RNA–Protein interactions for RNA: ENST00000395549.3

ATG13-202, Transcript of autophagy related 13, humanhuman

TSL 5

Gene ATG13, Length 937 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-202ENST00000395549 DDX54Q8TDD1 881 aaKnown RBP22.6■■□□□ 1.21
ATG13-202ENST00000395549 KIF7Q2M1P5 1343 aa22.59■■□□□ 1.21
ATG13-202ENST00000395549 TNNT2P45379 298 aaPredicted RBP22.59■■□□□ 1.21
ATG13-202ENST00000395549 NBPF14Q5TI25 921 aa22.59■■□□□ 1.21
ATG13-202ENST00000395549 NSD2O96028 1365 aa22.58■■□□□ 1.21
ATG13-202ENST00000395549 ZCRB1Q8TBF4 217 aaKnown RBP22.57■■□□□ 1.2
ATG13-202ENST00000395549 RAPGEF4Q8WZA2 1011 aa22.57■■□□□ 1.2
ATG13-202ENST00000395549 POLKQ9UBT6 870 aa22.57■■□□□ 1.2
ATG13-202ENST00000395549 WASHC2AQ641Q2 1341 aa22.56■■□□□ 1.2
ATG13-202ENST00000395549 PKD1L3Q7Z443 1732 aa22.55■■□□□ 1.2
ATG13-202ENST00000395549 TATP17735 454 aaPredicted RBP22.55■■□□□ 1.2
ATG13-202ENST00000395549 PROM2Q8N271 834 aa22.53■■□□□ 1.2
ATG13-202ENST00000395549 KNSTRNQ9Y448 316 aa22.53■■□□□ 1.2
ATG13-202ENST00000395549 NCAPD2Q15021 1401 aa22.53■■□□□ 1.2
ATG13-202ENST00000395549 TXNRD1Q16881 649 aa22.52■■□□□ 1.2
ATG13-202ENST00000395549 MORC1Q86VD1 984 aa22.51■■□□□ 1.19
ATG13-202ENST00000395549 ANO8Q9HCE9 1232 aaPredicted RBP22.51■■□□□ 1.19
ATG13-202ENST00000395549 CASZ1Q86V15 1759 aa22.48■■□□□ 1.19
ATG13-202ENST00000395549 SYTL4Q96C24 671 aaPredicted RBP22.48■■□□□ 1.19
ATG13-202ENST00000395549 EYA1Q99502 592 aa22.48■■□□□ 1.19
ATG13-202ENST00000395549 PAPPAQ13219 1627 aa22.48■■□□□ 1.19
ATG13-202ENST00000395549 PCDH11XQ9BZA7 1347 aa22.48■■□□□ 1.19
ATG13-202ENST00000395549 PCDH11YQ9BZA8 1340 aa22.48■■□□□ 1.19
ATG13-202ENST00000395549 PRIM1P49642 420 aaKnown RBP22.47■■□□□ 1.19
ATG13-202ENST00000395549 EIF4A2Q14240 407 aaKnown RBP22.47■■□□□ 1.19
ATG13-202ENST00000395549 LY75O60449 1722 aa22.47■■□□□ 1.19
ATG13-202ENST00000395549 TOGARAM1Q9Y4F4 1720 aa22.47■■□□□ 1.19
ATG13-202ENST00000395549 ITGB4P16144 1822 aa22.47■■□□□ 1.19
ATG13-202ENST00000395549 AMER1Q5JTC6 1135 aaPredicted RBP22.46■■□□□ 1.19
ATG13-202ENST00000395549 STK32BQ9NY57 414 aa22.44■■□□□ 1.18
ATG13-202ENST00000395549 CYP27B1O15528 508 aa22.42■■□□□ 1.18
ATG13-202ENST00000395549 SPG7Q9UQ90 795 aa22.41■■□□□ 1.18
ATG13-202ENST00000395549 IGSF1Q8N6C5 1336 aa22.4■■□□□ 1.18
ATG13-202ENST00000395549 PER1O15534 1290 aaPredicted RBP22.4■■□□□ 1.18
ATG13-202ENST00000395549 SLC15A2Q16348 729 aa22.4■■□□□ 1.18
ATG13-202ENST00000395549 TUBGCP6Q96RT7 1819 aa22.39■■□□□ 1.17
ATG13-202ENST00000395549 LRRC4BQ9NT99 713 aa22.39■■□□□ 1.17
ATG13-202ENST00000395549 QSER1Q2KHR3 1735 aa22.38■■□□□ 1.17
ATG13-202ENST00000395549 CC2D1BQ5T0F9 858 aaKnown RBP22.38■■□□□ 1.17
ATG13-202ENST00000395549 SLC27A3Q5K4L6 730 aa22.37■■□□□ 1.17
ATG13-202ENST00000395549 PDGFDQ9GZP0 370 aaPredicted RBP22.37■■□□□ 1.17
ATG13-202ENST00000395549 SPON1Q9HCB6 807 aa22.37■■□□□ 1.17
ATG13-202ENST00000395549 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.37■■□□□ 1.17
ATG13-202ENST00000395549 PLEKHG2Q9H7P9 1386 aa22.35■■□□□ 1.17
ATG13-202ENST00000395549 TAF1LQ8IZX4 1826 aa22.34■■□□□ 1.17
ATG13-202ENST00000395549 C5P01031 1676 aa22.34■■□□□ 1.17
ATG13-202ENST00000395549 KCNQ4P56696 695 aa22.34■■□□□ 1.17
ATG13-202ENST00000395549 CNGB1Q14028 1251 aaPredicted RBP22.34■■□□□ 1.17
ATG13-202ENST00000395549 ZNF827Q17R98 1081 aa22.34■■□□□ 1.17
ATG13-202ENST00000395549 MPRIPQ6WCQ1 1025 aa22.34■■□□□ 1.17
ATG13-202ENST00000395549 NKX1-1Q15270 411 aaPredicted RBP22.33■■□□□ 1.17
ATG13-202ENST00000395549 NPC1L1Q9UHC9 1359 aa22.33■■□□□ 1.17
ATG13-202ENST00000395549 ZBTB7AO95365 584 aa22.32■■□□□ 1.16
ATG13-202ENST00000395549 PHKG2P15735 406 aa22.32■■□□□ 1.16
ATG13-202ENST00000395549 MTHFSP49914 203 aa22.32■■□□□ 1.16
ATG13-202ENST00000395549 IFNL2Q8IZJ0 200 aa22.32■■□□□ 1.16
ATG13-202ENST00000395549 CCNL1Q9UK58 526 aaPredicted RBP22.32■■□□□ 1.16
ATG13-202ENST00000395549 IL13P35225 146 aa22.31■■□□□ 1.16
ATG13-202ENST00000395549 AEBP1Q8IUX7 1158 aa22.31■■□□□ 1.16
ATG13-202ENST00000395549 PALLDQ8WX93 1383 aa22.3■■□□□ 1.16
ATG13-202ENST00000395549 AKT1S1Q96B36 256 aa22.3■■□□□ 1.16
ATG13-202ENST00000395549 PPP1R1BQ9UD71 204 aaPredicted RBP22.3■■□□□ 1.16
ATG13-202ENST00000395549 SULT6B1Q6IMI4 303 aa22.29■■□□□ 1.16
ATG13-202ENST00000395549 PLEKHO1Q53GL0 409 aaPredicted RBP22.28■■□□□ 1.16
ATG13-202ENST00000395549 ATF5Q9Y2D1 282 aaPredicted RBP22.28■■□□□ 1.16
ATG13-202ENST00000395549 KDRP35968 1356 aa22.27■■□□□ 1.16
ATG13-202ENST00000395549 PIGBQ92521 554 aa22.27■■□□□ 1.16
ATG13-202ENST00000395549 VIRMAQ69YN4 1812 aaKnown RBP22.27■■□□□ 1.15
ATG13-202ENST00000395549 ZNF530Q6P9A1 599 aaPredicted RBP22.26■■□□□ 1.15
ATG13-202ENST00000395549 TMOD3Q9NYL9 352 aa22.26■■□□□ 1.15
ATG13-202ENST00000395549 AMOTQ4VCS5 1084 aa22.25■■□□□ 1.15
ATG13-202ENST00000395549 SMARCC1Q92922 1105 aaPredicted RBP22.25■■□□□ 1.15
ATG13-202ENST00000395549 MTFR1LQ9H019 292 aa22.25■■□□□ 1.15
ATG13-202ENST00000395549 TFCP2L1Q9NZI6 479 aa22.25■■□□□ 1.15
ATG13-202ENST00000395549 SCN11AQ9UI33 1791 aa22.24■■□□□ 1.15
ATG13-202ENST00000395549 PNPLA7Q6ZV29 1317 aa22.24■■□□□ 1.15
ATG13-202ENST00000395549 C4BP0C0L5 1744 aa22.23■■□□□ 1.15
ATG13-202ENST00000395549 COL3A1P02461 1466 aaPredicted RBP22.23■■□□□ 1.15
ATG13-202ENST00000395549 HSP90AB1P08238 724 aaKnown RBP22.23■■□□□ 1.15
ATG13-202ENST00000395549 PTGER2P43116 358 aa22.23■■□□□ 1.15
ATG13-202ENST00000395549 COL24A1Q17RW2 1714 aa22.23■■□□□ 1.15
ATG13-202ENST00000395549 KDM6AO15550 1401 aaPredicted RBP22.23■■□□□ 1.15
ATG13-202ENST00000395549 DIAPH1O60610 1272 aaKnown RBP22.22■■□□□ 1.15
ATG13-202ENST00000395549 HMOX1P09601 288 aa22.21■■□□□ 1.15
ATG13-202ENST00000395549 C1orf141Q5JVX7 400 aa22.21■■□□□ 1.15
ATG13-202ENST00000395549 DCAF5Q96JK2 942 aa22.21■■□□□ 1.15
ATG13-202ENST00000395549 UBR3Q6ZT12 1888 aa22.2■■□□□ 1.14
ATG13-202ENST00000395549 ASAP1Q9ULH1 1129 aa22.2■■□□□ 1.14
ATG13-202ENST00000395549 ERVV-2B6SEH9 535 aa22.19■■□□□ 1.14
ATG13-202ENST00000395549 SGIP1Q9BQI5 828 aa22.18■■□□□ 1.14
ATG13-202ENST00000395549 LOC102724428A0A0B4J2F2 783 aa22.17■■□□□ 1.14
ATG13-202ENST00000395549 HMGB2P26583 209 aaKnown RBP22.17■■□□□ 1.14
ATG13-202ENST00000395549 SIK1P57059 783 aa22.17■■□□□ 1.14
ATG13-202ENST00000395549 SLC16A10Q8TF71 515 aa22.17■■□□□ 1.14
ATG13-202ENST00000395549 ATG3Q9NT62 314 aa22.17■■□□□ 1.14
ATG13-202ENST00000395549 ZNF831Q5JPB2 1677 aa22.16■■□□□ 1.14
ATG13-202ENST00000395549 MSH5O43196 834 aa22.15■■□□□ 1.14
ATG13-202ENST00000395549 CABP4P57796 275 aa22.15■■□□□ 1.14
ATG13-202ENST00000395549 U2SURPO15042 1029 aaKnown RBP22.14■■□□□ 1.13
ATG13-202ENST00000395549 COL23A1Q86Y22 540 aaPredicted RBP22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms