RNA–Protein interactions for RNA: ENST00000397772.2

TPM3P2-201, Transcript of tropomyosin 3 pseudogene 2, humanhuman

BASIC

Gene TPM3P2, Length 723 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P2-201ENST00000397772 CHD4Q14839 1912 aa13.4□□□□□ -0.26
TPM3P2-201ENST00000397772 CCDC7Q96M83 1385 aa13.4□□□□□ -0.26
TPM3P2-201ENST00000397772 NHSQ6T4R5 1651 aa13.4□□□□□ -0.26
TPM3P2-201ENST00000397772 ST20-MTHFSA0A0A6YYL1 179 aa13.39□□□□□ -0.27
TPM3P2-201ENST00000397772 SPDYE2BA6NHP3 402 aa13.39□□□□□ -0.27
TPM3P2-201ENST00000397772 SLC24A1O60721 1099 aa13.39□□□□□ -0.27
TPM3P2-201ENST00000397772 SPDYE6P0CI01 402 aa13.39□□□□□ -0.27
TPM3P2-201ENST00000397772 SPDYE2Q495Y8 402 aa13.39□□□□□ -0.27
TPM3P2-201ENST00000397772 LRRC4BQ9NT99 713 aa13.39□□□□□ -0.27
TPM3P2-201ENST00000397772 MAP3K5Q99683 1374 aa13.39□□□□□ -0.27
TPM3P2-201ENST00000397772 CEP350Q5VT06 3117 aa13.39□□□□□ -0.27
TPM3P2-201ENST00000397772 ZNF692Q9BU19 519 aaPredicted RBP13.38□□□□□ -0.27
TPM3P2-201ENST00000397772 WASHC2AQ641Q2 1341 aa13.38□□□□□ -0.27
TPM3P2-201ENST00000397772 EVC2Q86UK5 1308 aa13.38□□□□□ -0.27
TPM3P2-201ENST00000397772 MKRN4PQ13434 485 aaPredicted RBP13.37□□□□□ -0.27
TPM3P2-201ENST00000397772 TTC21AQ8NDW8 1320 aa13.37□□□□□ -0.27
TPM3P2-201ENST00000397772 ABCC6O95255 1503 aa13.36□□□□□ -0.27
TPM3P2-201ENST00000397772 KIF7Q2M1P5 1343 aa13.36□□□□□ -0.27
TPM3P2-201ENST00000397772 BTAF1O14981 1849 aa13.35□□□□□ -0.27
TPM3P2-201ENST00000397772 DDX10Q13206 875 aaKnown RBP13.35□□□□□ -0.27
TPM3P2-201ENST00000397772 ERBB3P21860 1342 aa13.35□□□□□ -0.27
TPM3P2-201ENST00000397772 SBNO2Q9Y2G9 1366 aa13.34□□□□□ -0.27
TPM3P2-201ENST00000397772 GPR162Q16538 588 aa13.34□□□□□ -0.27
TPM3P2-201ENST00000397772 NLRP2Q9NX02 1062 aa13.34□□□□□ -0.27
TPM3P2-201ENST00000397772 USP31Q70CQ4 1352 aa13.33□□□□□ -0.27
TPM3P2-201ENST00000397772 KTN1Q86UP2 1357 aaKnown RBP13.33□□□□□ -0.27
TPM3P2-201ENST00000397772 IL2RBP14784 551 aa13.33□□□□□ -0.28
TPM3P2-201ENST00000397772 TMF1P82094 1093 aa13.33□□□□□ -0.28
TPM3P2-201ENST00000397772 CDCA8Q53HL2 280 aa13.32□□□□□ -0.28
TPM3P2-201ENST00000397772 NME9Q86XW9 330 aa13.32□□□□□ -0.28
TPM3P2-201ENST00000397772 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.32□□□□□ -0.28
TPM3P2-201ENST00000397772 NLGN2Q8NFZ4 835 aa13.32□□□□□ -0.28
TPM3P2-201ENST00000397772 COL24A1Q17RW2 1714 aa13.32□□□□□ -0.28
TPM3P2-201ENST00000397772 PNPLA7Q6ZV29 1317 aa13.32□□□□□ -0.28
TPM3P2-201ENST00000397772 KCNQ4P56696 695 aa13.31□□□□□ -0.28
TPM3P2-201ENST00000397772 ANKRD24Q8TF21 1146 aa13.31□□□□□ -0.28
TPM3P2-201ENST00000397772 TESK2Q96S53 571 aa13.31□□□□□ -0.28
TPM3P2-201ENST00000397772 CD163L1Q9NR16 1453 aa13.3□□□□□ -0.28
TPM3P2-201ENST00000397772 IFFO2Q5TF58 517 aa13.3□□□□□ -0.28
TPM3P2-201ENST00000397772 KLHL34Q8N239 644 aa13.3□□□□□ -0.28
TPM3P2-201ENST00000397772 SLC16A10Q8TF71 515 aa13.3□□□□□ -0.28
TPM3P2-201ENST00000397772 MON2Q7Z3U7 1717 aa13.3□□□□□ -0.28
TPM3P2-201ENST00000397772 SHANK3Q9BYB0 1731 aa13.3□□□□□ -0.28
TPM3P2-201ENST00000397772 KAT6BQ8WYB5 2073 aa13.29□□□□□ -0.28
TPM3P2-201ENST00000397772 USP54Q70EL1 1684 aa13.29□□□□□ -0.28
TPM3P2-201ENST00000397772 GIGYF1O75420 1035 aaPredicted RBP13.29□□□□□ -0.28
TPM3P2-201ENST00000397772 SLC27A3Q5K4L6 730 aa13.29□□□□□ -0.28
TPM3P2-201ENST00000397772 QSER1Q2KHR3 1735 aa13.28□□□□□ -0.28
TPM3P2-201ENST00000397772 TUBGCP6Q96RT7 1819 aa13.28□□□□□ -0.28
TPM3P2-201ENST00000397772 YBX3P16989 372 aaKnown RBP eCLIP13.28□□□□□ -0.28
TPM3P2-201ENST00000397772 PELP1Q8IZL8 1130 aaKnown RBP13.28□□□□□ -0.28
TPM3P2-201ENST00000397772 LTN1O94822 1766 aa13.27□□□□□ -0.28
TPM3P2-201ENST00000397772 HAX1O00165 279 aa13.27□□□□□ -0.29
TPM3P2-201ENST00000397772 POLD1P28340 1107 aa13.27□□□□□ -0.29
TPM3P2-201ENST00000397772 DDX54Q8TDD1 881 aaKnown RBP13.27□□□□□ -0.29
TPM3P2-201ENST00000397772 POLR3GLQ9BT43 218 aa13.27□□□□□ -0.29
TPM3P2-201ENST00000397772 NSD2O96028 1365 aa13.27□□□□□ -0.29
TPM3P2-201ENST00000397772 PRIM1P49642 420 aaKnown RBP13.26□□□□□ -0.29
TPM3P2-201ENST00000397772 ANP32CO43423 234 aa13.25□□□□□ -0.29
TPM3P2-201ENST00000397772 MIER1Q8N108 512 aa13.25□□□□□ -0.29
TPM3P2-201ENST00000397772 SLC12A5Q9H2X9 1139 aa13.25□□□□□ -0.29
TPM3P2-201ENST00000397772 TFCP2L1Q9NZI6 479 aa13.25□□□□□ -0.29
TPM3P2-201ENST00000397772 IP6K1Q92551 441 aa13.24□□□□□ -0.29
TPM3P2-201ENST00000397772 SSUH2Q9Y2M2 353 aa13.24□□□□□ -0.29
TPM3P2-201ENST00000397772 ANKRD36BQ8N2N9 1353 aa13.23□□□□□ -0.29
TPM3P2-201ENST00000397772 COL23A1Q86Y22 540 aaPredicted RBP13.23□□□□□ -0.29
TPM3P2-201ENST00000397772 SYTL4Q96C24 671 aaPredicted RBP13.23□□□□□ -0.29
TPM3P2-201ENST00000397772 LTV1Q96GA3 475 aaPredicted RBP13.23□□□□□ -0.29
TPM3P2-201ENST00000397772 LY75O60449 1722 aa13.22□□□□□ -0.29
TPM3P2-201ENST00000397772 FBLN1P23142 703 aa13.22□□□□□ -0.29
TPM3P2-201ENST00000397772 TMC1Q8TDI8 760 aa13.22□□□□□ -0.29
TPM3P2-201ENST00000397772 PUS7Q96PZ0 661 aaKnown RBP13.22□□□□□ -0.29
TPM3P2-201ENST00000397772 EDC4Q6P2E9 1401 aaKnown RBP13.22□□□□□ -0.29
TPM3P2-201ENST00000397772 GRIN3BO60391 1043 aa13.21□□□□□ -0.29
TPM3P2-201ENST00000397772 DOT1LQ8TEK3 1739 aa13.21□□□□□ -0.3
TPM3P2-201ENST00000397772 ATP10DQ9P241 1426 aa13.21□□□□□ -0.3
TPM3P2-201ENST00000397772 A0A1W2PP64 1363 aa13.2□□□□□ -0.3
TPM3P2-201ENST00000397772 MSL1Q68DK7 614 aa13.2□□□□□ -0.3
TPM3P2-201ENST00000397772 HDGFL2Q7Z4V5 671 aaPredicted RBP13.2□□□□□ -0.3
TPM3P2-201ENST00000397772 CCNL1Q9UK58 526 aaPredicted RBP13.2□□□□□ -0.3
TPM3P2-201ENST00000397772 FAM208AQ9UK61 1670 aaKnown RBP13.2□□□□□ -0.3
TPM3P2-201ENST00000397772 MEGF6O75095 1541 aa13.19□□□□□ -0.3
TPM3P2-201ENST00000397772 ZCRB1Q8TBF4 217 aaKnown RBP13.19□□□□□ -0.3
TPM3P2-201ENST00000397772 MAP3K19Q56UN5 1328 aa13.18□□□□□ -0.3
TPM3P2-201ENST00000397772 HOXC9P31274 260 aa13.18□□□□□ -0.3
TPM3P2-201ENST00000397772 EVX2Q03828 476 aa13.18□□□□□ -0.3
TPM3P2-201ENST00000397772 SPDYE1Q8NFV5 336 aaPredicted RBP13.18□□□□□ -0.3
TPM3P2-201ENST00000397772 RGPD2P0DJD1 1756 aa13.17□□□□□ -0.3
TPM3P2-201ENST00000397772 CCER2I3L3R5 266 aa13.17□□□□□ -0.3
TPM3P2-201ENST00000397772 ADCY9O60503 1353 aa13.17□□□□□ -0.3
TPM3P2-201ENST00000397772 NBPF6Q5VWK0 638 aa13.16□□□□□ -0.3
TPM3P2-201ENST00000397772 AMIGO3Q86WK7 504 aa13.16□□□□□ -0.3
TPM3P2-201ENST00000397772 NBPF4Q96M43 638 aa13.16□□□□□ -0.3
TPM3P2-201ENST00000397772 TERF2IPQ9NYB0 399 aa13.16□□□□□ -0.3
TPM3P2-201ENST00000397772 CD2APQ9Y5K6 639 aa13.15□□□□□ -0.3
TPM3P2-201ENST00000397772 SMIM5Q71RC9 77 aa13.14□□□□□ -0.31
TPM3P2-201ENST00000397772 USHBP1Q8N6Y0 703 aa13.14□□□□□ -0.31
TPM3P2-201ENST00000397772 GPBP1L1Q9HC44 474 aaPredicted RBP13.14□□□□□ -0.31
TPM3P2-201ENST00000397772 CLEC11AQ9Y240 323 aa13.14□□□□□ -0.31
TPM3P2-201ENST00000397772 PRKAR2AP13861 404 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms