RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 H3BQV1 296 aa13.37□□□□□ -0.27
CSGALNACT1-202ENST00000397998 IFFO2Q5TF58 517 aa13.37□□□□□ -0.27
CSGALNACT1-202ENST00000397998 CCDC30Q5VVM6 783 aa13.37□□□□□ -0.27
CSGALNACT1-202ENST00000397998 CNTROBQ8N137 903 aa13.37□□□□□ -0.27
CSGALNACT1-202ENST00000397998 BECN2A8MW95 431 aa13.37□□□□□ -0.27
CSGALNACT1-202ENST00000397998 DDX54Q8TDD1 881 aaKnown RBP13.37□□□□□ -0.27
CSGALNACT1-202ENST00000397998 CWC27Q6UX04 472 aaKnown RBP13.36□□□□□ -0.27
CSGALNACT1-202ENST00000397998 LMBRD1Q9NUN5 540 aa13.36□□□□□ -0.27
CSGALNACT1-202ENST00000397998 LETM1O95202 739 aaPredicted RBP13.36□□□□□ -0.27
CSGALNACT1-202ENST00000397998 GSPT1P15170 499 aaKnown RBP13.36□□□□□ -0.27
CSGALNACT1-202ENST00000397998 FOSBP53539 338 aa13.36□□□□□ -0.27
CSGALNACT1-202ENST00000397998 FBXO31Q5XUX0 539 aaPredicted RBP13.36□□□□□ -0.27
CSGALNACT1-202ENST00000397998 ZNF771Q7L3S4 317 aaPredicted RBP13.36□□□□□ -0.27
CSGALNACT1-202ENST00000397998 NUDT16Q96DE0 195 aaKnown RBP13.36□□□□□ -0.27
CSGALNACT1-202ENST00000397998 TRIM5Q9C035 493 aa13.36□□□□□ -0.27
CSGALNACT1-202ENST00000397998 CDC42BPAQ5VT25 1732 aa13.35□□□□□ -0.27
CSGALNACT1-202ENST00000397998 ABCA8O94911 1581 aa13.35□□□□□ -0.27
CSGALNACT1-202ENST00000397998 PDE1AP54750 535 aa13.35□□□□□ -0.27
CSGALNACT1-202ENST00000397998 FAM184AQ8NB25 1140 aa13.35□□□□□ -0.27
CSGALNACT1-202ENST00000397998 FBXW7Q969H0 707 aa13.35□□□□□ -0.27
CSGALNACT1-202ENST00000397998 HCLS1P14317 486 aaPredicted RBP13.35□□□□□ -0.27
CSGALNACT1-202ENST00000397998 CCDC61Q9Y6R9 512 aa13.35□□□□□ -0.27
CSGALNACT1-202ENST00000397998 TEFQ10587 303 aa13.34□□□□□ -0.27
CSGALNACT1-202ENST00000397998 CEP85Q6P2H3 762 aa13.34□□□□□ -0.27
CSGALNACT1-202ENST00000397998 FERMT3Q86UX7 667 aa13.34□□□□□ -0.27
CSGALNACT1-202ENST00000397998 AEBP1Q8IUX7 1158 aa13.34□□□□□ -0.27
CSGALNACT1-202ENST00000397998 KIF3AQ9Y496 699 aa13.34□□□□□ -0.27
CSGALNACT1-202ENST00000397998 KDM5AP29375 1690 aaKnown RBP13.34□□□□□ -0.27
CSGALNACT1-202ENST00000397998 ZNF445P59923 1031 aa13.34□□□□□ -0.27
CSGALNACT1-202ENST00000397998 CBX1P83916 185 aa13.34□□□□□ -0.27
CSGALNACT1-202ENST00000397998 PLEKHF1Q96S99 279 aa13.34□□□□□ -0.27
CSGALNACT1-202ENST00000397998 MCM5P33992 734 aa13.34□□□□□ -0.27
CSGALNACT1-202ENST00000397998 CLASRPQ8N2M8 674 aaKnown RBP13.34□□□□□ -0.27
CSGALNACT1-202ENST00000397998 NOL7Q9UMY1 257 aaKnown RBP13.34□□□□□ -0.27
CSGALNACT1-202ENST00000397998 ADCY5O95622 1261 aa13.33□□□□□ -0.27
CSGALNACT1-202ENST00000397998 HDGFL1Q5TGJ6 251 aa13.33□□□□□ -0.27
CSGALNACT1-202ENST00000397998 TTC12Q9H892 705 aaPredicted RBP13.33□□□□□ -0.27
CSGALNACT1-202ENST00000397998 DYNC1I1O14576 645 aa13.33□□□□□ -0.28
CSGALNACT1-202ENST00000397998 SRGAP3O43295 1099 aa13.33□□□□□ -0.28
CSGALNACT1-202ENST00000397998 CCDC83Q8IWF9 413 aa13.33□□□□□ -0.28
CSGALNACT1-202ENST00000397998 CCDC192P0DO97 292 aa13.33□□□□□ -0.28
CSGALNACT1-202ENST00000397998 PUS7Q96PZ0 661 aaKnown RBP13.33□□□□□ -0.28
CSGALNACT1-202ENST00000397998 PPP1R9BQ96SB3 815 aa13.33□□□□□ -0.28
CSGALNACT1-202ENST00000397998 PHF23Q9BUL5 403 aaPredicted RBP13.33□□□□□ -0.28
CSGALNACT1-202ENST00000397998 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.33□□□□□ -0.28
CSGALNACT1-202ENST00000397998 HS1BP3Q53T59 392 aa13.32□□□□□ -0.28
CSGALNACT1-202ENST00000397998 CCDC183Q5T5S1 534 aa13.32□□□□□ -0.28
CSGALNACT1-202ENST00000397998 SRCIN1Q9C0H9 1055 aa13.32□□□□□ -0.28
CSGALNACT1-202ENST00000397998 TMEM63CQ9P1W3 806 aa13.32□□□□□ -0.28
CSGALNACT1-202ENST00000397998 LRRFIP2Q9Y608 721 aaKnown RBP13.32□□□□□ -0.28
CSGALNACT1-202ENST00000397998 ZNF518AQ6AHZ1 1483 aa13.32□□□□□ -0.28
CSGALNACT1-202ENST00000397998 JAKMIP1Q96N16 626 aaKnown RBP13.32□□□□□ -0.28
CSGALNACT1-202ENST00000397998 UGGT1Q9NYU2 1555 aa13.32□□□□□ -0.28
CSGALNACT1-202ENST00000397998 CASTP20810 708 aaKnown RBP13.32□□□□□ -0.28
CSGALNACT1-202ENST00000397998 CHMP4AQ9BY43 222 aa13.32□□□□□ -0.28
CSGALNACT1-202ENST00000397998 CAMK4Q16566 473 aa13.31□□□□□ -0.28
CSGALNACT1-202ENST00000397998 HSP90AB4PQ58FF6 505 aa13.31□□□□□ -0.28
CSGALNACT1-202ENST00000397998 LARP1BQ659C4 914 aaKnown RBP13.31□□□□□ -0.28
CSGALNACT1-202ENST00000397998 USP48Q86UV5 1035 aa13.31□□□□□ -0.28
CSGALNACT1-202ENST00000397998 ZHX1Q9UKY1 873 aaPredicted RBP13.31□□□□□ -0.28
CSGALNACT1-202ENST00000397998 HDAC5Q9UQL6 1122 aa13.31□□□□□ -0.28
CSGALNACT1-202ENST00000397998 NLRP6P59044 892 aa13.31□□□□□ -0.28
CSGALNACT1-202ENST00000397998 ESYT1Q9BSJ8 1104 aa13.31□□□□□ -0.28
CSGALNACT1-202ENST00000397998 SBNO2Q9Y2G9 1366 aa13.31□□□□□ -0.28
CSGALNACT1-202ENST00000397998 STK3Q13188 491 aa13.31□□□□□ -0.28
CSGALNACT1-202ENST00000397998 SF3A1Q15459 793 aaKnown RBP13.31□□□□□ -0.28
CSGALNACT1-202ENST00000397998 ZNF692Q9BU19 519 aaPredicted RBP13.31□□□□□ -0.28
CSGALNACT1-202ENST00000397998 CYP46A1Q9Y6A2 500 aa13.31□□□□□ -0.28
CSGALNACT1-202ENST00000397998 PPIP5K1Q6PFW1 1433 aa13.31□□□□□ -0.28
CSGALNACT1-202ENST00000397998 CROCC2H7BZ55 1655 aa13.31□□□□□ -0.28
CSGALNACT1-202ENST00000397998 NCBP3Q53F19 620 aaKnown RBP13.3□□□□□ -0.28
CSGALNACT1-202ENST00000397998 SPG7Q9UQ90 795 aa13.3□□□□□ -0.28
CSGALNACT1-202ENST00000397998 PTPRCP08575 1304 aa13.3□□□□□ -0.28
CSGALNACT1-202ENST00000397998 CEBPZQ03701 1054 aaKnown RBP13.3□□□□□ -0.28
CSGALNACT1-202ENST00000397998 TPD52L1Q16890 204 aaPredicted RBP13.3□□□□□ -0.28
CSGALNACT1-202ENST00000397998 RNF20Q5VTR2 975 aa13.3□□□□□ -0.28
CSGALNACT1-202ENST00000397998 GIMAP6Q6P9H5 292 aa13.3□□□□□ -0.28
CSGALNACT1-202ENST00000397998 ADCY10Q96PN6 1610 aa13.3□□□□□ -0.28
CSGALNACT1-202ENST00000397998 G3BP1Q13283 466 aaKnown RBP eCLIP13.3□□□□□ -0.28
CSGALNACT1-202ENST00000397998 CNPY2Q9Y2B0 182 aa13.3□□□□□ -0.28
CSGALNACT1-202ENST00000397998 FAM177BA6PVY3 158 aa13.3□□□□□ -0.28
CSGALNACT1-202ENST00000397998 SIRT2Q8IXJ6 389 aa13.3□□□□□ -0.28
CSGALNACT1-202ENST00000397998 DTNBO60941 627 aa13.29□□□□□ -0.28
CSGALNACT1-202ENST00000397998 TPM3P06753 285 aa13.29□□□□□ -0.28
CSGALNACT1-202ENST00000397998 KRT85P78386 507 aa13.29□□□□□ -0.28
CSGALNACT1-202ENST00000397998 PDRG1Q9NUG6 133 aa13.29□□□□□ -0.28
CSGALNACT1-202ENST00000397998 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.29□□□□□ -0.28
CSGALNACT1-202ENST00000397998 A0A0U1RQG5 324 aaPredicted RBP13.29□□□□□ -0.28
CSGALNACT1-202ENST00000397998 WASLO00401 505 aaPredicted RBP13.29□□□□□ -0.28
CSGALNACT1-202ENST00000397998 PDCL2Q8N4E4 241 aa13.29□□□□□ -0.28
CSGALNACT1-202ENST00000397998 TNMDQ9H2S6 317 aa13.29□□□□□ -0.28
CSGALNACT1-202ENST00000397998 AIMP1Q12904 312 aaKnown RBP13.29□□□□□ -0.28
CSGALNACT1-202ENST00000397998 FLIIQ13045 1269 aa13.29□□□□□ -0.28
CSGALNACT1-202ENST00000397998 NOLC1Q14978 699 aaKnown RBP eCLIP13.29□□□□□ -0.28
CSGALNACT1-202ENST00000397998 CFAP65Q6ZU64 1925 aaKnown RBP13.28□□□□□ -0.28
CSGALNACT1-202ENST00000397998 NPHP1O15259 732 aa13.28□□□□□ -0.28
CSGALNACT1-202ENST00000397998 FSD1Q9BTV5 496 aa13.28□□□□□ -0.28
CSGALNACT1-202ENST00000397998 TTC37Q6PGP7 1564 aa13.28□□□□□ -0.28
CSGALNACT1-202ENST00000397998 STX6O43752 255 aa13.28□□□□□ -0.28
CSGALNACT1-202ENST00000397998 HSP90AB2PQ58FF8 381 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms