RNA–Protein interactions for RNA: ENST00000398224.3

PDE9A-207, Transcript of phosphodiesterase 9A, humanhuman

TSL 1 (best) BASIC

Gene PDE9A, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE9A-207ENST00000398224 USP8P40818 1118 aa13.32□□□□□ -0.28
PDE9A-207ENST00000398224 WDR43Q15061 677 aaKnown RBP eCLIP13.32□□□□□ -0.28
PDE9A-207ENST00000398224 RNF214Q8ND24 703 aa13.32□□□□□ -0.28
PDE9A-207ENST00000398224 DRC1Q96MC2 740 aa13.32□□□□□ -0.28
PDE9A-207ENST00000398224 RBM27Q9P2N5 1060 aaKnown RBP13.32□□□□□ -0.28
PDE9A-207ENST00000398224 PCDHB15Q9Y5E8 787 aa13.32□□□□□ -0.28
PDE9A-207ENST00000398224 LRRFIP2Q9Y608 721 aaKnown RBP13.32□□□□□ -0.28
PDE9A-207ENST00000398224 COL17A1Q9UMD9 1497 aaPredicted RBP13.32□□□□□ -0.28
PDE9A-207ENST00000398224 RPS6KA5O75582 802 aa13.31□□□□□ -0.28
PDE9A-207ENST00000398224 ERCC3P19447 782 aa13.31□□□□□ -0.28
PDE9A-207ENST00000398224 CASC1Q6TDU7 716 aa13.31□□□□□ -0.28
PDE9A-207ENST00000398224 EXOC4Q96A65 974 aa13.31□□□□□ -0.28
PDE9A-207ENST00000398224 PSMD1Q99460 953 aa13.31□□□□□ -0.28
PDE9A-207ENST00000398224 COG6Q9Y2V7 657 aa13.31□□□□□ -0.28
PDE9A-207ENST00000398224 ATP10AO60312 1499 aa13.31□□□□□ -0.28
PDE9A-207ENST00000398224 ELP1O95163 1332 aa13.31□□□□□ -0.28
PDE9A-207ENST00000398224 CCDC171Q6TFL3 1326 aa13.31□□□□□ -0.28
PDE9A-207ENST00000398224 BCAR3O75815 825 aa13.31□□□□□ -0.28
PDE9A-207ENST00000398224 BMP2KLQ5H9B9 411 aa13.31□□□□□ -0.28
PDE9A-207ENST00000398224 FBXO38Q6PIJ6 1188 aa13.31□□□□□ -0.28
PDE9A-207ENST00000398224 STAG1Q8WVM7 1258 aa13.31□□□□□ -0.28
PDE9A-207ENST00000398224 UBXN6Q9BZV1 441 aa13.31□□□□□ -0.28
PDE9A-207ENST00000398224 TMX1Q9H3N1 280 aa13.31□□□□□ -0.28
PDE9A-207ENST00000398224 GPRASP1Q5JY77 1395 aa13.31□□□□□ -0.28
PDE9A-207ENST00000398224 TRIM66O15016 1216 aa13.3□□□□□ -0.28
PDE9A-207ENST00000398224 C21orf2O43822 256 aa13.3□□□□□ -0.28
PDE9A-207ENST00000398224 TNNT1P13805 278 aa13.3□□□□□ -0.28
PDE9A-207ENST00000398224 GYS2P54840 703 aa13.3□□□□□ -0.28
PDE9A-207ENST00000398224 KCNF1Q9H3M0 494 aa13.3□□□□□ -0.28
PDE9A-207ENST00000398224 TOMM22Q9NS69 142 aa13.3□□□□□ -0.28
PDE9A-207ENST00000398224 PYCARDQ9ULZ3 195 aa13.3□□□□□ -0.28
PDE9A-207ENST00000398224 ADAMTS8Q9UP79 889 aa13.3□□□□□ -0.28
PDE9A-207ENST00000398224 ANKRD50Q9ULJ7 1429 aa13.29□□□□□ -0.28
PDE9A-207ENST00000398224 NEFHP12036 1026 aa13.29□□□□□ -0.28
PDE9A-207ENST00000398224 IRX1P78414 480 aaPredicted RBP13.29□□□□□ -0.28
PDE9A-207ENST00000398224 C17orf53Q8N3J3 647 aaPredicted RBP13.29□□□□□ -0.28
PDE9A-207ENST00000398224 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.29□□□□□ -0.28
PDE9A-207ENST00000398224 FHOD1Q9Y613 1164 aa13.29□□□□□ -0.28
PDE9A-207ENST00000398224 URB2Q14146 1524 aaKnown RBP13.29□□□□□ -0.28
PDE9A-207ENST00000398224 SGSM2O43147 1006 aa13.28□□□□□ -0.28
PDE9A-207ENST00000398224 PACS2Q86VP3 889 aa13.28□□□□□ -0.28
PDE9A-207ENST00000398224 FAM107BQ9H098 131 aa13.28□□□□□ -0.28
PDE9A-207ENST00000398224 ARGLU1Q9NWB6 273 aaPredicted RBP13.28□□□□□ -0.28
PDE9A-207ENST00000398224 CLTCL1P53675 1640 aa13.28□□□□□ -0.28
PDE9A-207ENST00000398224 ANKRD33BA6NCL7 494 aa13.28□□□□□ -0.28
PDE9A-207ENST00000398224 CTAGE5O15320 804 aa13.28□□□□□ -0.28
PDE9A-207ENST00000398224 TUBB4AP04350 444 aa13.28□□□□□ -0.28
PDE9A-207ENST00000398224 ZRSR1Q15695 479 aaKnown RBP13.28□□□□□ -0.28
PDE9A-207ENST00000398224 A1CFQ9NQ94 594 aaKnown RBP13.28□□□□□ -0.28
PDE9A-207ENST00000398224 MRVI1Q9Y6F6 885 aa13.28□□□□□ -0.28
PDE9A-207ENST00000398224 CEP170Q5SW79 1584 aa13.27□□□□□ -0.28
PDE9A-207ENST00000398224 CCDC141Q6ZP82 1450 aa13.27□□□□□ -0.28
PDE9A-207ENST00000398224 OS9Q13438 667 aaPredicted RBP13.27□□□□□ -0.29
PDE9A-207ENST00000398224 CCDC183Q5T5S1 534 aa13.27□□□□□ -0.29
PDE9A-207ENST00000398224 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.27□□□□□ -0.29
PDE9A-207ENST00000398224 EFCAB13Q8IY85 973 aa13.27□□□□□ -0.29
PDE9A-207ENST00000398224 SLU7O95391 586 aaKnown RBP13.26□□□□□ -0.29
PDE9A-207ENST00000398224 CD2BP2O95400 341 aaKnown RBP13.26□□□□□ -0.29
PDE9A-207ENST00000398224 PNMA6AP0CW24 399 aaPredicted RBP13.26□□□□□ -0.29
PDE9A-207ENST00000398224 ACTN2P35609 894 aa13.26□□□□□ -0.29
PDE9A-207ENST00000398224 PANK1Q8TE04 598 aa13.26□□□□□ -0.29
PDE9A-207ENST00000398224 CARD11Q9BXL7 1154 aa13.26□□□□□ -0.29
PDE9A-207ENST00000398224 KCND1Q9NSA2 647 aa13.26□□□□□ -0.29
PDE9A-207ENST00000398224 MKRN1Q9UHC7 482 aaKnown RBP13.26□□□□□ -0.29
PDE9A-207ENST00000398224 MAFGO15525 162 aa13.25□□□□□ -0.29
PDE9A-207ENST00000398224 NEMFO60524 1076 aa13.25□□□□□ -0.29
PDE9A-207ENST00000398224 MAP9Q49MG5 647 aa13.25□□□□□ -0.29
PDE9A-207ENST00000398224 NEK11Q8NG66 645 aa13.25□□□□□ -0.29
PDE9A-207ENST00000398224 PUS7Q96PZ0 661 aaKnown RBP13.25□□□□□ -0.29
PDE9A-207ENST00000398224 ITSN2Q9NZM3 1697 aa13.25□□□□□ -0.29
PDE9A-207ENST00000398224 AK9Q5TCS8 1911 aa13.25□□□□□ -0.29
PDE9A-207ENST00000398224 H0YHG0 523 aa13.24□□□□□ -0.29
PDE9A-207ENST00000398224 ZRANB2O95218 330 aaKnown RBP eCLIP13.24□□□□□ -0.29
PDE9A-207ENST00000398224 PLA2G4AP47712 749 aa13.24□□□□□ -0.29
PDE9A-207ENST00000398224 CORO7P57737 925 aa13.24□□□□□ -0.29
PDE9A-207ENST00000398224 SARNPP82979 210 aaKnown RBP13.24□□□□□ -0.29
PDE9A-207ENST00000398224 CEP135Q66GS9 1140 aa13.24□□□□□ -0.29
PDE9A-207ENST00000398224 TMEM87AQ8NBN3 555 aa13.24□□□□□ -0.29
PDE9A-207ENST00000398224 PAIP2Q9BPZ3 127 aaKnown RBP13.24□□□□□ -0.29
PDE9A-207ENST00000398224 LCMT1Q9UIC8 334 aa13.24□□□□□ -0.29
PDE9A-207ENST00000398224 TOPBP1Q92547 1522 aa13.24□□□□□ -0.29
PDE9A-207ENST00000398224 PZPP20742 1482 aa13.24□□□□□ -0.29
PDE9A-207ENST00000398224 TPM1P09493 284 aa13.24□□□□□ -0.29
PDE9A-207ENST00000398224 LEKR1Q6ZMV7 388 aa13.24□□□□□ -0.29
PDE9A-207ENST00000398224 NUTM1Q86Y26 1132 aa13.24□□□□□ -0.29
PDE9A-207ENST00000398224 STK26Q9P289 416 aa13.24□□□□□ -0.29
PDE9A-207ENST00000398224 MVPQ14764 893 aaKnown RBP13.23□□□□□ -0.29
PDE9A-207ENST00000398224 FILIP1Q7Z7B0 1213 aa13.23□□□□□ -0.29
PDE9A-207ENST00000398224 UTP14AQ9BVJ6 771 aaKnown RBP13.23□□□□□ -0.29
PDE9A-207ENST00000398224 SMC2O95347 1197 aa13.22□□□□□ -0.29
PDE9A-207ENST00000398224 SART3Q15020 963 aaKnown RBP13.22□□□□□ -0.29
PDE9A-207ENST00000398224 DNAJC21Q5F1R6 531 aaKnown RBP13.22□□□□□ -0.29
PDE9A-207ENST00000398224 JAKMIP3Q5VZ66 844 aa13.22□□□□□ -0.29
PDE9A-207ENST00000398224 FMNL3Q8IVF7 1028 aa13.22□□□□□ -0.29
PDE9A-207ENST00000398224 ZSCAN16Q9H4T2 348 aaPredicted RBP13.22□□□□□ -0.29
PDE9A-207ENST00000398224 ST7Q9NRC1 585 aa13.22□□□□□ -0.29
PDE9A-207ENST00000398224 ZNF215Q9UL58 517 aaPredicted RBP13.22□□□□□ -0.29
PDE9A-207ENST00000398224 WDR62O43379 1518 aa13.22□□□□□ -0.29
PDE9A-207ENST00000398224 DNMT1P26358 1616 aaKnown RBP13.22□□□□□ -0.29
PDE9A-207ENST00000398224 TRPM1Q7Z4N2 1603 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms