627 GAS2L2Q8NHY3 880 aa24.15■■□□□ 1.46
SBF1-203ENST00000399627 KDM6AO15550 1401 aaPredicted RBP24.15■■□□□ 1.46
SBF1-203ENST00000399627 DCAF5Q96JK2 942 aa24.14■■□□□ 1.45
SBF1-203ENST00000399627 CAMKK2Q96RR4 588 aa24.13■■□□□ 1.45
SBF1-203ENST00000399627 PLEKHF1Q96S99 279 aa24.13■■□□□ 1.45
SBF1-203ENST00000399627 RGPD3A6NKT7 1758 aaPredicted RBP24.12■■□□□ 1.45
SBF1-203ENST00000399627 RGPD4Q7Z3J3 1758 aa24.12■■□□□ 1.45
SBF1-203ENST00000399627 EZH2Q15910 746 aaKnown RBP24.12■■□□□ 1.45
SBF1-203ENST00000399627 PNNQ9H307 717 aaKnown RBP24.12■■□□□ 1.45
SBF1-203ENST00000399627 MRS2Q9HD23 443 aa24.12■■□□□ 1.45
SBF1-203ENST00000399627 ADAMTS8Q9UP79 889 aa24.12■■□□□ 1.45
SBF1-203ENST00000399627 PLSCR1O15162 318 aa24.11■■□□□ 1.45
SBF1-203ENST00000399627 NEFMP07197 916 aa24.11■■□□□ 1.45
SBF1-203ENST00000399627 DLG5Q8TDM6 1919 aa24.1■■□□□ 1.45
SBF1-203ENST00000399627 ERVV-2B6SEH9 535 aa24.1■■□□□ 1.45
SBF1-203ENST00000399627 MAP3K5Q99683 1374 aa24.1■■□□□ 1.45
SBF1-203ENST00000399627 ADAMTS7Q9UKP4 1686 aa24.09■■□□□ 1.45
SBF1-203ENST00000399627 RNMTO43148 476 aaKnown RBP24.09■■□□□ 1.45
SBF1-203ENST00000399627 DIEXFQ68CQ4 756 aaKnown RBP24.09■■□□□ 1.45
SBF1-203ENST00000399627 PIGBQ92521 554 aa24.09■■□□□ 1.45
SBF1-203ENST00000399627 LGR6Q9HBX8 967 aa24.09■■□□□ 1.45
SBF1-203ENST00000399627 TMOD3Q9NYL9 352 aa24.09■■□□□ 1.45
SBF1-203ENST00000399627 MAPK8IP3Q9UPT6 1336 aa24.09■■□□□ 1.45
SBF1-203ENST00000399627 RREB1Q92766 1687 aa24.08■■□□□ 1.45
SBF1-203ENST00000399627 GNAT3A8MTJ3 354 aa24.08■■□□□ 1.45
SBF1-203ENST00000399627 CCDC146Q8IYE0 955 aa24.07■■□□□ 1.44
SBF1-203ENST00000399627 CABP4P57796 275 aa24.06■■□□□ 1.44
SBF1-203ENST00000399627 LY75O60449 1722 aa24.05■■□□□ 1.44
SBF1-203ENST00000399627 PNISRQ8TF01 805 aaKnown RBP24.05■■□□□ 1.44
SBF1-203ENST00000399627 NUP188Q5SRE5 1749 aa24.04■■□□□ 1.44
SBF1-203ENST00000399627 NFE2L2Q16236 605 aa24.04■■□□□ 1.44
SBF1-203ENST00000399627 TXNRD1Q16881 649 aa24.04■■□□□ 1.44
SBF1-203ENST00000399627 PROM2Q8N271 834 aa24.04■■□□□ 1.44
SBF1-203ENST00000399627 IL17REQ8NFR9 667 aa24.04■■□□□ 1.44
SBF1-203ENST00000399627 RUNDC1Q96C34 613 aa24.04■■□□□ 1.44
SBF1-203ENST00000399627 NFATC2IPQ8NCF5 419 aa24.03■■□□□ 1.44
SBF1-203ENST00000399627 MRC1P22897 1456 aa24.02■■□□□ 1.44
SBF1-203ENST00000399627 SLC52A2Q9HAB3 445 aa24.02■■□□□ 1.44
SBF1-203ENST00000399627 ASAP1Q9ULH1 1129 aa24.01■■□□□ 1.43
SBF1-203ENST00000399627 PALLDQ8WX93 1383 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms