RNA–Protein interactions for RNA: ENST00000395363.5

HLA-DQA1-203, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,206 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-203ENST00000395363 DDX54Q8TDD1 881 aaKnown RBP16.12■□□□□ 0.17
HLA-DQA1-203ENST00000395363 PARD3Q8TEW0 1356 aa16.12■□□□□ 0.17
HLA-DQA1-203ENST00000395363 BCL9O00512 1426 aa16.11■□□□□ 0.17
HLA-DQA1-203ENST00000395363 PKD1L3Q7Z443 1732 aa16.11■□□□□ 0.17
HLA-DQA1-203ENST00000395363 TNNT2P45379 298 aaPredicted RBP16.11■□□□□ 0.17
HLA-DQA1-203ENST00000395363 BCL11BQ9C0K0 894 aaPredicted RBP16.11■□□□□ 0.17
HLA-DQA1-203ENST00000395363 PDGFDQ9GZP0 370 aaPredicted RBP16.11■□□□□ 0.17
HLA-DQA1-203ENST00000395363 PAPPAQ13219 1627 aa16.11■□□□□ 0.17
HLA-DQA1-203ENST00000395363 PPM1GO15355 546 aaPredicted RBP16.1■□□□□ 0.17
HLA-DQA1-203ENST00000395363 LY75O60449 1722 aa16.1■□□□□ 0.17
HLA-DQA1-203ENST00000395363 FLT4P35916 1363 aa16.09■□□□□ 0.17
HLA-DQA1-203ENST00000395363 PANK3Q9H999 370 aa16.07■□□□□ 0.16
HLA-DQA1-203ENST00000395363 INSRP06213 1382 aa16.07■□□□□ 0.16
HLA-DQA1-203ENST00000395363 SMG6Q86US8 1419 aaKnown RBP16.06■□□□□ 0.16
HLA-DQA1-203ENST00000395363 CGNL1Q0VF96 1302 aa16.06■□□□□ 0.16
HLA-DQA1-203ENST00000395363 KCNQ4P56696 695 aa16.06■□□□□ 0.16
HLA-DQA1-203ENST00000395363 TXNRD1Q16881 649 aa16.06■□□□□ 0.16
HLA-DQA1-203ENST00000395363 VIRMAQ69YN4 1812 aaKnown RBP16.05■□□□□ 0.16
HLA-DQA1-203ENST00000395363 TAF1LQ8IZX4 1826 aa16.05■□□□□ 0.16
HLA-DQA1-203ENST00000395363 PLSCR1O15162 318 aa16.05■□□□□ 0.16
HLA-DQA1-203ENST00000395363 NSD2O96028 1365 aa16.04■□□□□ 0.16
HLA-DQA1-203ENST00000395363 SYTL4Q96C24 671 aaPredicted RBP16.04■□□□□ 0.16
HLA-DQA1-203ENST00000395363 KIF7Q2M1P5 1343 aa16.03■□□□□ 0.16
HLA-DQA1-203ENST00000395363 NBPF14Q5TI25 921 aa16.03■□□□□ 0.16
HLA-DQA1-203ENST00000395363 ZCRB1Q8TBF4 217 aaKnown RBP16.03■□□□□ 0.16
HLA-DQA1-203ENST00000395363 POLKQ9UBT6 870 aa16.03■□□□□ 0.16
HLA-DQA1-203ENST00000395363 MAPK8IP2Q13387 824 aaPredicted RBP16.02■□□□□ 0.16
HLA-DQA1-203ENST00000395363 LRRC4BQ9NT99 713 aa16.02■□□□□ 0.16
HLA-DQA1-203ENST00000395363 C5P01031 1676 aa16.02■□□□□ 0.15
HLA-DQA1-203ENST00000395363 PRIM1P49642 420 aaKnown RBP16.01■□□□□ 0.15
HLA-DQA1-203ENST00000395363 QSER1Q2KHR3 1735 aa16.01■□□□□ 0.15
HLA-DQA1-203ENST00000395363 NCAPD2Q15021 1401 aa16.01■□□□□ 0.15
HLA-DQA1-203ENST00000395363 ZBTB7AO95365 584 aa16■□□□□ 0.15
HLA-DQA1-203ENST00000395363 ZNF827Q17R98 1081 aa16■□□□□ 0.15
HLA-DQA1-203ENST00000395363 RAPGEF4Q8WZA2 1011 aa16■□□□□ 0.15
HLA-DQA1-203ENST00000395363 CNGB1Q14028 1251 aaPredicted RBP15.99■□□□□ 0.15
HLA-DQA1-203ENST00000395363 EYA1Q99502 592 aa15.99■□□□□ 0.15
HLA-DQA1-203ENST00000395363 KIF24Q5T7B8 1368 aa15.99■□□□□ 0.15
HLA-DQA1-203ENST00000395363 WASHC2AQ641Q2 1341 aa15.98■□□□□ 0.15
HLA-DQA1-203ENST00000395363 CYP27B1O15528 508 aa15.98■□□□□ 0.15
HLA-DQA1-203ENST00000395363 TATP17735 454 aaPredicted RBP15.98■□□□□ 0.15
HLA-DQA1-203ENST00000395363 EIF4A2Q14240 407 aaKnown RBP15.98■□□□□ 0.15
HLA-DQA1-203ENST00000395363 ATF5Q9Y2D1 282 aaPredicted RBP15.97■□□□□ 0.15
HLA-DQA1-203ENST00000395363 SLC15A2Q16348 729 aa15.96■□□□□ 0.15
HLA-DQA1-203ENST00000395363 STK32BQ9NY57 414 aa15.96■□□□□ 0.15
HLA-DQA1-203ENST00000395363 PCDH11XQ9BZA7 1347 aa15.94■□□□□ 0.14
HLA-DQA1-203ENST00000395363 PCDH11YQ9BZA8 1340 aa15.94■□□□□ 0.14
HLA-DQA1-203ENST00000395363 MORC1Q86VD1 984 aa15.94■□□□□ 0.14
HLA-DQA1-203ENST00000395363 UBR3Q6ZT12 1888 aa15.94■□□□□ 0.14
HLA-DQA1-203ENST00000395363 AMER1Q5JTC6 1135 aaPredicted RBP15.93■□□□□ 0.14
HLA-DQA1-203ENST00000395363 AEBP1Q8IUX7 1158 aa15.93■□□□□ 0.14
HLA-DQA1-203ENST00000395363 SPON1Q9HCB6 807 aa15.93■□□□□ 0.14
HLA-DQA1-203ENST00000395363 COL24A1Q17RW2 1714 aa15.92■□□□□ 0.14
HLA-DQA1-203ENST00000395363 CC2D1BQ5T0F9 858 aaKnown RBP15.92■□□□□ 0.14
HLA-DQA1-203ENST00000395363 KNSTRNQ9Y448 316 aa15.92■□□□□ 0.14
HLA-DQA1-203ENST00000395363 SCN11AQ9UI33 1791 aa15.91■□□□□ 0.14
HLA-DQA1-203ENST00000395363 MPRIPQ6WCQ1 1025 aa15.91■□□□□ 0.14
HLA-DQA1-203ENST00000395363 PPP1R1BQ9UD71 204 aaPredicted RBP15.91■□□□□ 0.14
HLA-DQA1-203ENST00000395363 C4BP0C0L5 1744 aa15.91■□□□□ 0.14
HLA-DQA1-203ENST00000395363 PTGER2P43116 358 aa15.9■□□□□ 0.14
HLA-DQA1-203ENST00000395363 AKT1S1Q96B36 256 aa15.9■□□□□ 0.14
HLA-DQA1-203ENST00000395363 UTRNP46939 3433 aa15.9■□□□□ 0.14
HLA-DQA1-203ENST00000395363 IGSF1Q8N6C5 1336 aa15.9■□□□□ 0.14
HLA-DQA1-203ENST00000395363 SMIM5Q71RC9 77 aa15.89■□□□□ 0.13
HLA-DQA1-203ENST00000395363 CCNL1Q9UK58 526 aaPredicted RBP15.89■□□□□ 0.13
HLA-DQA1-203ENST00000395363 PNPLA7Q6ZV29 1317 aa15.89■□□□□ 0.13
HLA-DQA1-203ENST00000395363 PALLDQ8WX93 1383 aa15.88■□□□□ 0.13
HLA-DQA1-203ENST00000395363 GOLGB1Q14789 3259 aaKnown RBP15.88■□□□□ 0.13
HLA-DQA1-203ENST00000395363 PER1O15534 1290 aaPredicted RBP15.87■□□□□ 0.13
HLA-DQA1-203ENST00000395363 PIGBQ92521 554 aa15.87■□□□□ 0.13
HLA-DQA1-203ENST00000395363 MYH14Q7Z406 1995 aaKnown RBP15.87■□□□□ 0.13
HLA-DQA1-203ENST00000395363 COL5A3P25940 1745 aaPredicted RBP15.86■□□□□ 0.13
HLA-DQA1-203ENST00000395363 PHKG2P15735 406 aa15.86■□□□□ 0.13
HLA-DQA1-203ENST00000395363 AMIGO3Q86WK7 504 aa15.86■□□□□ 0.13
HLA-DQA1-203ENST00000395363 SPG7Q9UQ90 795 aa15.86■□□□□ 0.13
HLA-DQA1-203ENST00000395363 KDM6AO15550 1401 aaPredicted RBP15.85■□□□□ 0.13
HLA-DQA1-203ENST00000395363 SLC27A3Q5K4L6 730 aa15.85■□□□□ 0.13
HLA-DQA1-203ENST00000395363 SGIP1Q9BQI5 828 aa15.85■□□□□ 0.13
HLA-DQA1-203ENST00000395363 MTFR1LQ9H019 292 aa15.84■□□□□ 0.13
HLA-DQA1-203ENST00000395363 TFCP2L1Q9NZI6 479 aa15.84■□□□□ 0.13
HLA-DQA1-203ENST00000395363 COL3A1P02461 1466 aaPredicted RBP15.84■□□□□ 0.13
HLA-DQA1-203ENST00000395363 IL13P35225 146 aa15.83■□□□□ 0.12
HLA-DQA1-203ENST00000395363 MTHFSP49914 203 aa15.83■□□□□ 0.12
HLA-DQA1-203ENST00000395363 NKX1-1Q15270 411 aaPredicted RBP15.83■□□□□ 0.12
HLA-DQA1-203ENST00000395363 MSL1Q68DK7 614 aa15.83■□□□□ 0.12
HLA-DQA1-203ENST00000395363 SULT6B1Q6IMI4 303 aa15.83■□□□□ 0.12
HLA-DQA1-203ENST00000395363 ASAP1Q9ULH1 1129 aa15.83■□□□□ 0.12
HLA-DQA1-203ENST00000395363 HMOX1P09601 288 aa15.82■□□□□ 0.12
HLA-DQA1-203ENST00000395363 ZNF530Q6P9A1 599 aaPredicted RBP15.82■□□□□ 0.12
HLA-DQA1-203ENST00000395363 FHDC1Q9C0D6 1143 aaPredicted RBP15.82■□□□□ 0.12
HLA-DQA1-203ENST00000395363 TJP1Q07157 1748 aa15.82■□□□□ 0.12
HLA-DQA1-203ENST00000395363 C4AP0C0L4 1744 aa15.81■□□□□ 0.12
HLA-DQA1-203ENST00000395363 CHD4Q14839 1912 aa15.81■□□□□ 0.12
HLA-DQA1-203ENST00000395363 COL23A1Q86Y22 540 aaPredicted RBP15.81■□□□□ 0.12
HLA-DQA1-203ENST00000395363 IFNL2Q8IZJ0 200 aa15.81■□□□□ 0.12
HLA-DQA1-203ENST00000395363 KLHL34Q8N239 644 aa15.81■□□□□ 0.12
HLA-DQA1-203ENST00000395363 TMOD3Q9NYL9 352 aa15.81■□□□□ 0.12
HLA-DQA1-203ENST00000395363 PPP4R3CPQ6ZMV5 832 aa15.8■□□□□ 0.12
HLA-DQA1-203ENST00000395363 LINC00116Q8NCU8 138 aa15.8■□□□□ 0.12
HLA-DQA1-203ENST00000395363 KDRP35968 1356 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms