RNA–Protein interactions for RNA: ENST00000398808.3

VWCE-203, Transcript of von Willebrand factor C and EGF domains, humanhuman

TSL 3

Gene VWCE, Length 717 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWCE-203ENST00000398808 SLC16A10Q8TF71 515 aa22.01■■□□□ 1.11
VWCE-203ENST00000398808 ZCRB1Q8TBF4 217 aaKnown RBP22■■□□□ 1.11
VWCE-203ENST00000398808 FYB1O15117 783 aa21.99■■□□□ 1.11
VWCE-203ENST00000398808 PRIM1P49642 420 aaKnown RBP21.99■■□□□ 1.11
VWCE-203ENST00000398808 SHANK3Q9BYB0 1731 aa21.99■■□□□ 1.11
VWCE-203ENST00000398808 RGPD2P0DJD1 1756 aa21.99■■□□□ 1.11
VWCE-203ENST00000398808 MEGF6O75095 1541 aa21.98■■□□□ 1.11
VWCE-203ENST00000398808 TMF1P82094 1093 aa21.98■■□□□ 1.11
VWCE-203ENST00000398808 NSD2O96028 1365 aa21.98■■□□□ 1.11
VWCE-203ENST00000398808 CGNL1Q0VF96 1302 aa21.97■■□□□ 1.11
VWCE-203ENST00000398808 LY75O60449 1722 aa21.97■■□□□ 1.11
VWCE-203ENST00000398808 COL24A1Q17RW2 1714 aa21.97■■□□□ 1.11
VWCE-203ENST00000398808 DOT1LQ8TEK3 1739 aa21.97■■□□□ 1.11
VWCE-203ENST00000398808 RRS1Q15050 365 aaKnown RBP21.95■■□□□ 1.1
VWCE-203ENST00000398808 NBPF6Q5VWK0 638 aa21.95■■□□□ 1.1
VWCE-203ENST00000398808 SYTL4Q96C24 671 aaPredicted RBP21.95■■□□□ 1.1
VWCE-203ENST00000398808 NBPF4Q96M43 638 aa21.95■■□□□ 1.1
VWCE-203ENST00000398808 PNPLA7Q6ZV29 1317 aa21.95■■□□□ 1.1
VWCE-203ENST00000398808 GGNBP2Q9H3C7 697 aa21.94■■□□□ 1.1
VWCE-203ENST00000398808 USP47Q96K76 1375 aa21.94■■□□□ 1.1
VWCE-203ENST00000398808 CHD4Q14839 1912 aa21.93■■□□□ 1.1
VWCE-203ENST00000398808 TUBGCP6Q96RT7 1819 aa21.92■■□□□ 1.1
VWCE-203ENST00000398808 SMG6Q86US8 1419 aaKnown RBP21.92■■□□□ 1.1
VWCE-203ENST00000398808 ZNF784Q8NCA9 323 aaPredicted RBP21.92■■□□□ 1.1
VWCE-203ENST00000398808 TFCP2L1Q9NZI6 479 aa21.92■■□□□ 1.1
VWCE-203ENST00000398808 INSRP06213 1382 aa21.91■■□□□ 1.1
VWCE-203ENST00000398808 KIF24Q5T7B8 1368 aa21.91■■□□□ 1.1
VWCE-203ENST00000398808 POLD1P28340 1107 aa21.91■■□□□ 1.1
VWCE-203ENST00000398808 KCNQ4P56696 695 aa21.91■■□□□ 1.1
VWCE-203ENST00000398808 CDCA8Q53HL2 280 aa21.91■■□□□ 1.1
VWCE-203ENST00000398808 RAPGEF4Q8WZA2 1011 aa21.9■■□□□ 1.1
VWCE-203ENST00000398808 TATP17735 454 aaPredicted RBP21.89■■□□□ 1.09
VWCE-203ENST00000398808 USHBP1Q8N6Y0 703 aa21.89■■□□□ 1.09
VWCE-203ENST00000398808 CCNL1Q9UK58 526 aaPredicted RBP21.89■■□□□ 1.09
VWCE-203ENST00000398808 KIF20BQ96Q89 1820 aa21.89■■□□□ 1.09
VWCE-203ENST00000398808 HSP90AB2PQ58FF8 381 aa21.88■■□□□ 1.09
VWCE-203ENST00000398808 FLT4P35916 1363 aa21.87■■□□□ 1.09
VWCE-203ENST00000398808 PCDH11XQ9BZA7 1347 aa21.85■■□□□ 1.09
VWCE-203ENST00000398808 PCDH11YQ9BZA8 1340 aa21.85■■□□□ 1.09
VWCE-203ENST00000398808 HMGB2P26583 209 aaKnown RBP21.85■■□□□ 1.09
VWCE-203ENST00000398808 GPR162Q16538 588 aa21.84■■□□□ 1.09
VWCE-203ENST00000398808 CARD14Q9BXL6 1004 aa21.84■■□□□ 1.09
VWCE-203ENST00000398808 COL23A1Q86Y22 540 aaPredicted RBP21.82■■□□□ 1.08
VWCE-203ENST00000398808 NCAPD2Q15021 1401 aa21.81■■□□□ 1.08
VWCE-203ENST00000398808 NSD3Q9BZ95 1437 aa21.8■■□□□ 1.08
VWCE-203ENST00000398808 C5P01031 1676 aa21.8■■□□□ 1.08
VWCE-203ENST00000398808 CYP27B1O15528 508 aa21.8■■□□□ 1.08
VWCE-203ENST00000398808 KLHL34Q8N239 644 aa21.8■■□□□ 1.08
VWCE-203ENST00000398808 EIF4G2P78344 907 aaKnown RBP eCLIP21.79■■□□□ 1.08
VWCE-203ENST00000398808 NLGN2Q8NFZ4 835 aa21.79■■□□□ 1.08
VWCE-203ENST00000398808 EMILIN1Q9Y6C2 1016 aa21.79■■□□□ 1.08
VWCE-203ENST00000398808 PKD1L3Q7Z443 1732 aa21.78■■□□□ 1.08
VWCE-203ENST00000398808 PALLDQ8WX93 1383 aa21.78■■□□□ 1.08
VWCE-203ENST00000398808 MSH5O43196 834 aa21.78■■□□□ 1.08
VWCE-203ENST00000398808 FLAD1Q8NFF5 587 aa21.78■■□□□ 1.08
VWCE-203ENST00000398808 TAF1LQ8IZX4 1826 aa21.78■■□□□ 1.08
VWCE-203ENST00000398808 NKX1-1Q15270 411 aaPredicted RBP21.77■■□□□ 1.08
VWCE-203ENST00000398808 MPRIPQ6WCQ1 1025 aa21.77■■□□□ 1.08
VWCE-203ENST00000398808 ANKRD26Q9UPS8 1709 aa21.77■■□□□ 1.08
VWCE-203ENST00000398808 ITGB4P16144 1822 aa21.76■■□□□ 1.07
VWCE-203ENST00000398808 SMARCC1Q92922 1105 aaPredicted RBP21.76■■□□□ 1.07
VWCE-203ENST00000398808 TOGARAM1Q9Y4F4 1720 aa21.76■■□□□ 1.07
VWCE-203ENST00000398808 WASHC2AQ641Q2 1341 aa21.76■■□□□ 1.07
VWCE-203ENST00000398808 GOLGB1Q14789 3259 aaKnown RBP21.75■■□□□ 1.07
VWCE-203ENST00000398808 HSPA5P11021 654 aaKnown RBP21.75■■□□□ 1.07
VWCE-203ENST00000398808 GRIN3BO60391 1043 aa21.73■■□□□ 1.07
VWCE-203ENST00000398808 C1QTNF8P60827 252 aa21.73■■□□□ 1.07
VWCE-203ENST00000398808 PELP1Q8IZL8 1130 aaKnown RBP21.73■■□□□ 1.07
VWCE-203ENST00000398808 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.73■■□□□ 1.07
VWCE-203ENST00000398808 SPG7Q9UQ90 795 aa21.73■■□□□ 1.07
VWCE-203ENST00000398808 MAP2P11137 1827 aaKnown RBP21.72■■□□□ 1.07
VWCE-203ENST00000398808 MSL1Q68DK7 614 aa21.72■■□□□ 1.07
VWCE-203ENST00000398808 PIGBQ92521 554 aa21.72■■□□□ 1.07
VWCE-203ENST00000398808 C4BP0C0L5 1744 aa21.72■■□□□ 1.07
VWCE-203ENST00000398808 PPM1GO15355 546 aaPredicted RBP21.71■■□□□ 1.07
VWCE-203ENST00000398808 EYA1Q99502 592 aa21.71■■□□□ 1.07
VWCE-203ENST00000398808 CD2APQ9Y5K6 639 aa21.71■■□□□ 1.07
VWCE-203ENST00000398808 YBX3P16989 372 aaKnown RBP eCLIP21.7■■□□□ 1.06
VWCE-203ENST00000398808 POLKQ9UBT6 870 aa21.7■■□□□ 1.06
VWCE-203ENST00000398808 AK7Q96M32 723 aa21.69■■□□□ 1.06
VWCE-203ENST00000398808 UBR3Q6ZT12 1888 aa21.67■■□□□ 1.06
VWCE-203ENST00000398808 PLEKHG2Q9H7P9 1386 aa21.67■■□□□ 1.06
VWCE-203ENST00000398808 LOC102724428A0A0B4J2F2 783 aa21.66■■□□□ 1.06
VWCE-203ENST00000398808 SIK1P57059 783 aa21.66■■□□□ 1.06
VWCE-203ENST00000398808 AMIGO3Q86WK7 504 aa21.66■■□□□ 1.06
VWCE-203ENST00000398808 IFNL2Q8IZJ0 200 aa21.66■■□□□ 1.06
VWCE-203ENST00000398808 PHKG2P15735 406 aa21.65■■□□□ 1.06
VWCE-203ENST00000398808 SSFA2P28290 1259 aa21.65■■□□□ 1.06
VWCE-203ENST00000398808 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.64■■□□□ 1.05
VWCE-203ENST00000398808 GIGYF1O75420 1035 aaPredicted RBP21.64■■□□□ 1.05
VWCE-203ENST00000398808 TMOD3Q9NYL9 352 aa21.64■■□□□ 1.05
VWCE-203ENST00000398808 SENP3-EIF4A1A0A087X0R7 540 aa21.63■■□□□ 1.05
VWCE-203ENST00000398808 EIF4A2Q14240 407 aaKnown RBP21.63■■□□□ 1.05
VWCE-203ENST00000398808 LINC00116Q8NCU8 138 aa21.63■■□□□ 1.05
VWCE-203ENST00000398808 ASAP1Q9ULH1 1129 aa21.62■■□□□ 1.05
VWCE-203ENST00000398808 PHF14O94880 888 aa21.61■■□□□ 1.05
VWCE-203ENST00000398808 ITPK1Q13572 414 aa21.6■■□□□ 1.05
VWCE-203ENST00000398808 SMIM5Q71RC9 77 aa21.6■■□□□ 1.05
VWCE-203ENST00000398808 ATG3Q9NT62 314 aa21.6■■□□□ 1.05
VWCE-203ENST00000398808 IGSF1Q8N6C5 1336 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms