RNA–Protein interactions for RNA: ENST00000399367.7

ITSN1-212, Transcript of intersectin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ITSN1, Length 5,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-212ENST00000399367 LARP1BQ659C4 914 aaKnown RBP17.69■□□□□ 0.42
ITSN1-212ENST00000399367 ARGLU1Q9NWB6 273 aaPredicted RBP17.69■□□□□ 0.42
ITSN1-212ENST00000399367 PHF8Q9UPP1 1060 aa17.69■□□□□ 0.42
ITSN1-212ENST00000399367 NOL7Q9UMY1 257 aaKnown RBP17.69■□□□□ 0.42
ITSN1-212ENST00000399367 EXOC6BQ9Y2D4 811 aa17.69■□□□□ 0.42
ITSN1-212ENST00000399367 TMPOP42166 694 aaKnown RBP17.69■□□□□ 0.42
ITSN1-212ENST00000399367 FBXO31Q5XUX0 539 aaPredicted RBP17.69■□□□□ 0.42
ITSN1-212ENST00000399367 CHD1LQ86WJ1 897 aa17.69■□□□□ 0.42
ITSN1-212ENST00000399367 JAKMIP1Q96N16 626 aaKnown RBP17.69■□□□□ 0.42
ITSN1-212ENST00000399367 MYD88Q99836 296 aa17.69■□□□□ 0.42
ITSN1-212ENST00000399367 MBD3O95983 291 aa17.68■□□□□ 0.42
ITSN1-212ENST00000399367 CT47B1P0C2W7 299 aaPredicted RBP17.68■□□□□ 0.42
ITSN1-212ENST00000399367 CHMP4BP1P59074 171 aa17.68■□□□□ 0.42
ITSN1-212ENST00000399367 NME9Q86XW9 330 aa17.68■□□□□ 0.42
ITSN1-212ENST00000399367 PIP4K2AP48426 406 aaPredicted RBP17.68■□□□□ 0.42
ITSN1-212ENST00000399367 TEX35Q5T0J7 233 aa17.68■□□□□ 0.42
ITSN1-212ENST00000399367 TOPBP1Q92547 1522 aa17.68■□□□□ 0.42
ITSN1-212ENST00000399367 EHBP1L1Q8N3D4 1523 aa17.68■□□□□ 0.42
ITSN1-212ENST00000399367 CD109Q6YHK3 1445 aa17.68■□□□□ 0.42
ITSN1-212ENST00000399367 CAVIN4Q5BKX8 364 aa17.68■□□□□ 0.42
ITSN1-212ENST00000399367 CRACR2BQ8N4Y2 399 aaPredicted RBP17.68■□□□□ 0.42
ITSN1-212ENST00000399367 ERICH3Q5RHP9 1530 aa17.68■□□□□ 0.42
ITSN1-212ENST00000399367 LETM1O95202 739 aaPredicted RBP17.67■□□□□ 0.42
ITSN1-212ENST00000399367 SERPINC1P01008 464 aa17.67■□□□□ 0.42
ITSN1-212ENST00000399367 TRAK2O60296 914 aa17.67■□□□□ 0.42
ITSN1-212ENST00000399367 HSP90B2PQ58FF3 399 aa17.67■□□□□ 0.42
ITSN1-212ENST00000399367 STIM1Q13586 685 aa17.67■□□□□ 0.42
ITSN1-212ENST00000399367 POLR3DP05423 398 aaPredicted RBP17.67■□□□□ 0.42
ITSN1-212ENST00000399367 MATR3P43243 847 aaKnown RBP eCLIP17.67■□□□□ 0.42
ITSN1-212ENST00000399367 PDRG1Q9NUG6 133 aa17.66■□□□□ 0.42
ITSN1-212ENST00000399367 POLA1P09884 1462 aaPredicted RBP17.66■□□□□ 0.42
ITSN1-212ENST00000399367 MINDY4BA8MYZ0 360 aa17.66■□□□□ 0.42
ITSN1-212ENST00000399367 HMGB2P26583 209 aaKnown RBP17.66■□□□□ 0.42
ITSN1-212ENST00000399367 ACBD3Q9H3P7 528 aa17.66■□□□□ 0.42
ITSN1-212ENST00000399367 BRPF3Q9ULD4 1205 aa17.66■□□□□ 0.42
ITSN1-212ENST00000399367 PAXIP1Q6ZW49 1069 aaPredicted RBP17.66■□□□□ 0.42
ITSN1-212ENST00000399367 ZNHIT6Q9NWK9 470 aaKnown RBP17.66■□□□□ 0.42
ITSN1-212ENST00000399367 CDKL5O76039 1030 aa17.66■□□□□ 0.42
ITSN1-212ENST00000399367 DAPK1P53355 1430 aa17.65■□□□□ 0.42
ITSN1-212ENST00000399367 IFIT1P09914 478 aaKnown RBP17.65■□□□□ 0.42
ITSN1-212ENST00000399367 TSPY26PQ9H489 355 aa17.65■□□□□ 0.42
ITSN1-212ENST00000399367 BMP2KQ9NSY1 1161 aaPredicted RBP17.65■□□□□ 0.42
ITSN1-212ENST00000399367 TRMT112Q9UI30 125 aaKnown RBP17.65■□□□□ 0.42
ITSN1-212ENST00000399367 AEBP1Q8IUX7 1158 aa17.65■□□□□ 0.42
ITSN1-212ENST00000399367 EXOC5O00471 708 aa17.65■□□□□ 0.42
ITSN1-212ENST00000399367 LARP1Q6PKG0 1096 aaKnown RBP17.65■□□□□ 0.42
ITSN1-212ENST00000399367 IMMTQ16891 758 aaKnown RBP17.64■□□□□ 0.41
ITSN1-212ENST00000399367 TTLL12Q14166 644 aaPredicted RBP17.64■□□□□ 0.41
ITSN1-212ENST00000399367 DEF6Q9H4E7 631 aa17.64■□□□□ 0.41
ITSN1-212ENST00000399367 SPC24Q8NBT2 197 aa17.64■□□□□ 0.41
ITSN1-212ENST00000399367 MKNK2Q9HBH9 465 aa17.64■□□□□ 0.41
ITSN1-212ENST00000399367 CCDC39Q9UFE4 941 aa17.64■□□□□ 0.41
ITSN1-212ENST00000399367 TAF7Q15545 349 aaPredicted RBP17.63■□□□□ 0.41
ITSN1-212ENST00000399367 TMEM57Q8N5G2 664 aa17.63■□□□□ 0.41
ITSN1-212ENST00000399367 KRT85P78386 507 aa17.63■□□□□ 0.41
ITSN1-212ENST00000399367 RPAP2Q8IXW5 612 aaPredicted RBP17.63■□□□□ 0.41
ITSN1-212ENST00000399367 AKAP2Q9Y2D5 859 aa17.63■□□□□ 0.41
ITSN1-212ENST00000399367 WDR78Q5VTH9 848 aa17.63■□□□□ 0.41
ITSN1-212ENST00000399367 TNMDQ9H2S6 317 aa17.63■□□□□ 0.41
ITSN1-212ENST00000399367 CC2D2AQ9P2K1 1620 aa17.63■□□□□ 0.41
ITSN1-212ENST00000399367 AMOTQ4VCS5 1084 aa17.63■□□□□ 0.41
ITSN1-212ENST00000399367 DZIP1Q86YF9 867 aaKnown RBP17.63■□□□□ 0.41
ITSN1-212ENST00000399367 RPGRQ92834 1020 aaKnown RBP17.63■□□□□ 0.41
ITSN1-212ENST00000399367 EMILIN1Q9Y6C2 1016 aa17.63■□□□□ 0.41
ITSN1-212ENST00000399367 GPTP24298 496 aa17.63■□□□□ 0.41
ITSN1-212ENST00000399367 DDX11Q96FC9 970 aa17.62■□□□□ 0.41
ITSN1-212ENST00000399367 MYO6Q9UM54 1294 aa17.62■□□□□ 0.41
ITSN1-212ENST00000399367 IFIT5Q13325 482 aaKnown RBP17.62■□□□□ 0.41
ITSN1-212ENST00000399367 SEPT11Q9NVA2 429 aaKnown RBP17.62■□□□□ 0.41
ITSN1-212ENST00000399367 AKNAQ7Z591 1439 aa17.62■□□□□ 0.41
ITSN1-212ENST00000399367 BOLA2Q9H3K6 86 aa17.62■□□□□ 0.41
ITSN1-212ENST00000399367 EFCAB5A4FU69 1503 aa17.62■□□□□ 0.41
ITSN1-212ENST00000399367 WDR33Q9C0J8 1336 aaKnown RBP17.62■□□□□ 0.41
ITSN1-212ENST00000399367 ARHGEF11O15085 1522 aa17.61■□□□□ 0.41
ITSN1-212ENST00000399367 MYCNP04198 464 aaPredicted RBP17.61■□□□□ 0.41
ITSN1-212ENST00000399367 PPFIBP1Q86W92 1011 aa17.61■□□□□ 0.41
ITSN1-212ENST00000399367 NOM1Q5C9Z4 860 aaKnown RBP17.61■□□□□ 0.41
ITSN1-212ENST00000399367 SYNJ1O43426 1573 aa17.61■□□□□ 0.41
ITSN1-212ENST00000399367 HECW1Q76N89 1606 aa17.61■□□□□ 0.41
ITSN1-212ENST00000399367 KRT32Q14532 448 aa17.6■□□□□ 0.41
ITSN1-212ENST00000399367 KRT28Q7Z3Y7 464 aa17.6■□□□□ 0.41
ITSN1-212ENST00000399367 ZNF287Q9HBT7 754 aa17.6■□□□□ 0.41
ITSN1-212ENST00000399367 DACH1Q9UI36 760 aa17.6■□□□□ 0.41
ITSN1-212ENST00000399367 IL27Q8NEV9 243 aa17.6■□□□□ 0.41
ITSN1-212ENST00000399367 ZBTB3Q9H5J0 574 aa17.6■□□□□ 0.41
ITSN1-212ENST00000399367 CDK13Q14004 1512 aaKnown RBP17.6■□□□□ 0.41
ITSN1-212ENST00000399367 KIF1BPQ96EK5 621 aa17.6■□□□□ 0.41
ITSN1-212ENST00000399367 K7ELQ4 463 aaPredicted RBP17.6■□□□□ 0.41
ITSN1-212ENST00000399367 C6orf229H3BNL8 230 aa17.59■□□□□ 0.41
ITSN1-212ENST00000399367 SPATA32Q96LK8 384 aa17.59■□□□□ 0.41
ITSN1-212ENST00000399367 EPRSP07814 1512 aaKnown RBP17.59■□□□□ 0.41
ITSN1-212ENST00000399367 F6X3S4 739 aa17.59■□□□□ 0.41
ITSN1-212ENST00000399367 SMARCA5O60264 1052 aaPredicted RBP17.59■□□□□ 0.41
ITSN1-212ENST00000399367 WDHD1O75717 1129 aaPredicted RBP17.59■□□□□ 0.41
ITSN1-212ENST00000399367 CASTP20810 708 aaKnown RBP17.59■□□□□ 0.41
ITSN1-212ENST00000399367 MPNDQ8N594 471 aa17.59■□□□□ 0.41
ITSN1-212ENST00000399367 PPP6R1Q9UPN7 881 aa17.59■□□□□ 0.41
ITSN1-212ENST00000399367 SEC63Q9UGP8 760 aaKnown RBP17.59■□□□□ 0.41
ITSN1-212ENST00000399367 CCDC192P0DO97 292 aa17.59■□□□□ 0.41
ITSN1-212ENST00000399367 IDI1Q13907 227 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms