RNA–Protein interactions for RNA: ENST00000397108.8

FGFR1-208, Transcript of fibroblast growth factor receptor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene FGFR1, Length 2,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-208ENST00000397108 NSD3Q9BZ95 1437 aa14.88□□□□□ -0.03
FGFR1-208ENST00000397108 ZC3H6P61129 1189 aaKnown RBP14.88□□□□□ -0.03
FGFR1-208ENST00000397108 UNC5CLQ8IV45 518 aa14.88□□□□□ -0.03
FGFR1-208ENST00000397108 GRPEL1Q9HAV7 217 aa14.88□□□□□ -0.03
FGFR1-208ENST00000397108 ZRANB1Q9UGI0 708 aa14.88□□□□□ -0.03
FGFR1-208ENST00000397108 COL18A1P39060 1754 aa14.88□□□□□ -0.03
FGFR1-208ENST00000397108 CCDC146Q8IYE0 955 aa14.88□□□□□ -0.03
FGFR1-208ENST00000397108 TRPC5Q9UL62 973 aaPredicted RBP14.88□□□□□ -0.03
FGFR1-208ENST00000397108 MRE11P49959 708 aa14.87□□□□□ -0.03
FGFR1-208ENST00000397108 TRIM44Q96DX7 344 aaPredicted RBP14.87□□□□□ -0.03
FGFR1-208ENST00000397108 QTRT2Q9H974 415 aaKnown RBP14.87□□□□□ -0.03
FGFR1-208ENST00000397108 SPINK5Q9NQ38 1064 aaPredicted RBP14.87□□□□□ -0.03
FGFR1-208ENST00000397108 LTN1O94822 1766 aa14.87□□□□□ -0.03
FGFR1-208ENST00000397108 BLMP54132 1417 aaPredicted RBP14.87□□□□□ -0.03
FGFR1-208ENST00000397108 RBM10P98175 930 aaKnown RBP14.87□□□□□ -0.03
FGFR1-208ENST00000397108 ABCC6O95255 1503 aa14.86□□□□□ -0.03
FGFR1-208ENST00000397108 CDK12Q9NYV4 1490 aaPredicted RBP14.86□□□□□ -0.03
FGFR1-208ENST00000397108 ANKRD26Q9UPS8 1709 aa14.86□□□□□ -0.03
FGFR1-208ENST00000397108 WDR43Q15061 677 aaKnown RBP eCLIP14.86□□□□□ -0.03
FGFR1-208ENST00000397108 ARID3AQ99856 593 aa14.86□□□□□ -0.03
FGFR1-208ENST00000397108 UPF2Q9HAU5 1272 aaKnown RBP14.86□□□□□ -0.03
FGFR1-208ENST00000397108 BTG4Q9NY30 223 aa14.86□□□□□ -0.03
FGFR1-208ENST00000397108 COG6Q9Y2V7 657 aa14.86□□□□□ -0.03
FGFR1-208ENST00000397108 AATKQ6ZMQ8 1374 aa14.85□□□□□ -0.03
FGFR1-208ENST00000397108 FYB1O15117 783 aa14.85□□□□□ -0.03
FGFR1-208ENST00000397108 RXRBP28702 533 aa14.85□□□□□ -0.03
FGFR1-208ENST00000397108 CHRNA2Q15822 529 aa14.85□□□□□ -0.03
FGFR1-208ENST00000397108 CAMTA1Q9Y6Y1 1673 aa14.85□□□□□ -0.03
FGFR1-208ENST00000397108 RBM6P78332 1123 aaKnown RBP14.85□□□□□ -0.03
FGFR1-208ENST00000397108 PANK1Q8TE04 598 aa14.85□□□□□ -0.03
FGFR1-208ENST00000397108 COG3Q96JB2 828 aa14.84□□□□□ -0.03
FGFR1-208ENST00000397108 RGPD5Q99666 1765 aa14.84□□□□□ -0.03
FGFR1-208ENST00000397108 GLI3P10071 1580 aa14.84□□□□□ -0.03
FGFR1-208ENST00000397108 VPS72Q15906 364 aa14.84□□□□□ -0.03
FGFR1-208ENST00000397108 ARHGEF25Q86VW2 580 aa14.84□□□□□ -0.03
FGFR1-208ENST00000397108 KIAA1211Q6ZU35 1233 aa14.83□□□□□ -0.03
FGFR1-208ENST00000397108 PDCL3Q9H2J4 239 aa14.83□□□□□ -0.03
FGFR1-208ENST00000397108 CGNL1Q0VF96 1302 aa14.83□□□□□ -0.03
FGFR1-208ENST00000397108 SOX12O15370 315 aa14.83□□□□□ -0.04
FGFR1-208ENST00000397108 CANXP27824 592 aaKnown RBP14.83□□□□□ -0.04
FGFR1-208ENST00000397108 TBC1D32Q96NH3 1257 aa14.83□□□□□ -0.04
FGFR1-208ENST00000397108 GJD4Q96KN9 370 aaPredicted RBP14.82□□□□□ -0.04
FGFR1-208ENST00000397108 SLFN5Q08AF3 891 aa14.82□□□□□ -0.04
FGFR1-208ENST00000397108 GGNBP2Q9H3C7 697 aa14.82□□□□□ -0.04
FGFR1-208ENST00000397108 COL5A2P05997 1499 aaPredicted RBP14.82□□□□□ -0.04
FGFR1-208ENST00000397108 GAS2L3Q86XJ1 694 aa14.81□□□□□ -0.04
FGFR1-208ENST00000397108 RGS12O14924 1447 aa14.8□□□□□ -0.04
FGFR1-208ENST00000397108 MAPK8IP3Q9UPT6 1336 aa14.8□□□□□ -0.04
FGFR1-208ENST00000397108 ZBTB7CA1YPR0 619 aa14.8□□□□□ -0.04
FGFR1-208ENST00000397108 TPM2P07951 284 aa14.79□□□□□ -0.04
FGFR1-208ENST00000397108 CLUAP1Q96AJ1 413 aa14.79□□□□□ -0.04
FGFR1-208ENST00000397108 NSD2O96028 1365 aa14.79□□□□□ -0.04
FGFR1-208ENST00000397108 CHMP5Q9NZZ3 219 aa14.79□□□□□ -0.04
FGFR1-208ENST00000397108 SPATA31A5Q5VU36 1347 aa14.79□□□□□ -0.04
FGFR1-208ENST00000397108 SPATA31A7Q8IWB4 1347 aa14.79□□□□□ -0.04
FGFR1-208ENST00000397108 APAF1O14727 1248 aa14.78□□□□□ -0.04
FGFR1-208ENST00000397108 MFAP1P55081 439 aaKnown RBP14.78□□□□□ -0.04
FGFR1-208ENST00000397108 STRN4Q9NRL3 753 aa14.78□□□□□ -0.04
FGFR1-208ENST00000397108 EVA1CP58658 441 aa14.78□□□□□ -0.04
FGFR1-208ENST00000397108 FAM13BQ9NYF5 915 aa14.78□□□□□ -0.04
FGFR1-208ENST00000397108 PRDM4Q9UKN5 801 aa14.78□□□□□ -0.04
FGFR1-208ENST00000397108 AXIN2Q9Y2T1 843 aa14.78□□□□□ -0.04
FGFR1-208ENST00000397108 CCDC9Q9Y3X0 531 aaKnown RBP14.78□□□□□ -0.04
FGFR1-208ENST00000397108 ZNF521Q96K83 1311 aa14.77□□□□□ -0.04
FGFR1-208ENST00000397108 SPATA31A1Q5TZJ5 1347 aa14.77□□□□□ -0.05
FGFR1-208ENST00000397108 PPP2R1AP30153 589 aa14.76□□□□□ -0.05
FGFR1-208ENST00000397108 KNSTRNQ9Y448 316 aa14.76□□□□□ -0.05
FGFR1-208ENST00000397108 THSD7AQ9UPZ6 1657 aa14.76□□□□□ -0.05
FGFR1-208ENST00000397108 MAP2P11137 1827 aaKnown RBP14.76□□□□□ -0.05
FGFR1-208ENST00000397108 RTL1A6NKG5 1358 aa14.76□□□□□ -0.05
FGFR1-208ENST00000397108 FAM208AQ9UK61 1670 aaKnown RBP14.76□□□□□ -0.05
FGFR1-208ENST00000397108 BRWD3Q6RI45 1802 aa14.76□□□□□ -0.05
FGFR1-208ENST00000397108 WNK3Q9BYP7 1800 aa14.76□□□□□ -0.05
FGFR1-208ENST00000397108 CRB1P82279 1406 aa14.76□□□□□ -0.05
FGFR1-208ENST00000397108 MAP3K19Q56UN5 1328 aa14.76□□□□□ -0.05
FGFR1-208ENST00000397108 LARP1Q6PKG0 1096 aaKnown RBP14.75□□□□□ -0.05
FGFR1-208ENST00000397108 PDZRN3Q9UPQ7 1066 aa14.75□□□□□ -0.05
FGFR1-208ENST00000397108 PEAK1Q9H792 1746 aa14.75□□□□□ -0.05
FGFR1-208ENST00000397108 ONECUT3O60422 494 aaPredicted RBP14.75□□□□□ -0.05
FGFR1-208ENST00000397108 TNNQ9UQP3 1299 aa14.75□□□□□ -0.05
FGFR1-208ENST00000397108 WDR17Q8IZU2 1322 aa14.75□□□□□ -0.05
FGFR1-208ENST00000397108 CALD1Q05682 793 aaKnown RBP14.74□□□□□ -0.05
FGFR1-208ENST00000397108 IP6K1Q92551 441 aa14.74□□□□□ -0.05
FGFR1-208ENST00000397108 PCDHB15Q9Y5E8 787 aa14.74□□□□□ -0.05
FGFR1-208ENST00000397108 KIF24Q5T7B8 1368 aa14.74□□□□□ -0.05
FGFR1-208ENST00000397108 FBLN1P23142 703 aa14.74□□□□□ -0.05
FGFR1-208ENST00000397108 AMER1Q5JTC6 1135 aaPredicted RBP14.74□□□□□ -0.05
FGFR1-208ENST00000397108 RIPK4P57078 832 aa14.73□□□□□ -0.05
FGFR1-208ENST00000397108 C22orf23Q9BZE7 217 aa14.73□□□□□ -0.05
FGFR1-208ENST00000397108 RRS1Q15050 365 aaKnown RBP14.73□□□□□ -0.05
FGFR1-208ENST00000397108 FOXD4L1Q9NU39 408 aa14.73□□□□□ -0.05
FGFR1-208ENST00000397108 ERBB3P21860 1342 aa14.73□□□□□ -0.05
FGFR1-208ENST00000397108 DDX11L8A8MPP1 907 aa14.72□□□□□ -0.05
FGFR1-208ENST00000397108 BCL2L13Q9BXK5 485 aa14.72□□□□□ -0.05
FGFR1-208ENST00000397108 HOXC9P31274 260 aa14.72□□□□□ -0.05
FGFR1-208ENST00000397108 AMPHP49418 695 aa14.72□□□□□ -0.05
FGFR1-208ENST00000397108 THRAP3Q9Y2W1 955 aaKnown RBP14.72□□□□□ -0.05
FGFR1-208ENST00000397108 NPC1L1Q9UHC9 1359 aa14.72□□□□□ -0.05
FGFR1-208ENST00000397108 SOCS7O14512 581 aa14.71□□□□□ -0.05
FGFR1-208ENST00000397108 FAM98CQ17RN3 349 aaKnown RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms