RNA–Protein interactions for RNA: ENST00000395358.7

RAPGEF3-202, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-202ENST00000395358 GPS2Q13227 327 aa13.75□□□□□ -0.21
RAPGEF3-202ENST00000395358 AXDND1Q5T1B0 1012 aaPredicted RBP13.75□□□□□ -0.21
RAPGEF3-202ENST00000395358 NEXMIFQ5QGS0 1516 aa13.75□□□□□ -0.21
RAPGEF3-202ENST00000395358 PLEKHH1Q9ULM0 1364 aa13.75□□□□□ -0.21
RAPGEF3-202ENST00000395358 BANK1Q8NDB2 785 aa13.75□□□□□ -0.21
RAPGEF3-202ENST00000395358 DEF6Q9H4E7 631 aa13.75□□□□□ -0.21
RAPGEF3-202ENST00000395358 BCCIPQ9P287 314 aaKnown RBP eCLIP13.75□□□□□ -0.21
RAPGEF3-202ENST00000395358 MYRIPQ8NFW9 859 aa13.75□□□□□ -0.21
RAPGEF3-202ENST00000395358 PPIP5K1Q6PFW1 1433 aa13.74□□□□□ -0.21
RAPGEF3-202ENST00000395358 DIAPH1O60610 1272 aaKnown RBP13.74□□□□□ -0.21
RAPGEF3-202ENST00000395358 CHMP4CQ96CF2 233 aa13.74□□□□□ -0.21
RAPGEF3-202ENST00000395358 CEP170BQ9Y4F5 1589 aaPredicted RBP13.74□□□□□ -0.21
RAPGEF3-202ENST00000395358 ANKRD36BQ8N2N9 1353 aa13.74□□□□□ -0.21
RAPGEF3-202ENST00000395358 SEC24BO95487 1268 aa13.74□□□□□ -0.21
RAPGEF3-202ENST00000395358 GTF2F1P35269 517 aaKnown RBP eCLIP13.74□□□□□ -0.21
RAPGEF3-202ENST00000395358 ALKQ9UM73 1620 aa13.74□□□□□ -0.21
RAPGEF3-202ENST00000395358 TULP1O00294 542 aaPredicted RBP13.74□□□□□ -0.21
RAPGEF3-202ENST00000395358 PIP4K2BP78356 416 aa13.73□□□□□ -0.21
RAPGEF3-202ENST00000395358 HOMEZQ8IX15 550 aa13.73□□□□□ -0.21
RAPGEF3-202ENST00000395358 PRPF40AO75400 957 aaKnown RBP13.73□□□□□ -0.21
RAPGEF3-202ENST00000395358 BRD4O60885 1362 aaPredicted RBP13.73□□□□□ -0.21
RAPGEF3-202ENST00000395358 ROBO2Q9HCK4 1378 aa13.73□□□□□ -0.21
RAPGEF3-202ENST00000395358 CWC15Q9P013 229 aaKnown RBP13.73□□□□□ -0.21
RAPGEF3-202ENST00000395358 FAM135BQ49AJ0 1406 aa13.72□□□□□ -0.21
RAPGEF3-202ENST00000395358 NEURL4Q96JN8 1562 aa13.72□□□□□ -0.21
RAPGEF3-202ENST00000395358 NPHP1O15259 732 aa13.72□□□□□ -0.21
RAPGEF3-202ENST00000395358 CLUAP1Q96AJ1 413 aa13.72□□□□□ -0.21
RAPGEF3-202ENST00000395358 NME9Q86XW9 330 aa13.72□□□□□ -0.21
RAPGEF3-202ENST00000395358 TMEM131LA2VDJ0 1609 aa13.72□□□□□ -0.21
RAPGEF3-202ENST00000395358 ZNF500O60304 480 aaPredicted RBP13.71□□□□□ -0.21
RAPGEF3-202ENST00000395358 KRT28Q7Z3Y7 464 aa13.71□□□□□ -0.21
RAPGEF3-202ENST00000395358 RGS22Q8NE09 1264 aa13.71□□□□□ -0.21
RAPGEF3-202ENST00000395358 OGFRQ9NZT2 677 aa13.71□□□□□ -0.21
RAPGEF3-202ENST00000395358 TRPM1Q7Z4N2 1603 aa13.71□□□□□ -0.21
RAPGEF3-202ENST00000395358 FOXD4L6Q3SYB3 417 aaPredicted RBP13.71□□□□□ -0.21
RAPGEF3-202ENST00000395358 FOXD4L3Q6VB84 417 aaPredicted RBP13.71□□□□□ -0.21
RAPGEF3-202ENST00000395358 IFT57Q9NWB7 429 aa13.71□□□□□ -0.21
RAPGEF3-202ENST00000395358 TOM1O60784 492 aa13.71□□□□□ -0.22
RAPGEF3-202ENST00000395358 PHF14O94880 888 aa13.71□□□□□ -0.22
RAPGEF3-202ENST00000395358 PPP1R9BQ96SB3 815 aa13.71□□□□□ -0.22
RAPGEF3-202ENST00000395358 FEZ1Q99689 392 aa13.71□□□□□ -0.22
RAPGEF3-202ENST00000395358 A0A0G2JS52 829 aa13.7□□□□□ -0.22
RAPGEF3-202ENST00000395358 CIZ1Q9ULV3 898 aaPredicted RBP13.7□□□□□ -0.22
RAPGEF3-202ENST00000395358 CALRP27797 417 aaKnown RBP13.7□□□□□ -0.22
RAPGEF3-202ENST00000395358 MYCNP04198 464 aaPredicted RBP13.7□□□□□ -0.22
RAPGEF3-202ENST00000395358 ATP2B3Q16720 1220 aa13.7□□□□□ -0.22
RAPGEF3-202ENST00000395358 TBC1D32Q96NH3 1257 aa13.7□□□□□ -0.22
RAPGEF3-202ENST00000395358 GABPB1Q06547 395 aaPredicted RBP13.69□□□□□ -0.22
RAPGEF3-202ENST00000395358 NSD2O96028 1365 aa13.69□□□□□ -0.22
RAPGEF3-202ENST00000395358 TMEM94Q12767 1356 aa13.69□□□□□ -0.22
RAPGEF3-202ENST00000395358 NPHP3Q7Z494 1330 aa13.69□□□□□ -0.22
RAPGEF3-202ENST00000395358 MROH2AA6NES4 1674 aa13.69□□□□□ -0.22
RAPGEF3-202ENST00000395358 NOLC1Q14978 699 aaKnown RBP eCLIP13.69□□□□□ -0.22
RAPGEF3-202ENST00000395358 CCDC146Q8IYE0 955 aa13.69□□□□□ -0.22
RAPGEF3-202ENST00000395358 ZNF622Q969S3 477 aaKnown RBP eCLIP13.69□□□□□ -0.22
RAPGEF3-202ENST00000395358 SYCE3A1L190 88 aa13.69□□□□□ -0.22
RAPGEF3-202ENST00000395358 EVA1CP58658 441 aa13.69□□□□□ -0.22
RAPGEF3-202ENST00000395358 RSPH14Q9UHP6 348 aa13.69□□□□□ -0.22
RAPGEF3-202ENST00000395358 KCNH5Q8NCM2 988 aa13.69□□□□□ -0.22
RAPGEF3-202ENST00000395358 RTF1Q92541 710 aaKnown RBP13.69□□□□□ -0.22
RAPGEF3-202ENST00000395358 HSP90B1P14625 803 aaKnown RBP13.68□□□□□ -0.22
RAPGEF3-202ENST00000395358 KRT222Q8N1A0 295 aa13.68□□□□□ -0.22
RAPGEF3-202ENST00000395358 TTC21BQ7Z4L5 1316 aa13.68□□□□□ -0.22
RAPGEF3-202ENST00000395358 SETBP1Q9Y6X0 1596 aa13.68□□□□□ -0.22
RAPGEF3-202ENST00000395358 TTC21AQ8NDW8 1320 aa13.68□□□□□ -0.22
RAPGEF3-202ENST00000395358 LMTK3Q96Q04 1460 aa13.68□□□□□ -0.22
RAPGEF3-202ENST00000395358 LAMC1P11047 1609 aa13.68□□□□□ -0.22
RAPGEF3-202ENST00000395358 NUCB2P80303 420 aa13.68□□□□□ -0.22
RAPGEF3-202ENST00000395358 C3P01024 1663 aa13.68□□□□□ -0.22
RAPGEF3-202ENST00000395358 CCDC112Q8NEF3 446 aa13.67□□□□□ -0.22
RAPGEF3-202ENST00000395358 CCDC9Q9Y3X0 531 aaKnown RBP13.67□□□□□ -0.22
RAPGEF3-202ENST00000395358 C10orf67Q8IYJ2 551 aa13.67□□□□□ -0.22
RAPGEF3-202ENST00000395358 TSPY26PQ9H489 355 aa13.67□□□□□ -0.22
RAPGEF3-202ENST00000395358 BCL2L12Q9HB09 334 aa13.67□□□□□ -0.22
RAPGEF3-202ENST00000395358 NRXN1Q9ULB1 1477 aa13.67□□□□□ -0.22
RAPGEF3-202ENST00000395358 ADAMTS13Q76LX8 1427 aa13.67□□□□□ -0.22
RAPGEF3-202ENST00000395358 UBAP1LF5GYI3 381 aa13.67□□□□□ -0.22
RAPGEF3-202ENST00000395358 FYB1O15117 783 aa13.67□□□□□ -0.22
RAPGEF3-202ENST00000395358 SSFA2P28290 1259 aa13.67□□□□□ -0.22
RAPGEF3-202ENST00000395358 KLHL40Q2TBA0 621 aa13.67□□□□□ -0.22
RAPGEF3-202ENST00000395358 CARD14Q9BXL6 1004 aa13.67□□□□□ -0.22
RAPGEF3-202ENST00000395358 RASSF4Q9H2L5 321 aa13.67□□□□□ -0.22
RAPGEF3-202ENST00000395358 ZNF335Q9H4Z2 1342 aaPredicted RBP13.67□□□□□ -0.22
RAPGEF3-202ENST00000395358 A0A1W2PP64 1363 aa13.67□□□□□ -0.22
RAPGEF3-202ENST00000395358 PLEKHG3A1L390 1219 aa13.66□□□□□ -0.22
RAPGEF3-202ENST00000395358 PDZRN3Q9UPQ7 1066 aa13.66□□□□□ -0.22
RAPGEF3-202ENST00000395358 RRS1Q15050 365 aaKnown RBP13.66□□□□□ -0.22
RAPGEF3-202ENST00000395358 ORAI2Q96SN7 254 aa13.66□□□□□ -0.22
RAPGEF3-202ENST00000395358 JARID2Q92833 1246 aaPredicted RBP13.65□□□□□ -0.22
RAPGEF3-202ENST00000395358 PER1O15534 1290 aaPredicted RBP13.65□□□□□ -0.22
RAPGEF3-202ENST00000395358 SPC24Q8NBT2 197 aa13.65□□□□□ -0.22
RAPGEF3-202ENST00000395358 PANK1Q8TE04 598 aa13.65□□□□□ -0.22
RAPGEF3-202ENST00000395358 KIF16BQ96L93 1317 aa13.65□□□□□ -0.22
RAPGEF3-202ENST00000395358 SIGLEC1Q9BZZ2 1709 aa13.65□□□□□ -0.22
RAPGEF3-202ENST00000395358 MYCBPQ99417 103 aaPredicted RBP13.64□□□□□ -0.23
RAPGEF3-202ENST00000395358 ASXL1Q8IXJ9 1541 aa13.64□□□□□ -0.23
RAPGEF3-202ENST00000395358 TDO2P48775 406 aa13.64□□□□□ -0.23
RAPGEF3-202ENST00000395358 SLAIN2Q9P270 581 aa13.64□□□□□ -0.23
RAPGEF3-202ENST00000395358 LOC102724159A0A0B4J2E5 919 aa13.64□□□□□ -0.23
RAPGEF3-202ENST00000395358 PWP2Q15269 919 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms