RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 USP21Q9UK80 565 aa10.29□□□□□ -0.76
NDE1-202ENST00000396355 U2AF2P26368 475 aaKnown RBP eCLIP10.29□□□□□ -0.76
NDE1-202ENST00000396355 SAFB2Q14151 953 aaKnown RBP eCLIP10.29□□□□□ -0.76
NDE1-202ENST00000396355 CLGNO14967 610 aa10.29□□□□□ -0.76
NDE1-202ENST00000396355 HMGN5P82970 282 aaKnown RBP10.29□□□□□ -0.76
NDE1-202ENST00000396355 LRRC7Q96NW7 1537 aa10.29□□□□□ -0.76
NDE1-202ENST00000396355 RIPK4P57078 832 aa10.28□□□□□ -0.76
NDE1-202ENST00000396355 OS9Q13438 667 aaPredicted RBP10.28□□□□□ -0.76
NDE1-202ENST00000396355 JARID2Q92833 1246 aaPredicted RBP10.28□□□□□ -0.76
NDE1-202ENST00000396355 SBNO2Q9Y2G9 1366 aa10.28□□□□□ -0.76
NDE1-202ENST00000396355 RBM6P78332 1123 aaKnown RBP10.28□□□□□ -0.76
NDE1-202ENST00000396355 NOL8Q76FK4 1167 aaKnown RBP10.28□□□□□ -0.76
NDE1-202ENST00000396355 BCAR3O75815 825 aa10.27□□□□□ -0.76
NDE1-202ENST00000396355 CCDC39Q9UFE4 941 aa10.27□□□□□ -0.76
NDE1-202ENST00000396355 SPATA31A6Q5VVP1 1343 aa10.27□□□□□ -0.76
NDE1-202ENST00000396355 NKTRP30414 1462 aaKnown RBP10.27□□□□□ -0.76
NDE1-202ENST00000396355 TEX2Q8IWB9 1127 aa10.27□□□□□ -0.77
NDE1-202ENST00000396355 UPF1Q92900 1129 aaKnown RBP eCLIP10.27□□□□□ -0.774e-8■■■■■ 37.6
NDE1-202ENST00000396355 CALCOCO1Q9P1Z2 691 aa10.27□□□□□ -0.77
NDE1-202ENST00000396355 DCAF8L1A6NGE4 600 aa10.27□□□□□ -0.77
NDE1-202ENST00000396355 FAM135BQ49AJ0 1406 aa10.26□□□□□ -0.77
NDE1-202ENST00000396355 RIMS2Q9UQ26 1411 aa10.26□□□□□ -0.77
NDE1-202ENST00000396355 FOXO3O43524 673 aa10.26□□□□□ -0.77
NDE1-202ENST00000396355 NSD3Q9BZ95 1437 aa10.26□□□□□ -0.77
NDE1-202ENST00000396355 C10orf67Q8IYJ2 551 aa10.26□□□□□ -0.77
NDE1-202ENST00000396355 DEF6Q9H4E7 631 aa10.26□□□□□ -0.77
NDE1-202ENST00000396355 TRAK1Q9UPV9 953 aa10.26□□□□□ -0.77
NDE1-202ENST00000396355 VGFO15240 615 aaPredicted RBP10.26□□□□□ -0.77
NDE1-202ENST00000396355 TTLL5Q6EMB2 1281 aa10.26□□□□□ -0.77
NDE1-202ENST00000396355 TMEM132EQ6IEE7 984 aa10.26□□□□□ -0.77
NDE1-202ENST00000396355 DIAPH3Q9NSV4 1193 aa10.26□□□□□ -0.77
NDE1-202ENST00000396355 ARHGEF28Q8N1W1 1705 aaKnown RBP10.25□□□□□ -0.77
NDE1-202ENST00000396355 ZBTB12Q9Y330 459 aaPredicted RBP10.25□□□□□ -0.77
NDE1-202ENST00000396355 ABCC3O15438 1527 aa10.25□□□□□ -0.77
NDE1-202ENST00000396355 CENPJQ9HC77 1338 aaPredicted RBP10.25□□□□□ -0.77
NDE1-202ENST00000396355 HSP90AB3PQ58FF7 597 aa10.25□□□□□ -0.77
NDE1-202ENST00000396355 SPC24Q8NBT2 197 aa10.25□□□□□ -0.77
NDE1-202ENST00000396355 SLC12A5Q9H2X9 1139 aa10.25□□□□□ -0.77
NDE1-202ENST00000396355 IFT57Q9NWB7 429 aa10.25□□□□□ -0.77
NDE1-202ENST00000396355 BRINP3Q76B58 766 aa10.25□□□□□ -0.77
NDE1-202ENST00000396355 PIK3C2BO00750 1634 aa10.24□□□□□ -0.77
NDE1-202ENST00000396355 LOC102724159A0A0B4J2E5 919 aa10.24□□□□□ -0.77
NDE1-202ENST00000396355 POLR3GO15318 223 aaPredicted RBP10.24□□□□□ -0.77
NDE1-202ENST00000396355 PWP2Q15269 919 aaKnown RBP10.24□□□□□ -0.77
NDE1-202ENST00000396355 TRPC5Q9UL62 973 aaPredicted RBP10.24□□□□□ -0.77
NDE1-202ENST00000396355 POLR3AO14802 1390 aaPredicted RBP10.24□□□□□ -0.77
NDE1-202ENST00000396355 C8orf34Q49A92 452 aa10.24□□□□□ -0.77
NDE1-202ENST00000396355 TBC1D2Q9BYX2 928 aa10.24□□□□□ -0.77
NDE1-202ENST00000396355 TULP4Q9NRJ4 1543 aa10.24□□□□□ -0.77
NDE1-202ENST00000396355 TEX35Q5T0J7 233 aa10.24□□□□□ -0.77
NDE1-202ENST00000396355 USP32Q8NFA0 1604 aa10.23□□□□□ -0.77
NDE1-202ENST00000396355 VIRMAQ69YN4 1812 aaKnown RBP10.23□□□□□ -0.77
NDE1-202ENST00000396355 PRPF40AO75400 957 aaKnown RBP10.23□□□□□ -0.77
NDE1-202ENST00000396355 HOMEZQ8IX15 550 aa10.23□□□□□ -0.77
NDE1-202ENST00000396355 C22orf23Q9BZE7 217 aa10.23□□□□□ -0.77
NDE1-202ENST00000396355 RSPH14Q9UHP6 348 aa10.23□□□□□ -0.77
NDE1-202ENST00000396355 COG6Q9Y2V7 657 aa10.23□□□□□ -0.77
NDE1-202ENST00000396355 C14orf93Q9H972 538 aaKnown RBP10.23□□□□□ -0.77
NDE1-202ENST00000396355 NEXMIFQ5QGS0 1516 aa10.23□□□□□ -0.77
NDE1-202ENST00000396355 MYO5BQ9ULV0 1848 aa10.22□□□□□ -0.77
NDE1-202ENST00000396355 CCAR2Q8N163 923 aaKnown RBP10.22□□□□□ -0.77
NDE1-202ENST00000396355 CALRP27797 417 aaKnown RBP10.22□□□□□ -0.77
NDE1-202ENST00000396355 UTP14CQ5TAP6 766 aaKnown RBP10.22□□□□□ -0.77
NDE1-202ENST00000396355 DRC1Q96MC2 740 aa10.22□□□□□ -0.77
NDE1-202ENST00000396355 PSME1Q06323 249 aa10.22□□□□□ -0.77
NDE1-202ENST00000396355 EP400NLQ6ZTU2 488 aa10.22□□□□□ -0.77
NDE1-202ENST00000396355 ORAI2Q96SN7 254 aa10.22□□□□□ -0.77
NDE1-202ENST00000396355 C17orf53Q8N3J3 647 aaPredicted RBP10.21□□□□□ -0.77
NDE1-202ENST00000396355 TDO2P48775 406 aa10.21□□□□□ -0.78
NDE1-202ENST00000396355 IRX5P78411 483 aaPredicted RBP10.21□□□□□ -0.78
NDE1-202ENST00000396355 NGEFQ8N5V2 710 aa10.21□□□□□ -0.78
NDE1-202ENST00000396355 RRP7AQ9Y3A4 280 aaKnown RBP10.21□□□□□ -0.78
NDE1-202ENST00000396355 IGHDP01880 384 aa10.2□□□□□ -0.78
NDE1-202ENST00000396355 RTF1Q92541 710 aaKnown RBP10.2□□□□□ -0.78
NDE1-202ENST00000396355 BCL2L13Q9BXK5 485 aa10.2□□□□□ -0.78
NDE1-202ENST00000396355 GPS2Q13227 327 aa10.2□□□□□ -0.78
NDE1-202ENST00000396355 GNL2Q13823 731 aaKnown RBP10.2□□□□□ -0.78
NDE1-202ENST00000396355 CHMP3Q9Y3E7 222 aa10.2□□□□□ -0.78
NDE1-202ENST00000396355 HTATSF1O43719 755 aaKnown RBP10.2□□□□□ -0.78
NDE1-202ENST00000396355 NOM1Q5C9Z4 860 aaKnown RBP10.2□□□□□ -0.78
NDE1-202ENST00000396355 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.2□□□□□ -0.78
NDE1-202ENST00000396355 V9GYY5 206 aaPredicted RBP10.2□□□□□ -0.78
NDE1-202ENST00000396355 ZSCAN20P17040 1043 aaPredicted RBP10.19□□□□□ -0.78
NDE1-202ENST00000396355 SAMD1Q6SPF0 538 aaPredicted RBP10.19□□□□□ -0.78
NDE1-202ENST00000396355 TNNQ9UQP3 1299 aa10.19□□□□□ -0.78
NDE1-202ENST00000396355 SYCE3A1L190 88 aa10.19□□□□□ -0.78
NDE1-202ENST00000396355 PANK1Q8TE04 598 aa10.19□□□□□ -0.78
NDE1-202ENST00000396355 GORABQ5T7V8 394 aa10.18□□□□□ -0.78
NDE1-202ENST00000396355 GAS2L3Q86XJ1 694 aa10.18□□□□□ -0.78
NDE1-202ENST00000396355 MED14O60244 1454 aa10.18□□□□□ -0.78
NDE1-202ENST00000396355 GOLIM4O00461 696 aa10.18□□□□□ -0.78
NDE1-202ENST00000396355 RGS22Q8NE09 1264 aa10.18□□□□□ -0.78
NDE1-202ENST00000396355 ISY1Q9ULR0 285 aaKnown RBP10.18□□□□□ -0.78
NDE1-202ENST00000396355 SEC24BO95487 1268 aa10.18□□□□□ -0.78
NDE1-202ENST00000396355 MORC1Q86VD1 984 aa10.18□□□□□ -0.78
NDE1-202ENST00000396355 TSPYL1Q9H0U9 437 aa10.18□□□□□ -0.78
NDE1-202ENST00000396355 MTHFSP49914 203 aa10.17□□□□□ -0.78
NDE1-202ENST00000396355 TNPO1Q92973 898 aaKnown RBP10.17□□□□□ -0.78
NDE1-202ENST00000396355 TTC12Q9H892 705 aaPredicted RBP10.17□□□□□ -0.78
NDE1-202ENST00000396355 PPP1R1BQ9UD71 204 aaPredicted RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms