RNA–Protein interactions for RNA: ENST00000399027.3

CYCSP55-201, Transcript of cytochrome c, somatic pseudogene 55, humanhuman

BASIC

Gene CYCSP55, Length 311 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP55-201ENST00000399027 EP400Q96L91 3159 aa14.08□□□□□ -0.16
CYCSP55-201ENST00000399027 BCL9O00512 1426 aa14.07□□□□□ -0.16
CYCSP55-201ENST00000399027 CFAP53Q96M91 514 aa14.07□□□□□ -0.16
CYCSP55-201ENST00000399027 NHSQ6T4R5 1651 aa14.07□□□□□ -0.16
CYCSP55-201ENST00000399027 DOT1LQ8TEK3 1739 aa14.07□□□□□ -0.16
CYCSP55-201ENST00000399027 EXOC5O00471 708 aa14.06□□□□□ -0.16
CYCSP55-201ENST00000399027 PDE3BQ13370 1112 aa14.06□□□□□ -0.16
CYCSP55-201ENST00000399027 NCBP3Q53F19 620 aaKnown RBP14.06□□□□□ -0.16
CYCSP55-201ENST00000399027 RAPGEF4Q8WZA2 1011 aa14.06□□□□□ -0.16
CYCSP55-201ENST00000399027 TATP17735 454 aaPredicted RBP14.05□□□□□ -0.16
CYCSP55-201ENST00000399027 TOGARAM1Q9Y4F4 1720 aa14.04□□□□□ -0.16
CYCSP55-201ENST00000399027 ITGB4P16144 1822 aa14.04□□□□□ -0.16
CYCSP55-201ENST00000399027 RGPD3A6NKT7 1758 aaPredicted RBP14.04□□□□□ -0.16
CYCSP55-201ENST00000399027 RGPD4Q7Z3J3 1758 aa14.04□□□□□ -0.16
CYCSP55-201ENST00000399027 SOCS7O14512 581 aa14.03□□□□□ -0.16
CYCSP55-201ENST00000399027 SULT6B1Q6IMI4 303 aa14.03□□□□□ -0.16
CYCSP55-201ENST00000399027 MARCH10Q8NA82 808 aaPredicted RBP14.03□□□□□ -0.16
CYCSP55-201ENST00000399027 ZCRB1Q8TBF4 217 aaKnown RBP14.03□□□□□ -0.16
CYCSP55-201ENST00000399027 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.03□□□□□ -0.16
CYCSP55-201ENST00000399027 SCN11AQ9UI33 1791 aa14.02□□□□□ -0.16
CYCSP55-201ENST00000399027 FAM182BQ5T319 152 aa14.02□□□□□ -0.17
CYCSP55-201ENST00000399027 FAM196AQ6ZSG2 479 aa14.02□□□□□ -0.17
CYCSP55-201ENST00000399027 AEBP1Q8IUX7 1158 aa14.02□□□□□ -0.17
CYCSP55-201ENST00000399027 ADAMTS7Q9UKP4 1686 aa14.01□□□□□ -0.17
CYCSP55-201ENST00000399027 PCDH11XQ9BZA7 1347 aa14.01□□□□□ -0.17
CYCSP55-201ENST00000399027 PCDH11YQ9BZA8 1340 aa14.01□□□□□ -0.17
CYCSP55-201ENST00000399027 UPF1Q92900 1129 aaKnown RBP eCLIP14.01□□□□□ -0.17
CYCSP55-201ENST00000399027 NUDCQ9Y266 331 aa14.01□□□□□ -0.17
CYCSP55-201ENST00000399027 BTAF1O14981 1849 aa14.01□□□□□ -0.17
CYCSP55-201ENST00000399027 DLG5Q8TDM6 1919 aa14□□□□□ -0.17
CYCSP55-201ENST00000399027 ANP32CO43423 234 aa14□□□□□ -0.17
CYCSP55-201ENST00000399027 SPG7Q9UQ90 795 aa14□□□□□ -0.17
CYCSP55-201ENST00000399027 U2SURPO15042 1029 aaKnown RBP13.99□□□□□ -0.17
CYCSP55-201ENST00000399027 HMOX1P09601 288 aa13.99□□□□□ -0.17
CYCSP55-201ENST00000399027 CCDC125Q86Z20 511 aa13.99□□□□□ -0.17
CYCSP55-201ENST00000399027 CYP27B1O15528 508 aa13.98□□□□□ -0.17
CYCSP55-201ENST00000399027 AMOTQ4VCS5 1084 aa13.98□□□□□ -0.17
CYCSP55-201ENST00000399027 RSPH6AQ9H0K4 717 aa13.98□□□□□ -0.17
CYCSP55-201ENST00000399027 RREB1Q92766 1687 aa13.98□□□□□ -0.17
CYCSP55-201ENST00000399027 FCHSD2O94868 740 aa13.97□□□□□ -0.17
CYCSP55-201ENST00000399027 NKX1-1Q15270 411 aaPredicted RBP13.97□□□□□ -0.17
CYCSP55-201ENST00000399027 PLEKHO1Q53GL0 409 aaPredicted RBP13.97□□□□□ -0.17
CYCSP55-201ENST00000399027 DDX54Q8TDD1 881 aaKnown RBP13.97□□□□□ -0.17
CYCSP55-201ENST00000399027 LY75O60449 1722 aa13.97□□□□□ -0.17
CYCSP55-201ENST00000399027 KAT6BQ8WYB5 2073 aa13.97□□□□□ -0.17
CYCSP55-201ENST00000399027 U2AF1L5P0DN76 240 aaPredicted RBP13.96□□□□□ -0.17
CYCSP55-201ENST00000399027 PHKG2P15735 406 aa13.96□□□□□ -0.17
CYCSP55-201ENST00000399027 U2AF1Q01081 240 aaKnown RBP eCLIP13.96□□□□□ -0.17
CYCSP55-201ENST00000399027 IFNL2Q8IZJ0 200 aa13.96□□□□□ -0.17
CYCSP55-201ENST00000399027 SIPA1L3O60292 1781 aaPredicted RBP13.96□□□□□ -0.18
CYCSP55-201ENST00000399027 TRIM37O94972 964 aa13.94□□□□□ -0.18
CYCSP55-201ENST00000399027 NUP188Q5SRE5 1749 aa13.93□□□□□ -0.18
CYCSP55-201ENST00000399027 KDM6AO15550 1401 aaPredicted RBP13.93□□□□□ -0.18
CYCSP55-201ENST00000399027 PRKAR2BP31323 418 aa13.93□□□□□ -0.18
CYCSP55-201ENST00000399027 PLEKHF1Q96S99 279 aa13.93□□□□□ -0.18
CYCSP55-201ENST00000399027 BCL11BQ9C0K0 894 aaPredicted RBP13.93□□□□□ -0.18
CYCSP55-201ENST00000399027 PAPPAQ13219 1627 aa13.93□□□□□ -0.18
CYCSP55-201ENST00000399027 MRC1P22897 1456 aa13.93□□□□□ -0.18
CYCSP55-201ENST00000399027 HSP90AB1P08238 724 aaKnown RBP13.92□□□□□ -0.18
CYCSP55-201ENST00000399027 MTHFSDQ2M296 383 aaKnown RBP13.92□□□□□ -0.18
CYCSP55-201ENST00000399027 CCDC184Q52MB2 194 aa13.92□□□□□ -0.18
CYCSP55-201ENST00000399027 AKAP4Q5JQC9 854 aa13.92□□□□□ -0.18
CYCSP55-201ENST00000399027 ZNF530Q6P9A1 599 aaPredicted RBP13.92□□□□□ -0.18
CYCSP55-201ENST00000399027 KCNQ2O43526 872 aa13.91□□□□□ -0.18
CYCSP55-201ENST00000399027 SF3B2Q13435 895 aaKnown RBP13.91□□□□□ -0.18
CYCSP55-201ENST00000399027 C1orf141Q5JVX7 400 aa13.91□□□□□ -0.18
CYCSP55-201ENST00000399027 PTF1AQ7RTS3 328 aa13.91□□□□□ -0.18
CYCSP55-201ENST00000399027 ACSBG1Q96GR2 724 aa13.91□□□□□ -0.18
CYCSP55-201ENST00000399027 DCAF5Q96JK2 942 aa13.91□□□□□ -0.18
CYCSP55-201ENST00000399027 PHACTR3Q96KR7 559 aa13.91□□□□□ -0.18
CYCSP55-201ENST00000399027 PNNQ9H307 717 aaKnown RBP13.91□□□□□ -0.18
CYCSP55-201ENST00000399027 GAS2L2Q8NHY3 880 aa13.9□□□□□ -0.18
CYCSP55-201ENST00000399027 ZNF831Q5JPB2 1677 aa13.9□□□□□ -0.18
CYCSP55-201ENST00000399027 TAF1LQ8IZX4 1826 aa13.9□□□□□ -0.18
CYCSP55-201ENST00000399027 MAP3K5Q99683 1374 aa13.89□□□□□ -0.19
CYCSP55-201ENST00000399027 PLSCR1O15162 318 aa13.89□□□□□ -0.19
CYCSP55-201ENST00000399027 BAG6P46379 1132 aa13.89□□□□□ -0.19
CYCSP55-201ENST00000399027 PRIM1P49642 420 aaKnown RBP13.89□□□□□ -0.19
CYCSP55-201ENST00000399027 WDR43Q15061 677 aaKnown RBP eCLIP13.89□□□□□ -0.19
CYCSP55-201ENST00000399027 UBR2Q8IWV8 1755 aa13.88□□□□□ -0.19
CYCSP55-201ENST00000399027 ERVV-2B6SEH9 535 aa13.88□□□□□ -0.19
CYCSP55-201ENST00000399027 APBA3O96018 575 aa13.88□□□□□ -0.19
CYCSP55-201ENST00000399027 DIEXFQ68CQ4 756 aaKnown RBP13.88□□□□□ -0.19
CYCSP55-201ENST00000399027 ADAMTS8Q9UP79 889 aa13.88□□□□□ -0.19
CYCSP55-201ENST00000399027 CICQ96RK0 1608 aaPredicted RBP13.88□□□□□ -0.19
CYCSP55-201ENST00000399027 DEFB132Q7Z7B7 95 aa13.87□□□□□ -0.19
CYCSP55-201ENST00000399027 PNISRQ8TF01 805 aaKnown RBP13.87□□□□□ -0.19
CYCSP55-201ENST00000399027 CAMKK2Q96RR4 588 aa13.87□□□□□ -0.19
CYCSP55-201ENST00000399027 MRS2Q9HD23 443 aa13.87□□□□□ -0.19
CYCSP55-201ENST00000399027 CEMIPQ8WUJ3 1361 aa13.86□□□□□ -0.19
CYCSP55-201ENST00000399027 C5P01031 1676 aa13.86□□□□□ -0.19
CYCSP55-201ENST00000399027 GNAT3A8MTJ3 354 aa13.86□□□□□ -0.19
CYCSP55-201ENST00000399027 NEFMP07197 916 aa13.86□□□□□ -0.19
CYCSP55-201ENST00000399027 MPRIPQ6WCQ1 1025 aa13.86□□□□□ -0.19
CYCSP55-201ENST00000399027 SYTL4Q96C24 671 aaPredicted RBP13.86□□□□□ -0.19
CYCSP55-201ENST00000399027 RNMTO43148 476 aaKnown RBP13.85□□□□□ -0.19
CYCSP55-201ENST00000399027 EN1Q05925 392 aaPredicted RBP13.85□□□□□ -0.19
CYCSP55-201ENST00000399027 RUNDC1Q96C34 613 aa13.85□□□□□ -0.19
CYCSP55-201ENST00000399027 MAPK8IP3Q9UPT6 1336 aa13.85□□□□□ -0.19
CYCSP55-201ENST00000399027 COL5A3P25940 1745 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms