RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 CGNL1Q0VF96 1302 aa25.31■■□□□ 1.64
FXN-203ENST00000396366 PANK3Q9H999 370 aa25.3■■□□□ 1.64
FXN-203ENST00000396366 SMG6Q86US8 1419 aaKnown RBP25.29■■□□□ 1.64
FXN-203ENST00000396366 KIF24Q5T7B8 1368 aa25.28■■□□□ 1.64
FXN-203ENST00000396366 MAP2P11137 1827 aaKnown RBP25.28■■□□□ 1.64
FXN-203ENST00000396366 TNNT2P45379 298 aaPredicted RBP25.27■■□□□ 1.64
FXN-203ENST00000396366 PRIM1P49642 420 aaKnown RBP25.27■■□□□ 1.64
FXN-203ENST00000396366 RAPGEF4Q8WZA2 1011 aa25.26■■□□□ 1.63
FXN-203ENST00000396366 SYTL4Q96C24 671 aaPredicted RBP25.26■■□□□ 1.63
FXN-203ENST00000396366 STK32BQ9NY57 414 aa25.26■■□□□ 1.63
FXN-203ENST00000396366 SLC15A2Q16348 729 aa25.25■■□□□ 1.63
FXN-203ENST00000396366 SPON1Q9HCB6 807 aa25.25■■□□□ 1.63
FXN-203ENST00000396366 LRRC4BQ9NT99 713 aa25.25■■□□□ 1.63
FXN-203ENST00000396366 POLKQ9UBT6 870 aa25.25■■□□□ 1.63
FXN-203ENST00000396366 CASZ1Q86V15 1759 aa25.25■■□□□ 1.63
FXN-203ENST00000396366 DOT1LQ8TEK3 1739 aa25.24■■□□□ 1.63
FXN-203ENST00000396366 TATP17735 454 aaPredicted RBP25.24■■□□□ 1.63
FXN-203ENST00000396366 WASHC2AQ641Q2 1341 aa25.23■■□□□ 1.63
FXN-203ENST00000396366 ANKRD26Q9UPS8 1709 aa25.23■■□□□ 1.63
FXN-203ENST00000396366 ZBTB7AO95365 584 aa25.22■■□□□ 1.63
FXN-203ENST00000396366 NSD2O96028 1365 aa25.21■■□□□ 1.63
FXN-203ENST00000396366 KCNQ4P56696 695 aa25.21■■□□□ 1.63
FXN-203ENST00000396366 ZNF827Q17R98 1081 aa25.19■■□□□ 1.62
FXN-203ENST00000396366 PAPPAQ13219 1627 aa25.19■■□□□ 1.62
FXN-203ENST00000396366 EYA1Q99502 592 aa25.18■■□□□ 1.62
FXN-203ENST00000396366 ATF5Q9Y2D1 282 aaPredicted RBP25.18■■□□□ 1.62
FXN-203ENST00000396366 CYP27B1O15528 508 aa25.17■■□□□ 1.62
FXN-203ENST00000396366 PPP1R1BQ9UD71 204 aaPredicted RBP25.17■■□□□ 1.62
FXN-203ENST00000396366 PCDH11XQ9BZA7 1347 aa25.14■■□□□ 1.62
FXN-203ENST00000396366 PCDH11YQ9BZA8 1340 aa25.14■■□□□ 1.62
FXN-203ENST00000396366 NCAPD2Q15021 1401 aa25.14■■□□□ 1.62
FXN-203ENST00000396366 PTGER2P43116 358 aa25.14■■□□□ 1.62
FXN-203ENST00000396366 EIF4A2Q14240 407 aaKnown RBP25.14■■□□□ 1.62
FXN-203ENST00000396366 KIF7Q2M1P5 1343 aa25.13■■□□□ 1.61
FXN-203ENST00000396366 SLC27A3Q5K4L6 730 aa25.13■■□□□ 1.61
FXN-203ENST00000396366 AKT1S1Q96B36 256 aa25.13■■□□□ 1.61
FXN-203ENST00000396366 LY75O60449 1722 aa25.12■■□□□ 1.61
FXN-203ENST00000396366 MORC1Q86VD1 984 aa25.11■■□□□ 1.61
FXN-203ENST00000396366 PKD1L3Q7Z443 1732 aa25.11■■□□□ 1.61
FXN-203ENST00000396366 KNSTRNQ9Y448 316 aa25.1■■□□□ 1.61
FXN-203ENST00000396366 MPRIPQ6WCQ1 1025 aa25.09■■□□□ 1.61
FXN-203ENST00000396366 TOGARAM1Q9Y4F4 1720 aa25.09■■□□□ 1.61
FXN-203ENST00000396366 MTFR1LQ9H019 292 aa25.08■■□□□ 1.61
FXN-203ENST00000396366 CCNL1Q9UK58 526 aaPredicted RBP25.08■■□□□ 1.61
FXN-203ENST00000396366 SPG7Q9UQ90 795 aa25.08■■□□□ 1.61
FXN-203ENST00000396366 SGIP1Q9BQI5 828 aa25.06■■□□□ 1.6
FXN-203ENST00000396366 ITGB4P16144 1822 aa25.06■■□□□ 1.6
FXN-203ENST00000396366 NKX1-1Q15270 411 aaPredicted RBP25.05■■□□□ 1.6
FXN-203ENST00000396366 AMER1Q5JTC6 1135 aaPredicted RBP25.05■■□□□ 1.6
FXN-203ENST00000396366 PNPLA7Q6ZV29 1317 aa25.05■■□□□ 1.6
FXN-203ENST00000396366 TFCP2L1Q9NZI6 479 aa25.04■■□□□ 1.6
FXN-203ENST00000396366 TUBGCP6Q96RT7 1819 aa25.04■■□□□ 1.6
FXN-203ENST00000396366 PIGBQ92521 554 aa25.03■■□□□ 1.6
FXN-203ENST00000396366 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.03■■□□□ 1.6
FXN-203ENST00000396366 IGSF1Q8N6C5 1336 aa25.03■■□□□ 1.6
FXN-203ENST00000396366 PHKG2P15735 406 aa25.01■■□□□ 1.59
FXN-203ENST00000396366 PALLDQ8WX93 1383 aa25.01■■□□□ 1.59
FXN-203ENST00000396366 PER1O15534 1290 aaPredicted RBP25■■□□□ 1.59
FXN-203ENST00000396366 QSER1Q2KHR3 1735 aa25■■□□□ 1.59
FXN-203ENST00000396366 AEBP1Q8IUX7 1158 aa24.99■■□□□ 1.59
FXN-203ENST00000396366 IFNL2Q8IZJ0 200 aa24.99■■□□□ 1.59
FXN-203ENST00000396366 FHDC1Q9C0D6 1143 aaPredicted RBP24.99■■□□□ 1.59
FXN-203ENST00000396366 CC2D1BQ5T0F9 858 aaKnown RBP24.96■■□□□ 1.59
FXN-203ENST00000396366 ARXQ96QS3 562 aa24.96■■□□□ 1.59
FXN-203ENST00000396366 SYT17Q9BSW7 474 aa24.96■■□□□ 1.59
FXN-203ENST00000396366 C5P01031 1676 aa24.96■■□□□ 1.59
FXN-203ENST00000396366 IL13P35225 146 aa24.95■■□□□ 1.58
FXN-203ENST00000396366 COL23A1Q86Y22 540 aaPredicted RBP24.95■■□□□ 1.58
FXN-203ENST00000396366 SLC16A10Q8TF71 515 aa24.95■■□□□ 1.58
FXN-203ENST00000396366 TAF1LQ8IZX4 1826 aa24.95■■□□□ 1.58
FXN-203ENST00000396366 CNGB1Q14028 1251 aaPredicted RBP24.94■■□□□ 1.58
FXN-203ENST00000396366 SMARCC1Q92922 1105 aaPredicted RBP24.94■■□□□ 1.58
FXN-203ENST00000396366 TMOD3Q9NYL9 352 aa24.94■■□□□ 1.58
FXN-203ENST00000396366 ASAP1Q9ULH1 1129 aa24.94■■□□□ 1.58
FXN-203ENST00000396366 MSH5O43196 834 aa24.93■■□□□ 1.58
FXN-203ENST00000396366 MTHFSP49914 203 aa24.93■■□□□ 1.58
FXN-203ENST00000396366 SULT6B1Q6IMI4 303 aa24.93■■□□□ 1.58
FXN-203ENST00000396366 PLEKHO1Q53GL0 409 aaPredicted RBP24.92■■□□□ 1.58
FXN-203ENST00000396366 SMIM5Q71RC9 77 aa24.91■■□□□ 1.58
FXN-203ENST00000396366 COL24A1Q17RW2 1714 aa24.9■■□□□ 1.58
FXN-203ENST00000396366 ZNF530Q6P9A1 599 aaPredicted RBP24.9■■□□□ 1.58
FXN-203ENST00000396366 AMIGO3Q86WK7 504 aa24.9■■□□□ 1.58
FXN-203ENST00000396366 ATG3Q9NT62 314 aa24.9■■□□□ 1.58
FXN-203ENST00000396366 LOC102724428A0A0B4J2F2 783 aa24.88■■□□□ 1.57
FXN-203ENST00000396366 DCAF8L1A6NGE4 600 aa24.88■■□□□ 1.57
FXN-203ENST00000396366 POLD1P28340 1107 aa24.88■■□□□ 1.57
FXN-203ENST00000396366 SIK1P57059 783 aa24.88■■□□□ 1.57
FXN-203ENST00000396366 C4BP0C0L5 1744 aa24.88■■□□□ 1.57
FXN-203ENST00000396366 PLEKHG2Q9H7P9 1386 aa24.88■■□□□ 1.57
FXN-203ENST00000396366 ITPK1Q13572 414 aa24.87■■□□□ 1.57
FXN-203ENST00000396366 AMOTQ4VCS5 1084 aa24.87■■□□□ 1.57
FXN-203ENST00000396366 MSL1Q68DK7 614 aa24.87■■□□□ 1.57
FXN-203ENST00000396366 LINC00116Q8NCU8 138 aa24.87■■□□□ 1.57
FXN-203ENST00000396366 KDM6AO15550 1401 aaPredicted RBP24.86■■□□□ 1.57
FXN-203ENST00000396366 KLHL34Q8N239 644 aa24.86■■□□□ 1.57
FXN-203ENST00000396366 DCAF5Q96JK2 942 aa24.86■■□□□ 1.57
FXN-203ENST00000396366 KDRP35968 1356 aa24.85■■□□□ 1.57
FXN-203ENST00000396366 ERVV-2B6SEH9 535 aa24.85■■□□□ 1.57
FXN-203ENST00000396366 AK7Q96M32 723 aa24.85■■□□□ 1.57
FXN-203ENST00000396366 HSP90AB1P08238 724 aaKnown RBP24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms