RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 MARCH10Q8NA82 808 aaPredicted RBP34.05■■■■□ 3.04
TMEM55B-202ENST00000398020 ANP32CO43423 234 aa34.04■■■■□ 3.04
TMEM55B-202ENST00000398020 ZCRB1Q8TBF4 217 aaKnown RBP34.03■■■■□ 3.04
TMEM55B-202ENST00000398020 DDX54Q8TDD1 881 aaKnown RBP34.03■■■■□ 3.04
TMEM55B-202ENST00000398020 KDRP35968 1356 aa34.01■■■■□ 3.03
TMEM55B-202ENST00000398020 SHANK3Q9BYB0 1731 aa34■■■■□ 3.03
TMEM55B-202ENST00000398020 NUDCQ9Y266 331 aa34■■■■□ 3.03
TMEM55B-202ENST00000398020 PKD1L3Q7Z443 1732 aa33.97■■■■□ 3.03
TMEM55B-202ENST00000398020 U2AF1L5P0DN76 240 aaPredicted RBP33.96■■■■□ 3.03
TMEM55B-202ENST00000398020 U2AF1Q01081 240 aaKnown RBP eCLIP33.96■■■■□ 3.03
TMEM55B-202ENST00000398020 FAM196AQ6ZSG2 479 aa33.96■■■■□ 3.03
TMEM55B-202ENST00000398020 SOCS7O14512 581 aa33.94■■■■□ 3.02
TMEM55B-202ENST00000398020 SPG7Q9UQ90 795 aa33.93■■■■□ 3.02
TMEM55B-202ENST00000398020 PCDH11XQ9BZA7 1347 aa33.92■■■■□ 3.02
TMEM55B-202ENST00000398020 PCDH11YQ9BZA8 1340 aa33.92■■■■□ 3.02
TMEM55B-202ENST00000398020 UPF1Q92900 1129 aaKnown RBP eCLIP33.92■■■■□ 3.029e-8■■■■□ 20.8
TMEM55B-202ENST00000398020 CYP27B1O15528 508 aa33.9■■■■□ 3.02
TMEM55B-202ENST00000398020 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP33.9■■■■□ 3.02
TMEM55B-202ENST00000398020 CCDC184Q52MB2 194 aa33.89■■■■□ 3.02
TMEM55B-202ENST00000398020 PLEKHO1Q53GL0 409 aaPredicted RBP33.88■■■■□ 3.01
TMEM55B-202ENST00000398020 TRIM37O94972 964 aa33.87■■■■□ 3.01
TMEM55B-202ENST00000398020 RSPH6AQ9H0K4 717 aa33.87■■■■□ 3.01
TMEM55B-202ENST00000398020 PRKAR2BP31323 418 aa33.87■■■■□ 3.01
TMEM55B-202ENST00000398020 ACSBG1Q96GR2 724 aa33.86■■■■□ 3.01
TMEM55B-202ENST00000398020 PLEKHG2Q9H7P9 1386 aa33.85■■■■□ 3.01
TMEM55B-202ENST00000398020 AMOTQ4VCS5 1084 aa33.85■■■■□ 3.01
TMEM55B-202ENST00000398020 SBF2Q86WG5 1849 aa33.85■■■■□ 3.01
TMEM55B-202ENST00000398020 ZNF530Q6P9A1 599 aaPredicted RBP33.84■■■■□ 3.01
TMEM55B-202ENST00000398020 BCL9O00512 1426 aa33.83■■■■□ 3.01
TMEM55B-202ENST00000398020 PTF1AQ7RTS3 328 aa33.83■■■■□ 3.01
TMEM55B-202ENST00000398020 PHKG2P15735 406 aa33.82■■■■□ 3
TMEM55B-202ENST00000398020 DIEXFQ68CQ4 756 aaKnown RBP33.82■■■■□ 3
TMEM55B-202ENST00000398020 KAT6BQ8WYB5 2073 aa33.82■■■■□ 3
TMEM55B-202ENST00000398020 FCHSD2O94868 740 aa33.81■■■■□ 3
TMEM55B-202ENST00000398020 IFNL2Q8IZJ0 200 aa33.81■■■■□ 3
TMEM55B-202ENST00000398020 KCNQ2O43526 872 aa33.8■■■■□ 3
TMEM55B-202ENST00000398020 PHACTR3Q96KR7 559 aa33.8■■■■□ 3
TMEM55B-202ENST00000398020 MTHFSDQ2M296 383 aaKnown RBP33.8■■■■□ 3
TMEM55B-202ENST00000398020 DOT1LQ8TEK3 1739 aa33.8■■■■□ 3
TMEM55B-202ENST00000398020 WDR43Q15061 677 aaKnown RBP eCLIP33.79■■■■□ 3
TMEM55B-202ENST00000398020 TNS1Q9HBL0 1735 aaKnown RBP33.78■■■■□ 3
TMEM55B-202ENST00000398020 SF3B2Q13435 895 aaKnown RBP33.77■■■■□ 3
TMEM55B-202ENST00000398020 C1orf141Q5JVX7 400 aa33.77■■■■□ 3
TMEM55B-202ENST00000398020 MRS2Q9HD23 443 aa33.77■■■■□ 3
TMEM55B-202ENST00000398020 CCDC125Q86Z20 511 aa33.76■■■□□ 2.99
TMEM55B-202ENST00000398020 SYTL4Q96C24 671 aaPredicted RBP33.76■■■□□ 2.99
TMEM55B-202ENST00000398020 NHSQ6T4R5 1651 aa33.75■■■□□ 2.99
TMEM55B-202ENST00000398020 NKX1-1Q15270 411 aaPredicted RBP33.74■■■□□ 2.99
TMEM55B-202ENST00000398020 TOGARAM1Q9Y4F4 1720 aa33.74■■■□□ 2.99
TMEM55B-202ENST00000398020 PRIM1P49642 420 aaKnown RBP33.74■■■□□ 2.99
TMEM55B-202ENST00000398020 BCL11BQ9C0K0 894 aaPredicted RBP33.74■■■□□ 2.99
TMEM55B-202ENST00000398020 ADAMTS8Q9UP79 889 aa33.73■■■□□ 2.99
TMEM55B-202ENST00000398020 APBA3O96018 575 aa33.72■■■□□ 2.99
TMEM55B-202ENST00000398020 DEFB132Q7Z7B7 95 aa33.72■■■□□ 2.99
TMEM55B-202ENST00000398020 PLEKHF1Q96S99 279 aa33.71■■■□□ 2.99
TMEM55B-202ENST00000398020 AKAP4Q5JQC9 854 aa33.71■■■□□ 2.99
TMEM55B-202ENST00000398020 MPRIPQ6WCQ1 1025 aa33.71■■■□□ 2.99
TMEM55B-202ENST00000398020 GAS2L2Q8NHY3 880 aa33.69■■■□□ 2.98
TMEM55B-202ENST00000398020 KDM6AO15550 1401 aaPredicted RBP33.69■■■□□ 2.98
TMEM55B-202ENST00000398020 CCDC146Q8IYE0 955 aa33.68■■■□□ 2.98
TMEM55B-202ENST00000398020 HSP90AB1P08238 724 aaKnown RBP33.68■■■□□ 2.98
TMEM55B-202ENST00000398020 DCAF5Q96JK2 942 aa33.68■■■□□ 2.98
TMEM55B-202ENST00000398020 NEFMP07197 916 aa33.67■■■□□ 2.98
TMEM55B-202ENST00000398020 BTAF1O14981 1849 aa33.66■■■□□ 2.98
TMEM55B-202ENST00000398020 PNNQ9H307 717 aaKnown RBP33.66■■■□□ 2.98
TMEM55B-202ENST00000398020 ITGB4P16144 1822 aa33.66■■■□□ 2.98
TMEM55B-202ENST00000398020 EN1Q05925 392 aaPredicted RBP33.65■■■□□ 2.98
TMEM55B-202ENST00000398020 MAPK8IP3Q9UPT6 1336 aa33.65■■■□□ 2.98
TMEM55B-202ENST00000398020 BAG6P46379 1132 aa33.64■■■□□ 2.98
TMEM55B-202ENST00000398020 PNISRQ8TF01 805 aaKnown RBP33.64■■■□□ 2.98
TMEM55B-202ENST00000398020 LGR6Q9HBX8 967 aa33.64■■■□□ 2.98
TMEM55B-202ENST00000398020 MAP3K5Q99683 1374 aa33.63■■■□□ 2.97
TMEM55B-202ENST00000398020 GNAT3A8MTJ3 354 aa33.61■■■□□ 2.97
TMEM55B-202ENST00000398020 SCN11AQ9UI33 1791 aa33.61■■■□□ 2.97
TMEM55B-202ENST00000398020 PIGBQ92521 554 aa33.6■■■□□ 2.97
TMEM55B-202ENST00000398020 VIRMAQ69YN4 1812 aaKnown RBP33.6■■■□□ 2.97
TMEM55B-202ENST00000398020 MIER1Q8N108 512 aa33.59■■■□□ 2.97
TMEM55B-202ENST00000398020 TMOD3Q9NYL9 352 aa33.59■■■□□ 2.97
TMEM55B-202ENST00000398020 RNMTO43148 476 aaKnown RBP33.58■■■□□ 2.97
TMEM55B-202ENST00000398020 EZH2Q15910 746 aaKnown RBP33.58■■■□□ 2.97
TMEM55B-202ENST00000398020 ERVV-2B6SEH9 535 aa33.58■■■□□ 2.97
TMEM55B-202ENST00000398020 RUNDC1Q96C34 613 aa33.58■■■□□ 2.97
TMEM55B-202ENST00000398020 CABP4P57796 275 aa33.57■■■□□ 2.96
TMEM55B-202ENST00000398020 NFE2L2Q16236 605 aa33.56■■■□□ 2.96
TMEM55B-202ENST00000398020 CAMKK2Q96RR4 588 aa33.56■■■□□ 2.96
TMEM55B-202ENST00000398020 DLG5Q8TDM6 1919 aa33.56■■■□□ 2.96
TMEM55B-202ENST00000398020 IL17REQ8NFR9 667 aa33.55■■■□□ 2.96
TMEM55B-202ENST00000398020 ADAMTS7Q9UKP4 1686 aa33.55■■■□□ 2.96
TMEM55B-202ENST00000398020 PLSCR1O15162 318 aa33.55■■■□□ 2.96
TMEM55B-202ENST00000398020 NFATC2IPQ8NCF5 419 aa33.55■■■□□ 2.96
TMEM55B-202ENST00000398020 FAM9BQ8IZU0 186 aa33.54■■■□□ 2.96
TMEM55B-202ENST00000398020 RRP7AQ9Y3A4 280 aaKnown RBP33.54■■■□□ 2.96
TMEM55B-202ENST00000398020 DCTN1Q14203 1278 aa33.53■■■□□ 2.96
TMEM55B-202ENST00000398020 MCM10Q7L590 875 aa33.53■■■□□ 2.96
TMEM55B-202ENST00000398020 RTF1Q92541 710 aaKnown RBP33.52■■■□□ 2.96
TMEM55B-202ENST00000398020 NEUROD2Q15784 382 aa33.52■■■□□ 2.96
TMEM55B-202ENST00000398020 SLC52A2Q9HAB3 445 aa33.51■■■□□ 2.95
TMEM55B-202ENST00000398020 TMPOP42166 694 aaKnown RBP33.5■■■□□ 2.95
TMEM55B-202ENST00000398020 ASAP1Q9ULH1 1129 aa33.5■■■□□ 2.95
TMEM55B-202ENST00000398020 RGPD3A6NKT7 1758 aaPredicted RBP33.5■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms