RNA–Protein interactions for RNA: ENST00000396682.6

RPA3-202, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RPA3, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-202ENST00000396682 PRIM1P49642 420 aaKnown RBP18.64■□□□□ 0.57
RPA3-202ENST00000396682 KCNQ4P56696 695 aa18.64■□□□□ 0.57
RPA3-202ENST00000396682 SLC27A3Q5K4L6 730 aa18.64■□□□□ 0.57
RPA3-202ENST00000396682 GGNBP2Q9H3C7 697 aa18.64■□□□□ 0.57
RPA3-202ENST00000396682 TUBGCP6Q96RT7 1819 aa18.64■□□□□ 0.57
RPA3-202ENST00000396682 TMF1P82094 1093 aa18.63■□□□□ 0.57
RPA3-202ENST00000396682 NBPF6Q5VWK0 638 aa18.63■□□□□ 0.57
RPA3-202ENST00000396682 ZCRB1Q8TBF4 217 aaKnown RBP18.63■□□□□ 0.57
RPA3-202ENST00000396682 SYTL4Q96C24 671 aaPredicted RBP18.63■□□□□ 0.57
RPA3-202ENST00000396682 NBPF4Q96M43 638 aa18.63■□□□□ 0.57
RPA3-202ENST00000396682 ARXQ96QS3 562 aa18.63■□□□□ 0.57
RPA3-202ENST00000396682 COL24A1Q17RW2 1714 aa18.63■□□□□ 0.57
RPA3-202ENST00000396682 PNPLA7Q6ZV29 1317 aa18.62■□□□□ 0.57
RPA3-202ENST00000396682 MAP3K5Q99683 1374 aa18.62■□□□□ 0.57
RPA3-202ENST00000396682 KIF20BQ96Q89 1820 aa18.61■□□□□ 0.57
RPA3-202ENST00000396682 USHBP1Q8N6Y0 703 aa18.61■□□□□ 0.57
RPA3-202ENST00000396682 GOLGB1Q14789 3259 aaKnown RBP18.6■□□□□ 0.57
RPA3-202ENST00000396682 HSP90AB2PQ58FF8 381 aa18.59■□□□□ 0.57
RPA3-202ENST00000396682 SLC16A10Q8TF71 515 aa18.58■□□□□ 0.56
RPA3-202ENST00000396682 SMG6Q86US8 1419 aaKnown RBP18.57■□□□□ 0.56
RPA3-202ENST00000396682 INSRP06213 1382 aa18.57■□□□□ 0.56
RPA3-202ENST00000396682 CARD14Q9BXL6 1004 aa18.57■□□□□ 0.56
RPA3-202ENST00000396682 CGNL1Q0VF96 1302 aa18.56■□□□□ 0.56
RPA3-202ENST00000396682 TRIM26Q12899 539 aaPredicted RBP18.56■□□□□ 0.56
RPA3-202ENST00000396682 ZNF784Q8NCA9 323 aaPredicted RBP18.56■□□□□ 0.56
RPA3-202ENST00000396682 TFCP2L1Q9NZI6 479 aa18.56■□□□□ 0.56
RPA3-202ENST00000396682 CHD4Q14839 1912 aa18.56■□□□□ 0.56
RPA3-202ENST00000396682 FLT4P35916 1363 aa18.55■□□□□ 0.56
RPA3-202ENST00000396682 RAPGEF4Q8WZA2 1011 aa18.55■□□□□ 0.56
RPA3-202ENST00000396682 CCNL1Q9UK58 526 aaPredicted RBP18.55■□□□□ 0.56
RPA3-202ENST00000396682 KIF24Q5T7B8 1368 aa18.55■□□□□ 0.56
RPA3-202ENST00000396682 TATP17735 454 aaPredicted RBP18.53■□□□□ 0.56
RPA3-202ENST00000396682 CDCA8Q53HL2 280 aa18.53■□□□□ 0.56
RPA3-202ENST00000396682 NSD3Q9BZ95 1437 aa18.53■□□□□ 0.56
RPA3-202ENST00000396682 TOGARAM1Q9Y4F4 1720 aa18.53■□□□□ 0.56
RPA3-202ENST00000396682 POLD1P28340 1107 aa18.52■□□□□ 0.56
RPA3-202ENST00000396682 EMILIN1Q9Y6C2 1016 aa18.52■□□□□ 0.56
RPA3-202ENST00000396682 C5P01031 1676 aa18.52■□□□□ 0.56
RPA3-202ENST00000396682 ANKRD26Q9UPS8 1709 aa18.52■□□□□ 0.55
RPA3-202ENST00000396682 PCDH11XQ9BZA7 1347 aa18.51■□□□□ 0.55
RPA3-202ENST00000396682 PCDH11YQ9BZA8 1340 aa18.51■□□□□ 0.55
RPA3-202ENST00000396682 CYP27B1O15528 508 aa18.51■□□□□ 0.55
RPA3-202ENST00000396682 COL23A1Q86Y22 540 aaPredicted RBP18.51■□□□□ 0.55
RPA3-202ENST00000396682 PKD1L3Q7Z443 1732 aa18.51■□□□□ 0.55
RPA3-202ENST00000396682 NCAPD2Q15021 1401 aa18.5■□□□□ 0.55
RPA3-202ENST00000396682 KLHL34Q8N239 644 aa18.5■□□□□ 0.55
RPA3-202ENST00000396682 NLGN2Q8NFZ4 835 aa18.5■□□□□ 0.55
RPA3-202ENST00000396682 TAF1LQ8IZX4 1826 aa18.49■□□□□ 0.55
RPA3-202ENST00000396682 ITGB4P16144 1822 aa18.49■□□□□ 0.55
RPA3-202ENST00000396682 PALLDQ8WX93 1383 aa18.48■□□□□ 0.55
RPA3-202ENST00000396682 GPR162Q16538 588 aa18.48■□□□□ 0.55
RPA3-202ENST00000396682 MPRIPQ6WCQ1 1025 aa18.47■□□□□ 0.55
RPA3-202ENST00000396682 MAP2P11137 1827 aaKnown RBP18.45■□□□□ 0.54
RPA3-202ENST00000396682 MSH5O43196 834 aa18.45■□□□□ 0.54
RPA3-202ENST00000396682 MSL1Q68DK7 614 aa18.45■□□□□ 0.54
RPA3-202ENST00000396682 C4BP0C0L5 1744 aa18.44■□□□□ 0.54
RPA3-202ENST00000396682 PPM1GO15355 546 aaPredicted RBP18.44■□□□□ 0.54
RPA3-202ENST00000396682 AMIGO3Q86WK7 504 aa18.44■□□□□ 0.54
RPA3-202ENST00000396682 WASHC2AQ641Q2 1341 aa18.44■□□□□ 0.54
RPA3-202ENST00000396682 NKX1-1Q15270 411 aaPredicted RBP18.43■□□□□ 0.54
RPA3-202ENST00000396682 PELP1Q8IZL8 1130 aaKnown RBP18.43■□□□□ 0.54
RPA3-202ENST00000396682 TIMELESSQ9UNS1 1208 aa18.43■□□□□ 0.54
RPA3-202ENST00000396682 PIGBQ92521 554 aa18.42■□□□□ 0.54
RPA3-202ENST00000396682 EYA1Q99502 592 aa18.42■□□□□ 0.54
RPA3-202ENST00000396682 YBX3P16989 372 aaKnown RBP eCLIP18.41■□□□□ 0.542e-8■■□□□ 13.2
RPA3-202ENST00000396682 POLKQ9UBT6 870 aa18.41■□□□□ 0.54
RPA3-202ENST00000396682 UBR3Q6ZT12 1888 aa18.41■□□□□ 0.54
RPA3-202ENST00000396682 SMIM5Q71RC9 77 aa18.39■□□□□ 0.53
RPA3-202ENST00000396682 FLAD1Q8NFF5 587 aa18.39■□□□□ 0.53
RPA3-202ENST00000396682 SMARCC1Q92922 1105 aaPredicted RBP18.39■□□□□ 0.53
RPA3-202ENST00000396682 SPG7Q9UQ90 795 aa18.39■□□□□ 0.53
RPA3-202ENST00000396682 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.38■□□□□ 0.53
RPA3-202ENST00000396682 CLSPNQ9HAW4 1339 aa18.37■□□□□ 0.53
RPA3-202ENST00000396682 PHKG2P15735 406 aa18.36■□□□□ 0.53
RPA3-202ENST00000396682 HMGB2P26583 209 aaKnown RBP18.36■□□□□ 0.53
RPA3-202ENST00000396682 C1QTNF8P60827 252 aa18.36■□□□□ 0.53
RPA3-202ENST00000396682 EIF4A2Q14240 407 aaKnown RBP18.36■□□□□ 0.53
RPA3-202ENST00000396682 LINC00116Q8NCU8 138 aa18.36■□□□□ 0.53
RPA3-202ENST00000396682 AK7Q96M32 723 aa18.36■□□□□ 0.53
RPA3-202ENST00000396682 POLR3GLQ9BT43 218 aa18.36■□□□□ 0.53
RPA3-202ENST00000396682 LOC102724428A0A0B4J2F2 783 aa18.35■□□□□ 0.53
RPA3-202ENST00000396682 PHF14O94880 888 aa18.35■□□□□ 0.53
RPA3-202ENST00000396682 TNNT2P45379 298 aaPredicted RBP18.35■□□□□ 0.53
RPA3-202ENST00000396682 SIK1P57059 783 aa18.35■□□□□ 0.53
RPA3-202ENST00000396682 ITPK1Q13572 414 aa18.35■□□□□ 0.53
RPA3-202ENST00000396682 ASAP1Q9ULH1 1129 aa18.35■□□□□ 0.53
RPA3-202ENST00000396682 CD2APQ9Y5K6 639 aa18.35■□□□□ 0.53
RPA3-202ENST00000396682 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.34■□□□□ 0.53
RPA3-202ENST00000396682 GRIN3BO60391 1043 aa18.34■□□□□ 0.53
RPA3-202ENST00000396682 IFNL2Q8IZJ0 200 aa18.34■□□□□ 0.53
RPA3-202ENST00000396682 PCGF6Q9BYE7 350 aa18.34■□□□□ 0.53
RPA3-202ENST00000396682 TMOD3Q9NYL9 352 aa18.34■□□□□ 0.53
RPA3-202ENST00000396682 IGSF1Q8N6C5 1336 aa18.32■□□□□ 0.52
RPA3-202ENST00000396682 SSFA2P28290 1259 aa18.32■□□□□ 0.52
RPA3-202ENST00000396682 ATG3Q9NT62 314 aa18.32■□□□□ 0.52
RPA3-202ENST00000396682 PLEKHG2Q9H7P9 1386 aa18.31■□□□□ 0.52
RPA3-202ENST00000396682 KDRP35968 1356 aa18.3■□□□□ 0.52
RPA3-202ENST00000396682 SENP3-EIF4A1A0A087X0R7 540 aa18.3■□□□□ 0.52
RPA3-202ENST00000396682 HSPA5P11021 654 aaKnown RBP18.3■□□□□ 0.52
RPA3-202ENST00000396682 PANK3Q9H999 370 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 1087.3 ms