RNA–Protein interactions for RNA: ENST00000399355.6

ITSN1-211, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-211ENST00000399355 AEBP2Q6ZN18 517 aaPredicted RBP14.67□□□□□ -0.06
ITSN1-211ENST00000399355 PLEKHM2Q8IWE5 1019 aa14.67□□□□□ -0.06
ITSN1-211ENST00000399355 KNDC1Q76NI1 1749 aa14.66□□□□□ -0.06
ITSN1-211ENST00000399355 HSP90AB1P08238 724 aaKnown RBP14.66□□□□□ -0.06
ITSN1-211ENST00000399355 PNMA6EA0A0J9YXQ4 647 aa14.66□□□□□ -0.06
ITSN1-211ENST00000399355 ABTB2Q8N961 1025 aa14.66□□□□□ -0.06
ITSN1-211ENST00000399355 PUS7Q96PZ0 661 aaKnown RBP14.66□□□□□ -0.06
ITSN1-211ENST00000399355 SSFA2P28290 1259 aa14.66□□□□□ -0.06
ITSN1-211ENST00000399355 TMEM2Q9UHN6 1383 aa14.65□□□□□ -0.06
ITSN1-211ENST00000399355 DDX54Q8TDD1 881 aaKnown RBP14.65□□□□□ -0.06
ITSN1-211ENST00000399355 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.65□□□□□ -0.06
ITSN1-211ENST00000399355 ALDH1L2Q3SY69 923 aa14.65□□□□□ -0.06
ITSN1-211ENST00000399355 HSCBQ8IWL3 235 aa14.65□□□□□ -0.06
ITSN1-211ENST00000399355 IL25Q9H293 177 aa14.65□□□□□ -0.06
ITSN1-211ENST00000399355 LGR6Q9HBX8 967 aa14.65□□□□□ -0.06
ITSN1-211ENST00000399355 ABCC4O15439 1325 aa14.65□□□□□ -0.06
ITSN1-211ENST00000399355 ADAMTS13Q76LX8 1427 aa14.64□□□□□ -0.07
ITSN1-211ENST00000399355 ZGPATQ8N5A5 531 aaKnown RBP14.64□□□□□ -0.07
ITSN1-211ENST00000399355 EIF5BO60841 1220 aaKnown RBP14.64□□□□□ -0.07
ITSN1-211ENST00000399355 MCM4P33991 863 aa14.64□□□□□ -0.07
ITSN1-211ENST00000399355 FKBP5Q13451 457 aaPredicted RBP14.64□□□□□ -0.07
ITSN1-211ENST00000399355 CEP85Q6P2H3 762 aa14.64□□□□□ -0.07
ITSN1-211ENST00000399355 IL16Q14005 1332 aa14.64□□□□□ -0.07
ITSN1-211ENST00000399355 JARID2Q92833 1246 aaPredicted RBP14.63□□□□□ -0.07
ITSN1-211ENST00000399355 TNPO1Q92973 898 aaKnown RBP14.63□□□□□ -0.07
ITSN1-211ENST00000399355 SDSP20132 328 aa14.63□□□□□ -0.07
ITSN1-211ENST00000399355 UNC5CLQ8IV45 518 aa14.63□□□□□ -0.07
ITSN1-211ENST00000399355 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.63□□□□□ -0.07
ITSN1-211ENST00000399355 ZNF692Q9BU19 519 aaPredicted RBP14.63□□□□□ -0.07
ITSN1-211ENST00000399355 SETD1AO15047 1707 aaKnown RBP14.63□□□□□ -0.07
ITSN1-211ENST00000399355 CEP170BQ9Y4F5 1589 aaPredicted RBP14.62□□□□□ -0.07
ITSN1-211ENST00000399355 PEAK1Q9H792 1746 aa14.62□□□□□ -0.07
ITSN1-211ENST00000399355 CHL1O00533 1208 aa14.62□□□□□ -0.07
ITSN1-211ENST00000399355 GAS2L3Q86XJ1 694 aa14.62□□□□□ -0.07
ITSN1-211ENST00000399355 IL17REQ8NFR9 667 aa14.62□□□□□ -0.07
ITSN1-211ENST00000399355 TRAK2O60296 914 aa14.61□□□□□ -0.07
ITSN1-211ENST00000399355 XRCC6P12956 609 aaKnown RBP eCLIP14.61□□□□□ -0.07
ITSN1-211ENST00000399355 RTF1Q92541 710 aaKnown RBP14.61□□□□□ -0.07
ITSN1-211ENST00000399355 MPRIPQ6WCQ1 1025 aa14.61□□□□□ -0.07
ITSN1-211ENST00000399355 NUTM1Q86Y26 1132 aa14.61□□□□□ -0.07
ITSN1-211ENST00000399355 RRAGDQ9NQL2 400 aaPredicted RBP14.61□□□□□ -0.07
ITSN1-211ENST00000399355 RGS12O14924 1447 aa14.6□□□□□ -0.07
ITSN1-211ENST00000399355 RILPL2Q969X0 211 aa14.6□□□□□ -0.07
ITSN1-211ENST00000399355 ANKRD26Q9UPS8 1709 aa14.6□□□□□ -0.07
ITSN1-211ENST00000399355 ORAI2Q96SN7 254 aa14.6□□□□□ -0.07
ITSN1-211ENST00000399355 PNNQ9H307 717 aaKnown RBP14.6□□□□□ -0.07
ITSN1-211ENST00000399355 CT47B1P0C2W7 299 aaPredicted RBP14.59□□□□□ -0.07
ITSN1-211ENST00000399355 BMP2KLQ5H9B9 411 aa14.59□□□□□ -0.07
ITSN1-211ENST00000399355 UPF3BQ9BZI7 483 aaKnown RBP14.59□□□□□ -0.07
ITSN1-211ENST00000399355 PALD1Q9ULE6 856 aa14.59□□□□□ -0.07
ITSN1-211ENST00000399355 LRRFIP2Q9Y608 721 aaKnown RBP14.58□□□□□ -0.07
ITSN1-211ENST00000399355 USP6P35125 1406 aa14.58□□□□□ -0.08
ITSN1-211ENST00000399355 NCLP19338 710 aaKnown RBP14.58□□□□□ -0.08
ITSN1-211ENST00000399355 ESCO1Q5FWF5 840 aa14.58□□□□□ -0.08
ITSN1-211ENST00000399355 MPNDQ8N594 471 aa14.58□□□□□ -0.08
ITSN1-211ENST00000399355 SPATA31D1Q6ZQQ2 1576 aa14.58□□□□□ -0.08
ITSN1-211ENST00000399355 RTL1A6NKG5 1358 aa14.58□□□□□ -0.08
ITSN1-211ENST00000399355 ATP10DQ9P241 1426 aa14.58□□□□□ -0.08
ITSN1-211ENST00000399355 COL9A3Q14050 684 aaPredicted RBP14.57□□□□□ -0.08
ITSN1-211ENST00000399355 CCDC9Q9Y3X0 531 aaKnown RBP14.57□□□□□ -0.08
ITSN1-211ENST00000399355 NBPF6Q5VWK0 638 aa14.57□□□□□ -0.08
ITSN1-211ENST00000399355 NBPF4Q96M43 638 aa14.57□□□□□ -0.08
ITSN1-211ENST00000399355 CDK12Q9NYV4 1490 aaPredicted RBP14.57□□□□□ -0.08
ITSN1-211ENST00000399355 TRIM6-TRIM34B2RNG4 842 aa14.57□□□□□ -0.08
ITSN1-211ENST00000399355 EID1Q9Y6B2 187 aa14.57□□□□□ -0.08
ITSN1-211ENST00000399355 CPA1P15085 419 aa14.57□□□□□ -0.08
ITSN1-211ENST00000399355 DCTPP1Q9H773 170 aa14.56□□□□□ -0.08
ITSN1-211ENST00000399355 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.56□□□□□ -0.08
ITSN1-211ENST00000399355 PTCH1Q13635 1447 aa14.56□□□□□ -0.08
ITSN1-211ENST00000399355 NBPF7P0C2Y1 421 aaPredicted RBP14.56□□□□□ -0.08
ITSN1-211ENST00000399355 API5Q9BZZ5 524 aaKnown RBP14.56□□□□□ -0.08
ITSN1-211ENST00000399355 TTC22Q5TAA0 569 aa14.56□□□□□ -0.08
ITSN1-211ENST00000399355 CDC42BPGQ6DT37 1551 aa14.56□□□□□ -0.08
ITSN1-211ENST00000399355 HOXC9P31274 260 aa14.55□□□□□ -0.08
ITSN1-211ENST00000399355 FLIIQ13045 1269 aa14.55□□□□□ -0.08
ITSN1-211ENST00000399355 PROSER3Q2NL68 480 aa14.55□□□□□ -0.08
ITSN1-211ENST00000399355 CABLES1Q8TDN4 633 aa14.55□□□□□ -0.08
ITSN1-211ENST00000399355 CHMP5Q9NZZ3 219 aa14.55□□□□□ -0.08
ITSN1-211ENST00000399355 GDPD2Q9HCC8 539 aa14.55□□□□□ -0.08
ITSN1-211ENST00000399355 ZC3H6P61129 1189 aaKnown RBP14.55□□□□□ -0.08
ITSN1-211ENST00000399355 ANKRD44Q8N8A2 993 aa14.55□□□□□ -0.08
ITSN1-211ENST00000399355 RBM27Q9P2N5 1060 aaKnown RBP14.55□□□□□ -0.08
ITSN1-211ENST00000399355 GCC1Q96CN9 775 aa14.54□□□□□ -0.08
ITSN1-211ENST00000399355 AIMP1Q12904 312 aaKnown RBP14.54□□□□□ -0.08
ITSN1-211ENST00000399355 RBM25P49756 843 aaKnown RBP14.54□□□□□ -0.08
ITSN1-211ENST00000399355 KIF13AQ9H1H9 1805 aa14.54□□□□□ -0.08
ITSN1-211ENST00000399355 CRB1P82279 1406 aa14.53□□□□□ -0.08
ITSN1-211ENST00000399355 CHGBP05060 677 aa14.53□□□□□ -0.08
ITSN1-211ENST00000399355 KLHDC4Q8TBB5 520 aa14.53□□□□□ -0.08
ITSN1-211ENST00000399355 NDUFB9Q9Y6M9 179 aa14.53□□□□□ -0.08
ITSN1-211ENST00000399355 OVOS2A0A0J9YW53 1432 aa14.53□□□□□ -0.08
ITSN1-211ENST00000399355 OVOS2Q6IE36 1432 aa14.53□□□□□ -0.08
ITSN1-211ENST00000399355 INTS3Q68E01 1043 aaKnown RBP14.53□□□□□ -0.08
ITSN1-211ENST00000399355 CHPF2Q9P2E5 772 aa14.53□□□□□ -0.08
ITSN1-211ENST00000399355 NSFL1CQ9UNZ2 370 aaKnown RBP14.53□□□□□ -0.08
ITSN1-211ENST00000399355 CDC45O75419 566 aa14.53□□□□□ -0.08
ITSN1-211ENST00000399355 SLC39A6Q13433 755 aa14.53□□□□□ -0.08
ITSN1-211ENST00000399355 MCTP1Q6DN14 999 aa14.52□□□□□ -0.08
ITSN1-211ENST00000399355 PA2G4Q9UQ80 394 aaKnown RBP14.52□□□□□ -0.08
ITSN1-211ENST00000399355 LMOD3Q0VAK6 560 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms