RNA–Protein interactions for RNA: ENST00000397386.7

LMCD1-202, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-202ENST00000397386 NUTM2AQ8IVF1 878 aaPredicted RBP16.56■□□□□ 0.24
LMCD1-202ENST00000397386 NWD2Q9ULI1 1742 aa16.56■□□□□ 0.24
LMCD1-202ENST00000397386 SLIT2O94813 1529 aa16.56■□□□□ 0.24
LMCD1-202ENST00000397386 TATP17735 454 aaPredicted RBP16.55■□□□□ 0.24
LMCD1-202ENST00000397386 DUSP27Q5VZP5 1158 aa16.55■□□□□ 0.24
LMCD1-202ENST00000397386 LARP1Q6PKG0 1096 aaKnown RBP16.55■□□□□ 0.24
LMCD1-202ENST00000397386 STRN4Q9NRL3 753 aa16.55■□□□□ 0.24
LMCD1-202ENST00000397386 GNAT3A8MTJ3 354 aa16.55■□□□□ 0.24
LMCD1-202ENST00000397386 MYH16Q9H6N6 1097 aa16.55■□□□□ 0.24
LMCD1-202ENST00000397386 RTF1Q92541 710 aaKnown RBP16.53■□□□□ 0.24
LMCD1-202ENST00000397386 SPINK5Q9NQ38 1064 aaPredicted RBP16.53■□□□□ 0.24
LMCD1-202ENST00000397386 SPG7Q9UQ90 795 aa16.53■□□□□ 0.24
LMCD1-202ENST00000397386 MAP3K5Q99683 1374 aa16.53■□□□□ 0.24
LMCD1-202ENST00000397386 OVOS2A0A0G2JMS6 1433 aa16.52■□□□□ 0.24
LMCD1-202ENST00000397386 MEGF6O75095 1541 aa16.52■□□□□ 0.24
LMCD1-202ENST00000397386 NRAPQ86VF7 1730 aa16.52■□□□□ 0.24
LMCD1-202ENST00000397386 AKAP4Q5JQC9 854 aa16.52■□□□□ 0.24
LMCD1-202ENST00000397386 IL2RBP14784 551 aa16.51■□□□□ 0.23
LMCD1-202ENST00000397386 FNBP4Q8N3X1 1017 aaPredicted RBP16.51■□□□□ 0.23
LMCD1-202ENST00000397386 IFT57Q9NWB7 429 aa16.51■□□□□ 0.23
LMCD1-202ENST00000397386 PARP4Q9UKK3 1724 aaKnown RBP16.51■□□□□ 0.23
LMCD1-202ENST00000397386 LRP6O75581 1613 aa16.51■□□□□ 0.23
LMCD1-202ENST00000397386 PKD1L3Q7Z443 1732 aa16.51■□□□□ 0.23
LMCD1-202ENST00000397386 GNAI1P63096 354 aa16.5■□□□□ 0.23
LMCD1-202ENST00000397386 ZNF530Q6P9A1 599 aaPredicted RBP16.5■□□□□ 0.23
LMCD1-202ENST00000397386 THRAP3Q9Y2W1 955 aaKnown RBP16.5■□□□□ 0.23
LMCD1-202ENST00000397386 ZNF853P0CG23 659 aa16.5■□□□□ 0.23
LMCD1-202ENST00000397386 C1orf141Q5JVX7 400 aa16.5■□□□□ 0.23
LMCD1-202ENST00000397386 UNC5CLQ8IV45 518 aa16.5■□□□□ 0.23
LMCD1-202ENST00000397386 NGLY1Q96IV0 654 aa16.5■□□□□ 0.23
LMCD1-202ENST00000397386 CFAP44Q96MT7 982 aa16.5■□□□□ 0.23
LMCD1-202ENST00000397386 CEMIPQ8WUJ3 1361 aa16.49■□□□□ 0.23
LMCD1-202ENST00000397386 CDCA7Q9BWT1 371 aaPredicted RBP16.49■□□□□ 0.23
LMCD1-202ENST00000397386 MCM10Q7L590 875 aa16.48■□□□□ 0.23
LMCD1-202ENST00000397386 C8orf37Q96NL8 207 aa16.48■□□□□ 0.23
LMCD1-202ENST00000397386 BCL9LQ86UU0 1499 aa16.48■□□□□ 0.23
LMCD1-202ENST00000397386 SPATA31A1Q5TZJ5 1347 aa16.48■□□□□ 0.23
LMCD1-202ENST00000397386 DISP2A7MBM2 1401 aa16.47■□□□□ 0.23
LMCD1-202ENST00000397386 LRRC37A3O60309 1634 aa16.47■□□□□ 0.23
LMCD1-202ENST00000397386 CT47B1P0C2W7 299 aaPredicted RBP16.47■□□□□ 0.23
LMCD1-202ENST00000397386 DCTN1Q14203 1278 aa16.47■□□□□ 0.23
LMCD1-202ENST00000397386 ILDR1Q86SU0 546 aaPredicted RBP16.47■□□□□ 0.23
LMCD1-202ENST00000397386 IFNL2Q8IZJ0 200 aa16.47■□□□□ 0.23
LMCD1-202ENST00000397386 THUMPD2Q9BTF0 503 aaKnown RBP16.47■□□□□ 0.23
LMCD1-202ENST00000397386 BABAM1Q9NWV8 329 aa16.47■□□□□ 0.23
LMCD1-202ENST00000397386 SPATA31A5Q5VU36 1347 aa16.47■□□□□ 0.23
LMCD1-202ENST00000397386 SPATA31A7Q8IWB4 1347 aa16.47■□□□□ 0.23
LMCD1-202ENST00000397386 FANCIQ9NVI1 1328 aa16.47■□□□□ 0.23
LMCD1-202ENST00000397386 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.46■□□□□ 0.23
LMCD1-202ENST00000397386 IL17REQ8NFR9 667 aa16.46■□□□□ 0.23
LMCD1-202ENST00000397386 ZCRB1Q8TBF4 217 aaKnown RBP16.46■□□□□ 0.23
LMCD1-202ENST00000397386 PCDH11XQ9BZA7 1347 aa16.46■□□□□ 0.23
LMCD1-202ENST00000397386 PCDH11YQ9BZA8 1340 aa16.46■□□□□ 0.23
LMCD1-202ENST00000397386 ADAMTS7Q9UKP4 1686 aa16.46■□□□□ 0.23
LMCD1-202ENST00000397386 CHL1O00533 1208 aa16.45■□□□□ 0.22
LMCD1-202ENST00000397386 HSP90AB1P08238 724 aaKnown RBP16.45■□□□□ 0.22
LMCD1-202ENST00000397386 PHKG2P15735 406 aa16.45■□□□□ 0.22
LMCD1-202ENST00000397386 VPS72Q15906 364 aa16.45■□□□□ 0.22
LMCD1-202ENST00000397386 BARGINQ6ZT62 677 aa16.45■□□□□ 0.22
LMCD1-202ENST00000397386 USP35Q9P2H5 1018 aa16.45■□□□□ 0.22
LMCD1-202ENST00000397386 RCAN3Q9UKA8 241 aa16.45■□□□□ 0.22
LMCD1-202ENST00000397386 CYP27B1O15528 508 aa16.44■□□□□ 0.22
LMCD1-202ENST00000397386 MEX3CQ5U5Q3 659 aaKnown RBP16.44■□□□□ 0.22
LMCD1-202ENST00000397386 DCAF5Q96JK2 942 aa16.44■□□□□ 0.22
LMCD1-202ENST00000397386 RNMTO43148 476 aaKnown RBP16.43■□□□□ 0.22
LMCD1-202ENST00000397386 TAF7Q15545 349 aaPredicted RBP16.43■□□□□ 0.22
LMCD1-202ENST00000397386 TSR2Q969E8 191 aaKnown RBP16.43■□□□□ 0.22
LMCD1-202ENST00000397386 MBIPQ9NS73 344 aa16.43■□□□□ 0.22
LMCD1-202ENST00000397386 USP21Q9UK80 565 aa16.43■□□□□ 0.22
LMCD1-202ENST00000397386 WNK3Q9BYP7 1800 aa16.42■□□□□ 0.22
LMCD1-202ENST00000397386 NKX1-1Q15270 411 aaPredicted RBP16.42■□□□□ 0.22
LMCD1-202ENST00000397386 RNF123Q5XPI4 1314 aa16.41■□□□□ 0.22
LMCD1-202ENST00000397386 MPRIPQ6WCQ1 1025 aa16.41■□□□□ 0.22
LMCD1-202ENST00000397386 ZNF428Q96B54 188 aa16.41■□□□□ 0.22
LMCD1-202ENST00000397386 LGR6Q9HBX8 967 aa16.41■□□□□ 0.22
LMCD1-202ENST00000397386 LAS1LQ9Y4W2 734 aaKnown RBP16.41■□□□□ 0.22
LMCD1-202ENST00000397386 TEFQ10587 303 aa16.4■□□□□ 0.22
LMCD1-202ENST00000397386 SUPT16HQ9Y5B9 1047 aaKnown RBP16.4■□□□□ 0.22
LMCD1-202ENST00000397386 KDM6AO15550 1401 aaPredicted RBP16.4■□□□□ 0.22
LMCD1-202ENST00000397386 EXOSC9Q06265 439 aaKnown RBP16.4■□□□□ 0.22
LMCD1-202ENST00000397386 SCN11AQ9UI33 1791 aa16.4■□□□□ 0.22
LMCD1-202ENST00000397386 SHANK3Q9BYB0 1731 aa16.39■□□□□ 0.22
LMCD1-202ENST00000397386 TNS2Q63HR2 1409 aa16.39■□□□□ 0.21
LMCD1-202ENST00000397386 AFF2P51816 1311 aa16.39■□□□□ 0.21
LMCD1-202ENST00000397386 EXOC5O00471 708 aa16.39■□□□□ 0.21
LMCD1-202ENST00000397386 CCDC9Q9Y3X0 531 aaKnown RBP16.39■□□□□ 0.21
LMCD1-202ENST00000397386 MRC1P22897 1456 aa16.38■□□□□ 0.21
LMCD1-202ENST00000397386 TSPYL4Q9UJ04 414 aa16.38■□□□□ 0.21
LMCD1-202ENST00000397386 VIRMAQ69YN4 1812 aaKnown RBP16.38■□□□□ 0.21
LMCD1-202ENST00000397386 SOS1Q07889 1333 aaPredicted RBP16.37■□□□□ 0.21
LMCD1-202ENST00000397386 SLC52A2Q9HAB3 445 aa16.37■□□□□ 0.21
LMCD1-202ENST00000397386 ATRNO75882 1429 aa16.37■□□□□ 0.21
LMCD1-202ENST00000397386 ERVV-2B6SEH9 535 aa16.36■□□□□ 0.21
LMCD1-202ENST00000397386 TRPC5Q9UL62 973 aaPredicted RBP16.36■□□□□ 0.21
LMCD1-202ENST00000397386 SIPA1L3O60292 1781 aaPredicted RBP16.36■□□□□ 0.21
LMCD1-202ENST00000397386 DDB1Q16531 1140 aa16.35■□□□□ 0.21
LMCD1-202ENST00000397386 DDX54Q8TDD1 881 aaKnown RBP16.35■□□□□ 0.21
LMCD1-202ENST00000397386 RARSP54136 660 aaKnown RBP16.35■□□□□ 0.21
LMCD1-202ENST00000397386 GJD4Q96KN9 370 aaPredicted RBP16.35■□□□□ 0.21
LMCD1-202ENST00000397386 BTBD11A6QL63 1104 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms