RNA–Protein interactions for RNA: ENST00000395495.5

A1CF-207, Transcript of APOBEC1 complementation factor, humanhuman

TSL 5 BASIC

Gene A1CF, Length 9,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-207ENST00000395495 ASXL2Q76L83 1435 aa6.14□□□□□ -1.43
A1CF-207ENST00000395495 CCDC66A2RUB6 948 aa6.14□□□□□ -1.43
A1CF-207ENST00000395495 KCNQ2O43526 872 aa6.14□□□□□ -1.43
A1CF-207ENST00000395495 INTS3Q68E01 1043 aaKnown RBP6.14□□□□□ -1.43
A1CF-207ENST00000395495 SETD5Q9C0A6 1442 aa6.14□□□□□ -1.43
A1CF-207ENST00000395495 SSBP05455 408 aaKnown RBP eCLIP6.13□□□□□ -1.43
A1CF-207ENST00000395495 NUCB2P80303 420 aa6.13□□□□□ -1.43
A1CF-207ENST00000395495 XPCQ01831 940 aaPredicted RBP6.13□□□□□ -1.43
A1CF-207ENST00000395495 FSD1Q9BTV5 496 aa6.13□□□□□ -1.43
A1CF-207ENST00000395495 DENND4BO75064 1496 aaPredicted RBP6.13□□□□□ -1.43
A1CF-207ENST00000395495 PSMD1Q99460 953 aa6.13□□□□□ -1.43
A1CF-207ENST00000395495 ABCC10Q5T3U5 1492 aa6.13□□□□□ -1.43
A1CF-207ENST00000395495 MLLT1Q03111 559 aaPredicted RBP6.13□□□□□ -1.43
A1CF-207ENST00000395495 BMS1Q14692 1282 aaKnown RBP6.13□□□□□ -1.43
A1CF-207ENST00000395495 FAM13BQ9NYF5 915 aa6.13□□□□□ -1.43
A1CF-207ENST00000395495 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.13□□□□□ -1.43
A1CF-207ENST00000395495 CDKL5O76039 1030 aa6.13□□□□□ -1.43
A1CF-207ENST00000395495 MPHOSPH8Q99549 860 aa6.13□□□□□ -1.43
A1CF-207ENST00000395495 ATP2B1P20020 1258 aa6.13□□□□□ -1.43
A1CF-207ENST00000395495 FAM98CQ17RN3 349 aaKnown RBP6.13□□□□□ -1.43
A1CF-207ENST00000395495 CNTROBQ8N137 903 aa6.13□□□□□ -1.43
A1CF-207ENST00000395495 CCDC69A6NI79 296 aa6.13□□□□□ -1.43
A1CF-207ENST00000395495 KIF20AO95235 890 aa6.13□□□□□ -1.43
A1CF-207ENST00000395495 STK38Q15208 465 aa6.13□□□□□ -1.43
A1CF-207ENST00000395495 FOXD4L6Q3SYB3 417 aaPredicted RBP6.13□□□□□ -1.43
A1CF-207ENST00000395495 FOXD4L3Q6VB84 417 aaPredicted RBP6.13□□□□□ -1.43
A1CF-207ENST00000395495 DDX19BQ9UMR2 479 aa6.13□□□□□ -1.43
A1CF-207ENST00000395495 SCAPERQ9BY12 1400 aa6.13□□□□□ -1.43
A1CF-207ENST00000395495 FOSBP53539 338 aa6.13□□□□□ -1.43
A1CF-207ENST00000395495 SMC1AQ14683 1233 aaKnown RBP6.13□□□□□ -1.43
A1CF-207ENST00000395495 CRACR2BQ8N4Y2 399 aaPredicted RBP6.13□□□□□ -1.43
A1CF-207ENST00000395495 DDX12PQ92771 950 aa6.13□□□□□ -1.43
A1CF-207ENST00000395495 NUP155O75694 1391 aa6.13□□□□□ -1.43
A1CF-207ENST00000395495 VTI1AQ96AJ9 217 aa6.12□□□□□ -1.43
A1CF-207ENST00000395495 SPATA32Q96LK8 384 aa6.12□□□□□ -1.43
A1CF-207ENST00000395495 TRIM37O94972 964 aa6.12□□□□□ -1.43
A1CF-207ENST00000395495 DEKP35659 375 aaKnown RBP6.12□□□□□ -1.43
A1CF-207ENST00000395495 BRPF1P55201 1214 aaPredicted RBP6.12□□□□□ -1.43
A1CF-207ENST00000395495 CCDC14Q49A88 953 aa6.12□□□□□ -1.43
A1CF-207ENST00000395495 DNAJC2Q99543 621 aaKnown RBP6.12□□□□□ -1.43
A1CF-207ENST00000395495 SPATA31D1Q6ZQQ2 1576 aa6.12□□□□□ -1.43
A1CF-207ENST00000395495 FAM177BA6PVY3 158 aa6.12□□□□□ -1.43
A1CF-207ENST00000395495 CCER2I3L3R5 266 aa6.12□□□□□ -1.43
A1CF-207ENST00000395495 TAF12Q16514 161 aa6.12□□□□□ -1.43
A1CF-207ENST00000395495 SLF2Q8IX21 1173 aa6.12□□□□□ -1.43
A1CF-207ENST00000395495 SEPT12Q8IYM1 358 aa6.12□□□□□ -1.43
A1CF-207ENST00000395495 CCDC89Q8N998 374 aa6.12□□□□□ -1.43
A1CF-207ENST00000395495 TTC21AQ8NDW8 1320 aa6.12□□□□□ -1.43
A1CF-207ENST00000395495 B4DLN1 442 aa6.12□□□□□ -1.43
A1CF-207ENST00000395495 CBFA2T2O43439 604 aa6.12□□□□□ -1.43
A1CF-207ENST00000395495 CTNNA2P26232 953 aa6.12□□□□□ -1.43
A1CF-207ENST00000395495 MRPL12P52815 198 aaKnown RBP6.12□□□□□ -1.43
A1CF-207ENST00000395495 UTP14AQ9BVJ6 771 aaKnown RBP6.12□□□□□ -1.43
A1CF-207ENST00000395495 CETN1Q12798 172 aa6.12□□□□□ -1.43
A1CF-207ENST00000395495 PLEKHO1Q53GL0 409 aaPredicted RBP6.12□□□□□ -1.43
A1CF-207ENST00000395495 BCL2L13Q9BXK5 485 aa6.12□□□□□ -1.43
A1CF-207ENST00000395495 TSPYL4Q9UJ04 414 aa6.12□□□□□ -1.43
A1CF-207ENST00000395495 UBTFL1P0CB47 393 aaPredicted RBP6.12□□□□□ -1.43
A1CF-207ENST00000395495 MAP2K1Q02750 393 aaPredicted RBP6.12□□□□□ -1.43
A1CF-207ENST00000395495 LARP1Q6PKG0 1096 aaKnown RBP6.12□□□□□ -1.43
A1CF-207ENST00000395495 ATF7IPQ6VMQ6 1270 aa6.12□□□□□ -1.43
A1CF-207ENST00000395495 WASF1Q92558 559 aa6.12□□□□□ -1.43
A1CF-207ENST00000395495 GSTTP1A0A1W2PQM5 241 aa6.12□□□□□ -1.43
A1CF-207ENST00000395495 TAF3Q5VWG9 929 aa6.12□□□□□ -1.43
A1CF-207ENST00000395495 PPP1R9BQ96SB3 815 aa6.12□□□□□ -1.43
A1CF-207ENST00000395495 SEC63Q9UGP8 760 aaKnown RBP6.12□□□□□ -1.43
A1CF-207ENST00000395495 GCOM1H8Y6P7 765 aaPredicted RBP6.11□□□□□ -1.43
A1CF-207ENST00000395495 NDC80O14777 642 aa6.11□□□□□ -1.43
A1CF-207ENST00000395495 SH3BP5O60239 455 aa6.11□□□□□ -1.43
A1CF-207ENST00000395495 MYZAPP0CAP1 466 aa6.11□□□□□ -1.43
A1CF-207ENST00000395495 CEP135Q66GS9 1140 aa6.11□□□□□ -1.43
A1CF-207ENST00000395495 TATP17735 454 aaPredicted RBP6.11□□□□□ -1.43
A1CF-207ENST00000395495 ACTN2P35609 894 aa6.11□□□□□ -1.43
A1CF-207ENST00000395495 GIMAP7Q8NHV1 300 aa6.11□□□□□ -1.43
A1CF-207ENST00000395495 STAC3Q96MF2 364 aa6.11□□□□□ -1.43
A1CF-207ENST00000395495 FAM114A2Q9NRY5 505 aa6.11□□□□□ -1.43
A1CF-207ENST00000395495 LPXNO60711 386 aa6.11□□□□□ -1.43
A1CF-207ENST00000395495 RSPH6AQ9H0K4 717 aa6.11□□□□□ -1.43
A1CF-207ENST00000395495 CENPHQ9H3R5 247 aa6.11□□□□□ -1.43
A1CF-207ENST00000395495 ZNF397Q8NF99 534 aaPredicted RBP6.11□□□□□ -1.43
A1CF-207ENST00000395495 C6orf163Q5TEZ5 329 aa6.11□□□□□ -1.43
A1CF-207ENST00000395495 TSG101Q99816 390 aa6.11□□□□□ -1.43
A1CF-207ENST00000395495 BCS1LQ9Y276 419 aa6.11□□□□□ -1.43
A1CF-207ENST00000395495 DIAPH1O60610 1272 aaKnown RBP6.11□□□□□ -1.43
A1CF-207ENST00000395495 AIMP1Q12904 312 aaKnown RBP6.11□□□□□ -1.43
A1CF-207ENST00000395495 CAVIN1Q6NZI2 390 aaKnown RBP6.11□□□□□ -1.43
A1CF-207ENST00000395495 MTERF4Q7Z6M4 381 aaKnown RBP6.11□□□□□ -1.43
A1CF-207ENST00000395495 NLRP13Q86W25 1043 aa6.11□□□□□ -1.43
A1CF-207ENST00000395495 ZNF652Q9Y2D9 606 aa6.11□□□□□ -1.43
A1CF-207ENST00000395495 SSFA2P28290 1259 aa6.11□□□□□ -1.43
A1CF-207ENST00000395495 GNAI1P63096 354 aa6.11□□□□□ -1.43
A1CF-207ENST00000395495 TOP2BQ02880 1626 aa6.11□□□□□ -1.43
A1CF-207ENST00000395495 UBAC1Q9BSL1 405 aa6.11□□□□□ -1.43
A1CF-207ENST00000395495 TAOK3Q9H2K8 898 aa6.11□□□□□ -1.43
A1CF-207ENST00000395495 PTPRTO14522 1441 aa6.1□□□□□ -1.43
A1CF-207ENST00000395495 HMGB3O15347 200 aaKnown RBP6.1□□□□□ -1.43
A1CF-207ENST00000395495 APLP1P51693 650 aa6.1□□□□□ -1.43
A1CF-207ENST00000395495 TIGD1Q96MW7 591 aa6.1□□□□□ -1.43
A1CF-207ENST00000395495 RAB34Q9BZG1 259 aa6.1□□□□□ -1.43
A1CF-207ENST00000395495 TFCP2L1Q9NZI6 479 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms