RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 A0A1W2PP64 1363 aa17.94■□□□□ 0.46
SEC13-209ENST00000397117 NSD3Q9BZ95 1437 aa17.94■□□□□ 0.46
SEC13-209ENST00000397117 CC2D1BQ5T0F9 858 aaKnown RBP17.94■□□□□ 0.46
SEC13-209ENST00000397117 RALBP1Q15311 655 aa17.93■□□□□ 0.46
SEC13-209ENST00000397117 CCER2I3L3R5 266 aa17.92■□□□□ 0.46
SEC13-209ENST00000397117 AMER1Q5JTC6 1135 aaPredicted RBP17.92■□□□□ 0.46
SEC13-209ENST00000397117 ANKRD24Q8TF21 1146 aa17.92■□□□□ 0.46
SEC13-209ENST00000397117 ARXQ96QS3 562 aa17.91■□□□□ 0.46
SEC13-209ENST00000397117 LRRC4BQ9NT99 713 aa17.91■□□□□ 0.46
SEC13-209ENST00000397117 CGNL1Q0VF96 1302 aa17.91■□□□□ 0.46
SEC13-209ENST00000397117 MAP3K5Q99683 1374 aa17.9■□□□□ 0.46
SEC13-209ENST00000397117 NPC1L1Q9UHC9 1359 aa17.9■□□□□ 0.46
SEC13-209ENST00000397117 ZNF827Q17R98 1081 aa17.9■□□□□ 0.46
SEC13-209ENST00000397117 QSER1Q2KHR3 1735 aa17.89■□□□□ 0.45
SEC13-209ENST00000397117 EDC4Q6P2E9 1401 aaKnown RBP17.88■□□□□ 0.45
SEC13-209ENST00000397117 COL24A1Q17RW2 1714 aa17.88■□□□□ 0.45
SEC13-209ENST00000397117 AKT1S1Q96B36 256 aa17.87■□□□□ 0.45
SEC13-209ENST00000397117 IP6K1Q92551 441 aa17.87■□□□□ 0.45
SEC13-209ENST00000397117 UTRNP46939 3433 aa17.86■□□□□ 0.45
SEC13-209ENST00000397117 MYBBP1AQ9BQG0 1328 aaKnown RBP17.86■□□□□ 0.45
SEC13-209ENST00000397117 NSD2O96028 1365 aa17.85■□□□□ 0.45
SEC13-209ENST00000397117 SLC27A3Q5K4L6 730 aa17.85■□□□□ 0.45
SEC13-209ENST00000397117 SLC16A10Q8TF71 515 aa17.85■□□□□ 0.45
SEC13-209ENST00000397117 FAM208AQ9UK61 1670 aaKnown RBP17.84■□□□□ 0.45
SEC13-209ENST00000397117 TUBGCP6Q96RT7 1819 aa17.84■□□□□ 0.45
SEC13-209ENST00000397117 MORC1Q86VD1 984 aa17.83■□□□□ 0.45
SEC13-209ENST00000397117 DDX54Q8TDD1 881 aaKnown RBP17.83■□□□□ 0.45
SEC13-209ENST00000397117 PNPLA7Q6ZV29 1317 aa17.82■□□□□ 0.44
SEC13-209ENST00000397117 LY75O60449 1722 aa17.82■□□□□ 0.44
SEC13-209ENST00000397117 LTV1Q96GA3 475 aaPredicted RBP17.81■□□□□ 0.44
SEC13-209ENST00000397117 MRS2Q9HD23 443 aa17.81■□□□□ 0.44
SEC13-209ENST00000397117 RGPD2P0DJD1 1756 aa17.81■□□□□ 0.44
SEC13-209ENST00000397117 FYB1O15117 783 aa17.8■□□□□ 0.44
SEC13-209ENST00000397117 PRIM1P49642 420 aaKnown RBP17.8■□□□□ 0.44
SEC13-209ENST00000397117 C1QTNF8P60827 252 aa17.8■□□□□ 0.44
SEC13-209ENST00000397117 GPR162Q16538 588 aa17.8■□□□□ 0.44
SEC13-209ENST00000397117 GGNBP2Q9H3C7 697 aa17.8■□□□□ 0.44
SEC13-209ENST00000397117 SHANK3Q9BYB0 1731 aa17.79■□□□□ 0.44
SEC13-209ENST00000397117 POLD1P28340 1107 aa17.79■□□□□ 0.44
SEC13-209ENST00000397117 KCNQ4P56696 695 aa17.79■□□□□ 0.44
SEC13-209ENST00000397117 DOT1LQ8TEK3 1739 aa17.79■□□□□ 0.44
SEC13-209ENST00000397117 MAP3K19Q56UN5 1328 aa17.78■□□□□ 0.44
SEC13-209ENST00000397117 TFCP2L1Q9NZI6 479 aa17.78■□□□□ 0.44
SEC13-209ENST00000397117 FBLN1P23142 703 aa17.77■□□□□ 0.44
SEC13-209ENST00000397117 PPP2R1AP30153 589 aa17.77■□□□□ 0.44
SEC13-209ENST00000397117 HOXC9P31274 260 aa17.77■□□□□ 0.44
SEC13-209ENST00000397117 TNNT2P45379 298 aaPredicted RBP17.76■□□□□ 0.43
SEC13-209ENST00000397117 ZCRB1Q8TBF4 217 aaKnown RBP17.76■□□□□ 0.43
SEC13-209ENST00000397117 SYTL4Q96C24 671 aaPredicted RBP17.76■□□□□ 0.43
SEC13-209ENST00000397117 CCDC184Q52MB2 194 aa17.76■□□□□ 0.43
SEC13-209ENST00000397117 COG3Q96JB2 828 aa17.76■□□□□ 0.43
SEC13-209ENST00000397117 KIF20BQ96Q89 1820 aa17.75■□□□□ 0.43
SEC13-209ENST00000397117 SENP3-EIF4A1A0A087X0R7 540 aa17.75■□□□□ 0.43
SEC13-209ENST00000397117 KLHL34Q8N239 644 aa17.75■□□□□ 0.43
SEC13-209ENST00000397117 AMPHP49418 695 aa17.74■□□□□ 0.43
SEC13-209ENST00000397117 NLGN2Q8NFZ4 835 aa17.74■□□□□ 0.43
SEC13-209ENST00000397117 MEGF6O75095 1541 aa17.74■□□□□ 0.43
SEC13-209ENST00000397117 CCNL1Q9UK58 526 aaPredicted RBP17.72■□□□□ 0.43
SEC13-209ENST00000397117 NBPF6Q5VWK0 638 aa17.72■□□□□ 0.43
SEC13-209ENST00000397117 COL23A1Q86Y22 540 aaPredicted RBP17.72■□□□□ 0.43
SEC13-209ENST00000397117 NBPF4Q96M43 638 aa17.72■□□□□ 0.43
SEC13-209ENST00000397117 YTHDC1Q96MU7 727 aaKnown RBP17.72■□□□□ 0.43
SEC13-209ENST00000397117 ANKRD26Q9UPS8 1709 aa17.71■□□□□ 0.43
SEC13-209ENST00000397117 PELP1Q8IZL8 1130 aaKnown RBP17.71■□□□□ 0.43
SEC13-209ENST00000397117 RTL1A6NKG5 1358 aa17.69■□□□□ 0.42
SEC13-209ENST00000397117 FAM9BQ8IZU0 186 aa17.69■□□□□ 0.42
SEC13-209ENST00000397117 YBX3P16989 372 aaKnown RBP eCLIP17.69■□□□□ 0.429e-10■■□□□ 14.4
SEC13-209ENST00000397117 GIGYF1O75420 1035 aaPredicted RBP17.68■□□□□ 0.42
SEC13-209ENST00000397117 RRS1Q15050 365 aaKnown RBP17.68■□□□□ 0.42
SEC13-209ENST00000397117 TAF1LQ8IZX4 1826 aa17.67■□□□□ 0.42
SEC13-209ENST00000397117 MSH5O43196 834 aa17.67■□□□□ 0.42
SEC13-209ENST00000397117 GRIN3BO60391 1043 aa17.67■□□□□ 0.42
SEC13-209ENST00000397117 MTHFSP49914 203 aa17.67■□□□□ 0.42
SEC13-209ENST00000397117 USHBP1Q8N6Y0 703 aa17.67■□□□□ 0.42
SEC13-209ENST00000397117 CFAP53Q96M91 514 aa17.67■□□□□ 0.42
SEC13-209ENST00000397117 PNISRQ8TF01 805 aaKnown RBP17.66■□□□□ 0.42
SEC13-209ENST00000397117 C5P01031 1676 aa17.66■□□□□ 0.42
SEC13-209ENST00000397117 RAPGEF4Q8WZA2 1011 aa17.65■□□□□ 0.42
SEC13-209ENST00000397117 GOLGB1Q14789 3259 aaKnown RBP17.65■□□□□ 0.42
SEC13-209ENST00000397117 TATP17735 454 aaPredicted RBP17.64■□□□□ 0.41
SEC13-209ENST00000397117 MSL1Q68DK7 614 aa17.64■□□□□ 0.41
SEC13-209ENST00000397117 ITGB4P16144 1822 aa17.63■□□□□ 0.41
SEC13-209ENST00000397117 WDR43Q15061 677 aaKnown RBP eCLIP17.63■□□□□ 0.411e-6■■■□□ 17.5
SEC13-209ENST00000397117 CD2APQ9Y5K6 639 aa17.63■□□□□ 0.41
SEC13-209ENST00000397117 INSRP06213 1382 aa17.63■□□□□ 0.41
SEC13-209ENST00000397117 HSP90AB2PQ58FF8 381 aa17.62■□□□□ 0.41
SEC13-209ENST00000397117 FLAD1Q8NFF5 587 aa17.62■□□□□ 0.41
SEC13-209ENST00000397117 PPM1GO15355 546 aaPredicted RBP17.61■□□□□ 0.41
SEC13-209ENST00000397117 HMGB2P26583 209 aaKnown RBP17.61■□□□□ 0.41
SEC13-209ENST00000397117 POLKQ9UBT6 870 aa17.61■□□□□ 0.41
SEC13-209ENST00000397117 PCDH11XQ9BZA7 1347 aa17.61■□□□□ 0.41
SEC13-209ENST00000397117 PCDH11YQ9BZA8 1340 aa17.61■□□□□ 0.41
SEC13-209ENST00000397117 SMG6Q86US8 1419 aaKnown RBP17.61■□□□□ 0.41
SEC13-209ENST00000397117 CYP27B1O15528 508 aa17.61■□□□□ 0.41
SEC13-209ENST00000397117 PALLDQ8WX93 1383 aa17.61■□□□□ 0.41
SEC13-209ENST00000397117 TOGARAM1Q9Y4F4 1720 aa17.6■□□□□ 0.41
SEC13-209ENST00000397117 KIF24Q5T7B8 1368 aa17.6■□□□□ 0.41
SEC13-209ENST00000397117 MPRIPQ6WCQ1 1025 aa17.6■□□□□ 0.41
SEC13-209ENST00000397117 C4BP0C0L5 1744 aa17.59■□□□□ 0.41
SEC13-209ENST00000397117 UBR3Q6ZT12 1888 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms