RNA–Protein interactions for RNA: ENST00000399395.7

SDR39U1-201, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDR39U1, Length 1,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-201ENST00000399395 ARXQ96QS3 562 aa24.64■■□□□ 1.54
SDR39U1-201ENST00000399395 SGIP1Q9BQI5 828 aa24.64■■□□□ 1.54
SDR39U1-201ENST00000399395 SYT17Q9BSW7 474 aa24.64■■□□□ 1.54
SDR39U1-201ENST00000399395 QSER1Q2KHR3 1735 aa24.64■■□□□ 1.53
SDR39U1-201ENST00000399395 PRIM1P49642 420 aaKnown RBP24.62■■□□□ 1.53
SDR39U1-201ENST00000399395 TRIM26Q12899 539 aaPredicted RBP24.62■■□□□ 1.53
SDR39U1-201ENST00000399395 FYB1O15117 783 aa24.61■■□□□ 1.53
SDR39U1-201ENST00000399395 RAPGEF4Q8WZA2 1011 aa24.61■■□□□ 1.53
SDR39U1-201ENST00000399395 AKT1S1Q96B36 256 aa24.61■■□□□ 1.53
SDR39U1-201ENST00000399395 CGNL1Q0VF96 1302 aa24.61■■□□□ 1.53
SDR39U1-201ENST00000399395 LY75O60449 1722 aa24.59■■□□□ 1.53
SDR39U1-201ENST00000399395 SLC16A10Q8TF71 515 aa24.59■■□□□ 1.53
SDR39U1-201ENST00000399395 TFCP2L1Q9NZI6 479 aa24.59■■□□□ 1.53
SDR39U1-201ENST00000399395 NSD2O96028 1365 aa24.58■■□□□ 1.53
SDR39U1-201ENST00000399395 MAP3K5Q99683 1374 aa24.58■■□□□ 1.53
SDR39U1-201ENST00000399395 POLD1P28340 1107 aa24.58■■□□□ 1.53
SDR39U1-201ENST00000399395 USHBP1Q8N6Y0 703 aa24.58■■□□□ 1.53
SDR39U1-201ENST00000399395 FLT4P35916 1363 aa24.57■■□□□ 1.52
SDR39U1-201ENST00000399395 TUBGCP6Q96RT7 1819 aa24.57■■□□□ 1.52
SDR39U1-201ENST00000399395 TATP17735 454 aaPredicted RBP24.57■■□□□ 1.52
SDR39U1-201ENST00000399395 NBPF6Q5VWK0 638 aa24.57■■□□□ 1.52
SDR39U1-201ENST00000399395 NBPF4Q96M43 638 aa24.57■■□□□ 1.52
SDR39U1-201ENST00000399395 INSRP06213 1382 aa24.56■■□□□ 1.52
SDR39U1-201ENST00000399395 PNPLA7Q6ZV29 1317 aa24.56■■□□□ 1.52
SDR39U1-201ENST00000399395 KIF24Q5T7B8 1368 aa24.55■■□□□ 1.52
SDR39U1-201ENST00000399395 KCNQ4P56696 695 aa24.55■■□□□ 1.52
SDR39U1-201ENST00000399395 KLHL34Q8N239 644 aa24.55■■□□□ 1.52
SDR39U1-201ENST00000399395 CCNL1Q9UK58 526 aaPredicted RBP24.55■■□□□ 1.52
SDR39U1-201ENST00000399395 PCDH11XQ9BZA7 1347 aa24.54■■□□□ 1.52
SDR39U1-201ENST00000399395 PCDH11YQ9BZA8 1340 aa24.54■■□□□ 1.52
SDR39U1-201ENST00000399395 CHD4Q14839 1912 aa24.53■■□□□ 1.52
SDR39U1-201ENST00000399395 NSD3Q9BZ95 1437 aa24.52■■□□□ 1.52
SDR39U1-201ENST00000399395 HSP90AB2PQ58FF8 381 aa24.52■■□□□ 1.52
SDR39U1-201ENST00000399395 COL24A1Q17RW2 1714 aa24.5■■□□□ 1.51
SDR39U1-201ENST00000399395 MSH5O43196 834 aa24.49■■□□□ 1.51
SDR39U1-201ENST00000399395 GPR162Q16538 588 aa24.49■■□□□ 1.51
SDR39U1-201ENST00000399395 ZNF784Q8NCA9 323 aaPredicted RBP24.47■■□□□ 1.51
SDR39U1-201ENST00000399395 C5P01031 1676 aa24.46■■□□□ 1.51
SDR39U1-201ENST00000399395 HMGB2P26583 209 aaKnown RBP24.46■■□□□ 1.51
SDR39U1-201ENST00000399395 EMILIN1Q9Y6C2 1016 aa24.46■■□□□ 1.51
SDR39U1-201ENST00000399395 PELP1Q8IZL8 1130 aaKnown RBP24.45■■□□□ 1.5
SDR39U1-201ENST00000399395 CARD14Q9BXL6 1004 aa24.45■■□□□ 1.5
SDR39U1-201ENST00000399395 PKD1L3Q7Z443 1732 aa24.44■■□□□ 1.5
SDR39U1-201ENST00000399395 PALLDQ8WX93 1383 aa24.44■■□□□ 1.5
SDR39U1-201ENST00000399395 PPM1GO15355 546 aaPredicted RBP24.44■■□□□ 1.5
SDR39U1-201ENST00000399395 TIMELESSQ9UNS1 1208 aa24.44■■□□□ 1.5
SDR39U1-201ENST00000399395 ANKRD26Q9UPS8 1709 aa24.44■■□□□ 1.5
SDR39U1-201ENST00000399395 MPRIPQ6WCQ1 1025 aa24.42■■□□□ 1.5
SDR39U1-201ENST00000399395 TOGARAM1Q9Y4F4 1720 aa24.41■■□□□ 1.5
SDR39U1-201ENST00000399395 COL23A1Q86Y22 540 aaPredicted RBP24.41■■□□□ 1.5
SDR39U1-201ENST00000399395 CYP27B1O15528 508 aa24.4■■□□□ 1.5
SDR39U1-201ENST00000399395 SMARCC1Q92922 1105 aaPredicted RBP24.4■■□□□ 1.5
SDR39U1-201ENST00000399395 NCAPD2Q15021 1401 aa24.4■■□□□ 1.5
SDR39U1-201ENST00000399395 ITGB4P16144 1822 aa24.4■■□□□ 1.5
SDR39U1-201ENST00000399395 TAF1LQ8IZX4 1826 aa24.4■■□□□ 1.5
SDR39U1-201ENST00000399395 POLR3GLQ9BT43 218 aa24.39■■□□□ 1.49
SDR39U1-201ENST00000399395 SPG7Q9UQ90 795 aa24.39■■□□□ 1.49
SDR39U1-201ENST00000399395 MSL1Q68DK7 614 aa24.38■■□□□ 1.49
SDR39U1-201ENST00000399395 FLAD1Q8NFF5 587 aa24.38■■□□□ 1.49
SDR39U1-201ENST00000399395 NLGN2Q8NFZ4 835 aa24.38■■□□□ 1.49
SDR39U1-201ENST00000399395 CLSPNQ9HAW4 1339 aa24.37■■□□□ 1.49
SDR39U1-201ENST00000399395 MAP2P11137 1827 aaKnown RBP24.37■■□□□ 1.49
SDR39U1-201ENST00000399395 UTRNP46939 3433 aa24.36■■□□□ 1.49
SDR39U1-201ENST00000399395 AK7Q96M32 723 aa24.36■■□□□ 1.49
SDR39U1-201ENST00000399395 WASHC2AQ641Q2 1341 aa24.35■■□□□ 1.49
SDR39U1-201ENST00000399395 C4BP0C0L5 1744 aa24.35■■□□□ 1.49
SDR39U1-201ENST00000399395 EYA1Q99502 592 aa24.33■■□□□ 1.49
SDR39U1-201ENST00000399395 PCGF6Q9BYE7 350 aa24.33■■□□□ 1.49
SDR39U1-201ENST00000399395 NKX1-1Q15270 411 aaPredicted RBP24.31■■□□□ 1.48
SDR39U1-201ENST00000399395 PIGBQ92521 554 aa24.31■■□□□ 1.48
SDR39U1-201ENST00000399395 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.31■■□□□ 1.48
SDR39U1-201ENST00000399395 TMOD3Q9NYL9 352 aa24.31■■□□□ 1.48
SDR39U1-201ENST00000399395 GRIN3BO60391 1043 aa24.3■■□□□ 1.48
SDR39U1-201ENST00000399395 POLKQ9UBT6 870 aa24.3■■□□□ 1.48
SDR39U1-201ENST00000399395 PHF14O94880 888 aa24.29■■□□□ 1.48
SDR39U1-201ENST00000399395 TNNT2P45379 298 aaPredicted RBP24.29■■□□□ 1.48
SDR39U1-201ENST00000399395 UBR3Q6ZT12 1888 aa24.28■■□□□ 1.48
SDR39U1-201ENST00000399395 IFNL2Q8IZJ0 200 aa24.28■■□□□ 1.48
SDR39U1-201ENST00000399395 LOC102724428A0A0B4J2F2 783 aa24.27■■□□□ 1.48
SDR39U1-201ENST00000399395 SIK1P57059 783 aa24.27■■□□□ 1.48
SDR39U1-201ENST00000399395 PHKG2P15735 406 aa24.26■■□□□ 1.47
SDR39U1-201ENST00000399395 YBX3P16989 372 aaKnown RBP eCLIP24.26■■□□□ 1.47
SDR39U1-201ENST00000399395 EIF4G2P78344 907 aaKnown RBP eCLIP24.26■■□□□ 1.47
SDR39U1-201ENST00000399395 EIF4A2Q14240 407 aaKnown RBP24.26■■□□□ 1.47
SDR39U1-201ENST00000399395 CD2APQ9Y5K6 639 aa24.26■■□□□ 1.47
SDR39U1-201ENST00000399395 PLEKHG2Q9H7P9 1386 aa24.26■■□□□ 1.47
SDR39U1-201ENST00000399395 C1QTNF8P60827 252 aa24.25■■□□□ 1.47
SDR39U1-201ENST00000399395 SENP3-EIF4A1A0A087X0R7 540 aa24.24■■□□□ 1.47
SDR39U1-201ENST00000399395 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.24■■□□□ 1.47
SDR39U1-201ENST00000399395 GIGYF1O75420 1035 aaPredicted RBP24.24■■□□□ 1.47
SDR39U1-201ENST00000399395 SSFA2P28290 1259 aa24.24■■□□□ 1.47
SDR39U1-201ENST00000399395 LINC00116Q8NCU8 138 aa24.22■■□□□ 1.47
SDR39U1-201ENST00000399395 ASAP1Q9ULH1 1129 aa24.22■■□□□ 1.47
SDR39U1-201ENST00000399395 GNPATO15228 680 aa24.21■■□□□ 1.47
SDR39U1-201ENST00000399395 HSPA5P11021 654 aaKnown RBP24.21■■□□□ 1.47
SDR39U1-201ENST00000399395 AMIGO3Q86WK7 504 aa24.21■■□□□ 1.47
SDR39U1-201ENST00000399395 IGSF1Q8N6C5 1336 aa24.2■■□□□ 1.46
SDR39U1-201ENST00000399395 ATP6V1AP38606 617 aa24.2■■□□□ 1.46
SDR39U1-201ENST00000399395 SMIM5Q71RC9 77 aa24.19■■□□□ 1.46
SDR39U1-201ENST00000399395 PANK3Q9H999 370 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms