RNA–Protein interactions for RNA: ENST00000396735.6

PPM1N-201, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1N (putative), humanhuman

TSL 1 (best) BASIC

Gene PPM1N, Length 895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1N-201ENST00000396735 PANK3Q9H999 370 aa18.99■□□□□ 0.63
PPM1N-201ENST00000396735 CGNL1Q0VF96 1302 aa18.99■□□□□ 0.63
PPM1N-201ENST00000396735 CASZ1Q86V15 1759 aa18.98■□□□□ 0.63
PPM1N-201ENST00000396735 PPM1GO15355 546 aaPredicted RBP18.98■□□□□ 0.63
PPM1N-201ENST00000396735 TXNRD1Q16881 649 aa18.98■□□□□ 0.63
PPM1N-201ENST00000396735 NBPF14Q5TI25 921 aa18.98■□□□□ 0.63
PPM1N-201ENST00000396735 PDGFDQ9GZP0 370 aaPredicted RBP18.98■□□□□ 0.63
PPM1N-201ENST00000396735 TNNT2P45379 298 aaPredicted RBP18.97■□□□□ 0.63
PPM1N-201ENST00000396735 SMG6Q86US8 1419 aaKnown RBP18.97■□□□□ 0.63
PPM1N-201ENST00000396735 PAPPAQ13219 1627 aa18.96■□□□□ 0.63
PPM1N-201ENST00000396735 KIF24Q5T7B8 1368 aa18.96■□□□□ 0.63
PPM1N-201ENST00000396735 ZCRB1Q8TBF4 217 aaKnown RBP18.96■□□□□ 0.63
PPM1N-201ENST00000396735 POLKQ9UBT6 870 aa18.96■□□□□ 0.63
PPM1N-201ENST00000396735 NSD2O96028 1365 aa18.94■□□□□ 0.62
PPM1N-201ENST00000396735 KAT6BQ8WYB5 2073 aa18.94■□□□□ 0.62
PPM1N-201ENST00000396735 NCAPD2Q15021 1401 aa18.93■□□□□ 0.62
PPM1N-201ENST00000396735 PKD1L3Q7Z443 1732 aa18.93■□□□□ 0.62
PPM1N-201ENST00000396735 TOGARAM1Q9Y4F4 1720 aa18.93■□□□□ 0.62
PPM1N-201ENST00000396735 KIF7Q2M1P5 1343 aa18.93■□□□□ 0.62
PPM1N-201ENST00000396735 PRIM1P49642 420 aaKnown RBP18.92■□□□□ 0.62
PPM1N-201ENST00000396735 LRRC4BQ9NT99 713 aa18.92■□□□□ 0.62
PPM1N-201ENST00000396735 WASHC2AQ641Q2 1341 aa18.92■□□□□ 0.62
PPM1N-201ENST00000396735 RAPGEF4Q8WZA2 1011 aa18.91■□□□□ 0.62
PPM1N-201ENST00000396735 TATP17735 454 aaPredicted RBP18.9■□□□□ 0.62
PPM1N-201ENST00000396735 KCNQ4P56696 695 aa18.9■□□□□ 0.62
PPM1N-201ENST00000396735 SYTL4Q96C24 671 aaPredicted RBP18.9■□□□□ 0.62
PPM1N-201ENST00000396735 EYA1Q99502 592 aa18.9■□□□□ 0.62
PPM1N-201ENST00000396735 LY75O60449 1722 aa18.9■□□□□ 0.62
PPM1N-201ENST00000396735 CYP27B1O15528 508 aa18.88■□□□□ 0.61
PPM1N-201ENST00000396735 EIF4A2Q14240 407 aaKnown RBP18.88■□□□□ 0.61
PPM1N-201ENST00000396735 ZNF827Q17R98 1081 aa18.88■□□□□ 0.61
PPM1N-201ENST00000396735 SLC15A2Q16348 729 aa18.87■□□□□ 0.61
PPM1N-201ENST00000396735 TUBGCP6Q96RT7 1819 aa18.87■□□□□ 0.61
PPM1N-201ENST00000396735 ITGB4P16144 1822 aa18.86■□□□□ 0.61
PPM1N-201ENST00000396735 ZBTB7AO95365 584 aa18.86■□□□□ 0.61
PPM1N-201ENST00000396735 STK32BQ9NY57 414 aa18.86■□□□□ 0.61
PPM1N-201ENST00000396735 PCDH11XQ9BZA7 1347 aa18.84■□□□□ 0.61
PPM1N-201ENST00000396735 PCDH11YQ9BZA8 1340 aa18.84■□□□□ 0.61
PPM1N-201ENST00000396735 SPON1Q9HCB6 807 aa18.84■□□□□ 0.61
PPM1N-201ENST00000396735 AMER1Q5JTC6 1135 aaPredicted RBP18.83■□□□□ 0.6
PPM1N-201ENST00000396735 MORC1Q86VD1 984 aa18.83■□□□□ 0.6
PPM1N-201ENST00000396735 ATF5Q9Y2D1 282 aaPredicted RBP18.82■□□□□ 0.6
PPM1N-201ENST00000396735 KNSTRNQ9Y448 316 aa18.82■□□□□ 0.6
PPM1N-201ENST00000396735 AKT1S1Q96B36 256 aa18.81■□□□□ 0.6
PPM1N-201ENST00000396735 QSER1Q2KHR3 1735 aa18.8■□□□□ 0.6
PPM1N-201ENST00000396735 IGSF1Q8N6C5 1336 aa18.8■□□□□ 0.6
PPM1N-201ENST00000396735 PTGER2P43116 358 aa18.8■□□□□ 0.6
PPM1N-201ENST00000396735 PER1O15534 1290 aaPredicted RBP18.79■□□□□ 0.6
PPM1N-201ENST00000396735 SLC27A3Q5K4L6 730 aa18.79■□□□□ 0.6
PPM1N-201ENST00000396735 C5P01031 1676 aa18.79■□□□□ 0.6
PPM1N-201ENST00000396735 MPRIPQ6WCQ1 1025 aa18.78■□□□□ 0.6
PPM1N-201ENST00000396735 AEBP1Q8IUX7 1158 aa18.78■□□□□ 0.6
PPM1N-201ENST00000396735 TAF1LQ8IZX4 1826 aa18.77■□□□□ 0.6
PPM1N-201ENST00000396735 NKX1-1Q15270 411 aaPredicted RBP18.77■□□□□ 0.6
PPM1N-201ENST00000396735 PPP1R1BQ9UD71 204 aaPredicted RBP18.77■□□□□ 0.6
PPM1N-201ENST00000396735 SPG7Q9UQ90 795 aa18.77■□□□□ 0.6
PPM1N-201ENST00000396735 PHKG2P15735 406 aa18.76■□□□□ 0.59
PPM1N-201ENST00000396735 SGIP1Q9BQI5 828 aa18.76■□□□□ 0.59
PPM1N-201ENST00000396735 CCNL1Q9UK58 526 aaPredicted RBP18.76■□□□□ 0.59
PPM1N-201ENST00000396735 PNPLA7Q6ZV29 1317 aa18.75■□□□□ 0.59
PPM1N-201ENST00000396735 CC2D1BQ5T0F9 858 aaKnown RBP18.75■□□□□ 0.59
PPM1N-201ENST00000396735 PIGBQ92521 554 aa18.75■□□□□ 0.59
PPM1N-201ENST00000396735 PALLDQ8WX93 1383 aa18.75■□□□□ 0.59
PPM1N-201ENST00000396735 CNGB1Q14028 1251 aaPredicted RBP18.74■□□□□ 0.59
PPM1N-201ENST00000396735 MTFR1LQ9H019 292 aa18.74■□□□□ 0.59
PPM1N-201ENST00000396735 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.74■□□□□ 0.59
PPM1N-201ENST00000396735 IL13P35225 146 aa18.73■□□□□ 0.59
PPM1N-201ENST00000396735 COL24A1Q17RW2 1714 aa18.73■□□□□ 0.59
PPM1N-201ENST00000396735 MTHFSP49914 203 aa18.71■□□□□ 0.59
PPM1N-201ENST00000396735 IFNL2Q8IZJ0 200 aa18.71■□□□□ 0.59
PPM1N-201ENST00000396735 TFCP2L1Q9NZI6 479 aa18.71■□□□□ 0.59
PPM1N-201ENST00000396735 KDM6AO15550 1401 aaPredicted RBP18.71■□□□□ 0.59
PPM1N-201ENST00000396735 C4BP0C0L5 1744 aa18.71■□□□□ 0.59
PPM1N-201ENST00000396735 SMIM5Q71RC9 77 aa18.7■□□□□ 0.58
PPM1N-201ENST00000396735 AMIGO3Q86WK7 504 aa18.7■□□□□ 0.58
PPM1N-201ENST00000396735 ASAP1Q9ULH1 1129 aa18.7■□□□□ 0.58
PPM1N-201ENST00000396735 SULT6B1Q6IMI4 303 aa18.69■□□□□ 0.58
PPM1N-201ENST00000396735 COL23A1Q86Y22 540 aaPredicted RBP18.68■□□□□ 0.58
PPM1N-201ENST00000396735 FHDC1Q9C0D6 1143 aaPredicted RBP18.68■□□□□ 0.58
PPM1N-201ENST00000396735 TMOD3Q9NYL9 352 aa18.68■□□□□ 0.58
PPM1N-201ENST00000396735 KDRP35968 1356 aa18.68■□□□□ 0.58
PPM1N-201ENST00000396735 COL3A1P02461 1466 aaPredicted RBP18.67■□□□□ 0.58
PPM1N-201ENST00000396735 ZNF530Q6P9A1 599 aaPredicted RBP18.67■□□□□ 0.58
PPM1N-201ENST00000396735 PLEKHG2Q9H7P9 1386 aa18.67■□□□□ 0.58
PPM1N-201ENST00000396735 ATG3Q9NT62 314 aa18.66■□□□□ 0.58
PPM1N-201ENST00000396735 UBR3Q6ZT12 1888 aa18.66■□□□□ 0.58
PPM1N-201ENST00000396735 HMOX1P09601 288 aa18.65■□□□□ 0.58
PPM1N-201ENST00000396735 ITPK1Q13572 414 aa18.65■□□□□ 0.58
PPM1N-201ENST00000396735 PLEKHO1Q53GL0 409 aaPredicted RBP18.65■□□□□ 0.58
PPM1N-201ENST00000396735 SMARCC1Q92922 1105 aaPredicted RBP18.65■□□□□ 0.58
PPM1N-201ENST00000396735 ARXQ96QS3 562 aa18.65■□□□□ 0.58
PPM1N-201ENST00000396735 NPC1L1Q9UHC9 1359 aa18.65■□□□□ 0.58
PPM1N-201ENST00000396735 LINC00116Q8NCU8 138 aa18.64■□□□□ 0.57
PPM1N-201ENST00000396735 SYT17Q9BSW7 474 aa18.64■□□□□ 0.57
PPM1N-201ENST00000396735 SCN11AQ9UI33 1791 aa18.63■□□□□ 0.57
PPM1N-201ENST00000396735 LOC102724428A0A0B4J2F2 783 aa18.63■□□□□ 0.57
PPM1N-201ENST00000396735 SIK1P57059 783 aa18.63■□□□□ 0.57
PPM1N-201ENST00000396735 MSL1Q68DK7 614 aa18.63■□□□□ 0.57
PPM1N-201ENST00000396735 SLC4A9Q96Q91 983 aa18.63■□□□□ 0.57
PPM1N-201ENST00000396735 VIRMAQ69YN4 1812 aaKnown RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms