RNA–Protein interactions for RNA: ENST00000398844.6

SEC24A-202, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SEC24A, Length 6,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-202ENST00000398844 RUFY2Q8WXA3 655 aa11.01□□□□□ -0.65
SEC24A-202ENST00000398844 SRCIN1Q9C0H9 1055 aa11.01□□□□□ -0.65
SEC24A-202ENST00000398844 CABP4P57796 275 aa11.01□□□□□ -0.65
SEC24A-202ENST00000398844 TRIM35Q9UPQ4 493 aa11.01□□□□□ -0.65
SEC24A-202ENST00000398844 KDM2BQ8NHM5 1336 aa11.01□□□□□ -0.65
SEC24A-202ENST00000398844 ERVK-7P63135 1459 aa11.01□□□□□ -0.65
SEC24A-202ENST00000398844 SSFA2P28290 1259 aa11□□□□□ -0.65
SEC24A-202ENST00000398844 RSPH6AQ9H0K4 717 aa11□□□□□ -0.65
SEC24A-202ENST00000398844 ZFYVE16Q7Z3T8 1539 aa11□□□□□ -0.65
SEC24A-202ENST00000398844 NUCB1Q02818 461 aa11□□□□□ -0.65
SEC24A-202ENST00000398844 MEIS3Q99687 375 aa11□□□□□ -0.65
SEC24A-202ENST00000398844 ZKSCAN1P17029 563 aaPredicted RBP11□□□□□ -0.65
SEC24A-202ENST00000398844 KIAA2012Q0VF49 1180 aa11□□□□□ -0.65
SEC24A-202ENST00000398844 WASHC4Q2M389 1173 aa11□□□□□ -0.65
SEC24A-202ENST00000398844 LRRC59Q96AG4 307 aaKnown RBP11□□□□□ -0.65
SEC24A-202ENST00000398844 ANO8Q9HCE9 1232 aaPredicted RBP11□□□□□ -0.65
SEC24A-202ENST00000398844 E9PCH4 1651 aa11□□□□□ -0.65
SEC24A-202ENST00000398844 POGZQ7Z3K3 1410 aa10.99□□□□□ -0.65
SEC24A-202ENST00000398844 MTHFSDQ2M296 383 aaKnown RBP10.99□□□□□ -0.65
SEC24A-202ENST00000398844 NASPP49321 788 aaPredicted RBP10.99□□□□□ -0.65
SEC24A-202ENST00000398844 RABEP1Q15276 862 aa10.99□□□□□ -0.65
SEC24A-202ENST00000398844 TTC21BQ7Z4L5 1316 aa10.99□□□□□ -0.65
SEC24A-202ENST00000398844 NUCB2P80303 420 aa10.99□□□□□ -0.65
SEC24A-202ENST00000398844 PTPRTO14522 1441 aa10.99□□□□□ -0.65
SEC24A-202ENST00000398844 TOM1L2Q6ZVM7 507 aa10.99□□□□□ -0.65
SEC24A-202ENST00000398844 ABCC11Q96J66 1382 aa10.99□□□□□ -0.65
SEC24A-202ENST00000398844 TATP17735 454 aaPredicted RBP10.98□□□□□ -0.65
SEC24A-202ENST00000398844 CHAF1AQ13111 956 aaPredicted RBP10.98□□□□□ -0.65
SEC24A-202ENST00000398844 MCM4P33991 863 aa10.98□□□□□ -0.65
SEC24A-202ENST00000398844 TAF7Q15545 349 aaPredicted RBP10.98□□□□□ -0.65
SEC24A-202ENST00000398844 PHF14O94880 888 aa10.98□□□□□ -0.65
SEC24A-202ENST00000398844 MYD88Q99836 296 aa10.98□□□□□ -0.65
SEC24A-202ENST00000398844 CHMP4AQ9BY43 222 aa10.98□□□□□ -0.65
SEC24A-202ENST00000398844 HDAC5Q9UQL6 1122 aa10.98□□□□□ -0.65
SEC24A-202ENST00000398844 CSPP1Q1MSJ5 1256 aa10.98□□□□□ -0.65
SEC24A-202ENST00000398844 CLASRPQ8N2M8 674 aaKnown RBP10.98□□□□□ -0.65
SEC24A-202ENST00000398844 TBC1D32Q96NH3 1257 aa10.98□□□□□ -0.65
SEC24A-202ENST00000398844 GTF2E1P29083 439 aaPredicted RBP10.98□□□□□ -0.65
SEC24A-202ENST00000398844 SF3A1Q15459 793 aaKnown RBP10.97□□□□□ -0.65
SEC24A-202ENST00000398844 FIBPO43427 364 aa10.97□□□□□ -0.65
SEC24A-202ENST00000398844 MX1P20591 662 aa10.97□□□□□ -0.65
SEC24A-202ENST00000398844 RNF123Q5XPI4 1314 aa10.97□□□□□ -0.65
SEC24A-202ENST00000398844 BICD2Q8TD16 824 aa10.97□□□□□ -0.65
SEC24A-202ENST00000398844 UNC13BO14795 1591 aa10.97□□□□□ -0.65
SEC24A-202ENST00000398844 UPF3BQ9BZI7 483 aaKnown RBP10.97□□□□□ -0.65
SEC24A-202ENST00000398844 MSH6P52701 1360 aa10.97□□□□□ -0.65
SEC24A-202ENST00000398844 TNPO1Q92973 898 aaKnown RBP10.97□□□□□ -0.65
SEC24A-202ENST00000398844 CCDC8Q9H0W5 538 aaPredicted RBP10.97□□□□□ -0.65
SEC24A-202ENST00000398844 MAP3K2Q9Y2U5 619 aa10.96□□□□□ -0.65
SEC24A-202ENST00000398844 UHRF1BP1LA0JNW5 1464 aa10.96□□□□□ -0.65
SEC24A-202ENST00000398844 FLIIQ13045 1269 aa10.96□□□□□ -0.65
SEC24A-202ENST00000398844 PHF8Q9UPP1 1060 aa10.96□□□□□ -0.65
SEC24A-202ENST00000398844 ZMYM3Q14202 1370 aa10.96□□□□□ -0.65
SEC24A-202ENST00000398844 CHPF2Q9P2E5 772 aa10.96□□□□□ -0.66
SEC24A-202ENST00000398844 CASTP20810 708 aaKnown RBP10.96□□□□□ -0.66
SEC24A-202ENST00000398844 CHRNA2Q15822 529 aa10.96□□□□□ -0.66
SEC24A-202ENST00000398844 GRPEL1Q9HAV7 217 aa10.96□□□□□ -0.66
SEC24A-202ENST00000398844 HSP90AB4PQ58FF6 505 aa10.95□□□□□ -0.66
SEC24A-202ENST00000398844 JAKMIP1Q96N16 626 aaKnown RBP10.95□□□□□ -0.66
SEC24A-202ENST00000398844 SPG7Q9UQ90 795 aa10.95□□□□□ -0.66
SEC24A-202ENST00000398844 PPFIA3O75145 1194 aa10.95□□□□□ -0.66
SEC24A-202ENST00000398844 VAMP4O75379 141 aa10.95□□□□□ -0.66
SEC24A-202ENST00000398844 RBM27Q9P2N5 1060 aaKnown RBP10.95□□□□□ -0.66
SEC24A-202ENST00000398844 PLXNC1O60486 1568 aa10.95□□□□□ -0.66
SEC24A-202ENST00000398844 NUTM2BA6NNL0 878 aaPredicted RBP10.95□□□□□ -0.66
SEC24A-202ENST00000398844 NUTM2EB1AL46 878 aaPredicted RBP10.95□□□□□ -0.66
SEC24A-202ENST00000398844 G2E3Q7L622 706 aa10.95□□□□□ -0.66
SEC24A-202ENST00000398844 NUTM2AQ8IVF1 878 aaPredicted RBP10.95□□□□□ -0.66
SEC24A-202ENST00000398844 OTUD7AQ8TE49 926 aaPredicted RBP10.95□□□□□ -0.66
SEC24A-202ENST00000398844 DTNBO60941 627 aa10.95□□□□□ -0.66
SEC24A-202ENST00000398844 TTC22Q5TAA0 569 aa10.95□□□□□ -0.66
SEC24A-202ENST00000398844 NFXL1Q6ZNB6 911 aa10.95□□□□□ -0.66
SEC24A-202ENST00000398844 MTMR7Q9Y216 660 aa10.95□□□□□ -0.66
SEC24A-202ENST00000398844 QRICH2Q9H0J4 1663 aa10.95□□□□□ -0.66
SEC24A-202ENST00000398844 ZNF592Q92610 1267 aa10.95□□□□□ -0.66
SEC24A-202ENST00000398844 TET3O43151 1660 aa10.94□□□□□ -0.66
SEC24A-202ENST00000398844 RPAP2Q8IXW5 612 aaPredicted RBP10.94□□□□□ -0.66
SEC24A-202ENST00000398844 BOLA2Q9H3K6 86 aa10.94□□□□□ -0.66
SEC24A-202ENST00000398844 CFAP74Q9C0B2 1584 aa10.94□□□□□ -0.66
SEC24A-202ENST00000398844 MADDQ8WXG6 1647 aa10.94□□□□□ -0.66
SEC24A-202ENST00000398844 PTCD1O75127 700 aaKnown RBP10.94□□□□□ -0.66
SEC24A-202ENST00000398844 TTC39AQ5SRH9 613 aa10.94□□□□□ -0.66
SEC24A-202ENST00000398844 CHMP4CQ96CF2 233 aa10.94□□□□□ -0.66
SEC24A-202ENST00000398844 POLR1AO95602 1720 aaPredicted RBP10.94□□□□□ -0.66
SEC24A-202ENST00000398844 MRE11P49959 708 aa10.94□□□□□ -0.66
SEC24A-202ENST00000398844 CABLES1Q8TDN4 633 aa10.94□□□□□ -0.66
SEC24A-202ENST00000398844 IL13P35225 146 aa10.94□□□□□ -0.66
SEC24A-202ENST00000398844 SLC39A6Q13433 755 aa10.94□□□□□ -0.66
SEC24A-202ENST00000398844 HDAC1Q13547 482 aaPredicted RBP10.94□□□□□ -0.66
SEC24A-202ENST00000398844 PRPF40BQ6NWY9 871 aaKnown RBP10.94□□□□□ -0.66
SEC24A-202ENST00000398844 GDPD2Q9HCC8 539 aa10.94□□□□□ -0.66
SEC24A-202ENST00000398844 HTATSF1O43719 755 aaKnown RBP10.93□□□□□ -0.66
SEC24A-202ENST00000398844 RNF20Q5VTR2 975 aa10.93□□□□□ -0.66
SEC24A-202ENST00000398844 ABCA6Q8N139 1617 aa10.93□□□□□ -0.66
SEC24A-202ENST00000398844 SDSP20132 328 aa10.93□□□□□ -0.66
SEC24A-202ENST00000398844 FKBP4Q02790 459 aaKnown RBP eCLIP10.93□□□□□ -0.66
SEC24A-202ENST00000398844 SPC24Q8NBT2 197 aa10.93□□□□□ -0.66
SEC24A-202ENST00000398844 IL16Q14005 1332 aa10.93□□□□□ -0.66
SEC24A-202ENST00000398844 DDX17Q92841 729 aaKnown RBP10.93□□□□□ -0.66
SEC24A-202ENST00000398844 MAP3K4Q9Y6R4 1608 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms