RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 KAT6BQ8WYB5 2073 aa19.17■□□□□ 0.66
SEC13-205ENST00000397101 HMGB2P26583 209 aaKnown RBP19.17■□□□□ 0.66
SEC13-205ENST00000397101 NLGN2Q8NFZ4 835 aa19.17■□□□□ 0.66
SEC13-205ENST00000397101 TERF2IPQ9NYB0 399 aa19.17■□□□□ 0.66
SEC13-205ENST00000397101 NSD2O96028 1365 aa19.17■□□□□ 0.66
SEC13-205ENST00000397101 KLHL34Q8N239 644 aa19.16■□□□□ 0.66
SEC13-205ENST00000397101 LY75O60449 1722 aa19.16■□□□□ 0.66
SEC13-205ENST00000397101 PRIM1P49642 420 aaKnown RBP19.15■□□□□ 0.66
SEC13-205ENST00000397101 TMC1Q8TDI8 760 aa19.15■□□□□ 0.66
SEC13-205ENST00000397101 SLC12A5Q9H2X9 1139 aa19.15■□□□□ 0.66
SEC13-205ENST00000397101 A0A1W2PP64 1363 aa19.15■□□□□ 0.66
SEC13-205ENST00000397101 PELP1Q8IZL8 1130 aaKnown RBP19.14■□□□□ 0.65
SEC13-205ENST00000397101 TUBGCP6Q96RT7 1819 aa19.14■□□□□ 0.65
SEC13-205ENST00000397101 ZCRB1Q8TBF4 217 aaKnown RBP19.13■□□□□ 0.65
SEC13-205ENST00000397101 SYTL4Q96C24 671 aaPredicted RBP19.13■□□□□ 0.65
SEC13-205ENST00000397101 CGNL1Q0VF96 1302 aa19.12■□□□□ 0.65
SEC13-205ENST00000397101 YBX3P16989 372 aaKnown RBP eCLIP19.12■□□□□ 0.651e-7■□□□□ 8.2
SEC13-205ENST00000397101 CCNL1Q9UK58 526 aaPredicted RBP19.12■□□□□ 0.65
SEC13-205ENST00000397101 CARD11Q9BXL7 1154 aa19.11■□□□□ 0.65
SEC13-205ENST00000397101 HOXC9P31274 260 aa19.1■□□□□ 0.65
SEC13-205ENST00000397101 KCNQ4P56696 695 aa19.1■□□□□ 0.65
SEC13-205ENST00000397101 COL23A1Q86Y22 540 aaPredicted RBP19.1■□□□□ 0.65
SEC13-205ENST00000397101 CD2APQ9Y5K6 639 aa19.1■□□□□ 0.65
SEC13-205ENST00000397101 USP47Q96K76 1375 aa19.09■□□□□ 0.65
SEC13-205ENST00000397101 DOT1LQ8TEK3 1739 aa19.09■□□□□ 0.65
SEC13-205ENST00000397101 MAP3K19Q56UN5 1328 aa19.09■□□□□ 0.65
SEC13-205ENST00000397101 FLAD1Q8NFF5 587 aa19.09■□□□□ 0.65
SEC13-205ENST00000397101 LTV1Q96GA3 475 aaPredicted RBP19.09■□□□□ 0.65
SEC13-205ENST00000397101 COG3Q96JB2 828 aa19.08■□□□□ 0.64
SEC13-205ENST00000397101 RTL1A6NKG5 1358 aa19.07■□□□□ 0.64
SEC13-205ENST00000397101 MEGF6O75095 1541 aa19.07■□□□□ 0.64
SEC13-205ENST00000397101 ATP10DQ9P241 1426 aa19.07■□□□□ 0.64
SEC13-205ENST00000397101 SLC24A1O60721 1099 aa19.06■□□□□ 0.64
SEC13-205ENST00000397101 AMPHP49418 695 aa19.06■□□□□ 0.64
SEC13-205ENST00000397101 ADCY9O60503 1353 aa19.06■□□□□ 0.64
SEC13-205ENST00000397101 MSH5O43196 834 aa19.03■□□□□ 0.64
SEC13-205ENST00000397101 GPBP1L1Q9HC44 474 aaPredicted RBP19.03■□□□□ 0.64
SEC13-205ENST00000397101 NBPF6Q5VWK0 638 aa19.02■□□□□ 0.64
SEC13-205ENST00000397101 NBPF4Q96M43 638 aa19.02■□□□□ 0.64
SEC13-205ENST00000397101 RAPGEF4Q8WZA2 1011 aa19.01■□□□□ 0.63
SEC13-205ENST00000397101 HSPA6P17066 643 aa19■□□□□ 0.63
SEC13-205ENST00000397101 MSL1Q68DK7 614 aa19■□□□□ 0.63
SEC13-205ENST00000397101 TESK2Q96S53 571 aa19■□□□□ 0.63
SEC13-205ENST00000397101 C5P01031 1676 aa19■□□□□ 0.63
SEC13-205ENST00000397101 SMG6Q86US8 1419 aaKnown RBP19■□□□□ 0.63
SEC13-205ENST00000397101 PCDH11XQ9BZA7 1347 aa19■□□□□ 0.63
SEC13-205ENST00000397101 PCDH11YQ9BZA8 1340 aa19■□□□□ 0.63
SEC13-205ENST00000397101 PALLDQ8WX93 1383 aa18.99■□□□□ 0.63
SEC13-205ENST00000397101 NSD3Q9BZ95 1437 aa18.99■□□□□ 0.63
SEC13-205ENST00000397101 KIF24Q5T7B8 1368 aa18.98■□□□□ 0.63
SEC13-205ENST00000397101 TATP17735 454 aaPredicted RBP18.98■□□□□ 0.63
SEC13-205ENST00000397101 FBLN1P23142 703 aa18.98■□□□□ 0.63
SEC13-205ENST00000397101 SMARCC1Q92922 1105 aaPredicted RBP18.98■□□□□ 0.63
SEC13-205ENST00000397101 RGPD2P0DJD1 1756 aa18.98■□□□□ 0.63
SEC13-205ENST00000397101 INSRP06213 1382 aa18.96■□□□□ 0.63
SEC13-205ENST00000397101 TAF1LQ8IZX4 1826 aa18.95■□□□□ 0.62
SEC13-205ENST00000397101 FYB1O15117 783 aa18.95■□□□□ 0.62
SEC13-205ENST00000397101 RRS1Q15050 365 aaKnown RBP18.95■□□□□ 0.62
SEC13-205ENST00000397101 AK7Q96M32 723 aa18.94■□□□□ 0.62
SEC13-205ENST00000397101 C4BP0C0L5 1744 aa18.94■□□□□ 0.62
SEC13-205ENST00000397101 SSFA2P28290 1259 aa18.93■□□□□ 0.62
SEC13-205ENST00000397101 MPRIPQ6WCQ1 1025 aa18.93■□□□□ 0.62
SEC13-205ENST00000397101 USHBP1Q8N6Y0 703 aa18.93■□□□□ 0.62
SEC13-205ENST00000397101 IGSF1Q8N6C5 1336 aa18.93■□□□□ 0.62
SEC13-205ENST00000397101 FLT4P35916 1363 aa18.93■□□□□ 0.62
SEC13-205ENST00000397101 ST20-MTHFSA0A0A6YYL1 179 aa18.92■□□□□ 0.62
SEC13-205ENST00000397101 CYP27B1O15528 508 aa18.92■□□□□ 0.62
SEC13-205ENST00000397101 NKX1-1Q15270 411 aaPredicted RBP18.92■□□□□ 0.62
SEC13-205ENST00000397101 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.9■□□□□ 0.62
SEC13-205ENST00000397101 KIF3CO14782 793 aa18.9■□□□□ 0.62
SEC13-205ENST00000397101 HSP90AB2PQ58FF8 381 aa18.9■□□□□ 0.62
SEC13-205ENST00000397101 AMIGO3Q86WK7 504 aa18.9■□□□□ 0.62
SEC13-205ENST00000397101 TOGARAM1Q9Y4F4 1720 aa18.9■□□□□ 0.62
SEC13-205ENST00000397101 NCAPD2Q15021 1401 aa18.9■□□□□ 0.62
SEC13-205ENST00000397101 CICQ96RK0 1608 aaPredicted RBP18.89■□□□□ 0.62
SEC13-205ENST00000397101 UBR3Q6ZT12 1888 aa18.89■□□□□ 0.61
SEC13-205ENST00000397101 GGNBP2Q9H3C7 697 aa18.89■□□□□ 0.61
SEC13-205ENST00000397101 ZNF526Q8TF50 670 aaPredicted RBP18.88■□□□□ 0.61
SEC13-205ENST00000397101 PIGBQ92521 554 aa18.88■□□□□ 0.61
SEC13-205ENST00000397101 LOC102724428A0A0B4J2F2 783 aa18.87■□□□□ 0.61
SEC13-205ENST00000397101 SIK1P57059 783 aa18.87■□□□□ 0.61
SEC13-205ENST00000397101 EIF4G2P78344 907 aaKnown RBP eCLIP18.87■□□□□ 0.61
SEC13-205ENST00000397101 PKD1L3Q7Z443 1732 aa18.87■□□□□ 0.61
SEC13-205ENST00000397101 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.86■□□□□ 0.61
SEC13-205ENST00000397101 MAP2P11137 1827 aaKnown RBP18.86■□□□□ 0.61
SEC13-205ENST00000397101 ITGB4P16144 1822 aa18.86■□□□□ 0.61
SEC13-205ENST00000397101 PHF14O94880 888 aa18.85■□□□□ 0.61
SEC13-205ENST00000397101 APLP1P51693 650 aa18.85■□□□□ 0.61
SEC13-205ENST00000397101 TGFB2P61812 414 aa18.84■□□□□ 0.61
SEC13-205ENST00000397101 TMF1P82094 1093 aa18.84■□□□□ 0.61
SEC13-205ENST00000397101 LINC00116Q8NCU8 138 aa18.84■□□□□ 0.61
SEC13-205ENST00000397101 SPG7Q9UQ90 795 aa18.84■□□□□ 0.61
SEC13-205ENST00000397101 PLEKHG2Q9H7P9 1386 aa18.83■□□□□ 0.61
SEC13-205ENST00000397101 TOMM70O94826 608 aa18.82■□□□□ 0.6
SEC13-205ENST00000397101 HSPA5P11021 654 aaKnown RBP18.82■□□□□ 0.6
SEC13-205ENST00000397101 CDCA8Q53HL2 280 aa18.81■□□□□ 0.6
SEC13-205ENST00000397101 TMOD3Q9NYL9 352 aa18.81■□□□□ 0.6
SEC13-205ENST00000397101 PXDNLA1KZ92 1463 aa18.8■□□□□ 0.6
SEC13-205ENST00000397101 GNPATO15228 680 aa18.8■□□□□ 0.6
SEC13-205ENST00000397101 KIF13BQ9NQT8 1826 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms