RNA–Protein interactions for RNA: ENST00000394939.3

GTF2IRD2B-201, Transcript of GTF2I repeat domain containing 2B, humanhuman

TSL 3

Gene GTF2IRD2B, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD2B-201ENST00000394939 HMOX1P09601 288 aa16.1■□□□□ 0.17
GTF2IRD2B-201ENST00000394939 IL2RBP14784 551 aa16.09■□□□□ 0.17
GTF2IRD2B-201ENST00000394939 TATP17735 454 aaPredicted RBP16.09■□□□□ 0.17
GTF2IRD2B-201ENST00000394939 KCNA4P22459 653 aa16.09■□□□□ 0.17
GTF2IRD2B-201ENST00000394939 BARGINQ6ZT62 677 aa16.09■□□□□ 0.17
GTF2IRD2B-201ENST00000394939 PLEKHG2Q9H7P9 1386 aa16.09■□□□□ 0.17
GTF2IRD2B-201ENST00000394939 RBM6P78332 1123 aaKnown RBP16.08■□□□□ 0.16
GTF2IRD2B-201ENST00000394939 FAM9BQ8IZU0 186 aa16.08■□□□□ 0.16
GTF2IRD2B-201ENST00000394939 ADAMTS8Q9UP79 889 aa16.08■□□□□ 0.16
GTF2IRD2B-201ENST00000394939 AEBP1Q8IUX7 1158 aa16.07■□□□□ 0.16
GTF2IRD2B-201ENST00000394939 RSPH6AQ9H0K4 717 aa16.07■□□□□ 0.16
GTF2IRD2B-201ENST00000394939 MAPK8IP3Q9UPT6 1336 aa16.07■□□□□ 0.16
GTF2IRD2B-201ENST00000394939 PARP4Q9UKK3 1724 aaKnown RBP16.06■□□□□ 0.16
GTF2IRD2B-201ENST00000394939 RXRBP28702 533 aa16.06■□□□□ 0.16
GTF2IRD2B-201ENST00000394939 PRKAR2BP31323 418 aa16.06■□□□□ 0.16
GTF2IRD2B-201ENST00000394939 FAM98CQ17RN3 349 aaKnown RBP16.06■□□□□ 0.16
GTF2IRD2B-201ENST00000394939 A0A0G2JS52 829 aa16.05■□□□□ 0.16
GTF2IRD2B-201ENST00000394939 MYT1Q01538 1121 aa16.05■□□□□ 0.16
GTF2IRD2B-201ENST00000394939 AMOTQ4VCS5 1084 aa16.05■□□□□ 0.16
GTF2IRD2B-201ENST00000394939 PLEKHO1Q53GL0 409 aaPredicted RBP16.05■□□□□ 0.16
GTF2IRD2B-201ENST00000394939 SPG7Q9UQ90 795 aa16.05■□□□□ 0.16
GTF2IRD2B-201ENST00000394939 WNK3Q9BYP7 1800 aa16.05■□□□□ 0.16
GTF2IRD2B-201ENST00000394939 GLI3P10071 1580 aa16.04■□□□□ 0.16
GTF2IRD2B-201ENST00000394939 OVOS2A0A0G2JMS6 1433 aa16.04■□□□□ 0.16
GTF2IRD2B-201ENST00000394939 RUNDC1Q96C34 613 aa16.04■□□□□ 0.16
GTF2IRD2B-201ENST00000394939 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.04■□□□□ 0.16
GTF2IRD2B-201ENST00000394939 RGS17Q9UGC6 210 aaPredicted RBP16.04■□□□□ 0.16
GTF2IRD2B-201ENST00000394939 DISP2A7MBM2 1401 aa16.03■□□□□ 0.16
GTF2IRD2B-201ENST00000394939 EXOC5O00471 708 aa16.03■□□□□ 0.16
GTF2IRD2B-201ENST00000394939 MEGF6O75095 1541 aa16.03■□□□□ 0.16
GTF2IRD2B-201ENST00000394939 ONECUT3O60422 494 aaPredicted RBP16.02■□□□□ 0.16
GTF2IRD2B-201ENST00000394939 DDB1Q16531 1140 aa16.02■□□□□ 0.16
GTF2IRD2B-201ENST00000394939 GAS2L2Q8NHY3 880 aa16.02■□□□□ 0.16
GTF2IRD2B-201ENST00000394939 ZCRB1Q8TBF4 217 aaKnown RBP16.02■□□□□ 0.16
GTF2IRD2B-201ENST00000394939 POTEAQ6S8J7 498 aa16.01■□□□□ 0.15
GTF2IRD2B-201ENST00000394939 PLEKHF1Q96S99 279 aa16.01■□□□□ 0.15
GTF2IRD2B-201ENST00000394939 PCDH11XQ9BZA7 1347 aa16■□□□□ 0.15
GTF2IRD2B-201ENST00000394939 PCDH11YQ9BZA8 1340 aa16■□□□□ 0.15
GTF2IRD2B-201ENST00000394939 C1orf141Q5JVX7 400 aa16■□□□□ 0.15
GTF2IRD2B-201ENST00000394939 CCDC146Q8IYE0 955 aa16■□□□□ 0.15
GTF2IRD2B-201ENST00000394939 SEPT12Q8IYM1 358 aa16■□□□□ 0.15
GTF2IRD2B-201ENST00000394939 TNS2Q63HR2 1409 aa16■□□□□ 0.15
GTF2IRD2B-201ENST00000394939 THSD7AQ9UPZ6 1657 aa15.99■□□□□ 0.15
GTF2IRD2B-201ENST00000394939 PDE3BQ13370 1112 aa15.99■□□□□ 0.15
GTF2IRD2B-201ENST00000394939 ZNF530Q6P9A1 599 aaPredicted RBP15.99■□□□□ 0.15
GTF2IRD2B-201ENST00000394939 PKD1L3Q7Z443 1732 aa15.99■□□□□ 0.15
GTF2IRD2B-201ENST00000394939 PHACTR3Q96KR7 559 aa15.98■□□□□ 0.15
GTF2IRD2B-201ENST00000394939 LRRC37A3O60309 1634 aa15.97■□□□□ 0.15
GTF2IRD2B-201ENST00000394939 HSP90AB1P08238 724 aaKnown RBP15.97■□□□□ 0.15
GTF2IRD2B-201ENST00000394939 NFE2L2Q16236 605 aa15.97■□□□□ 0.15
GTF2IRD2B-201ENST00000394939 MTHFSDQ2M296 383 aaKnown RBP15.97■□□□□ 0.15
GTF2IRD2B-201ENST00000394939 IFNL2Q8IZJ0 200 aa15.97■□□□□ 0.15
GTF2IRD2B-201ENST00000394939 LMOD3Q0VAK6 560 aa15.96■□□□□ 0.15
GTF2IRD2B-201ENST00000394939 AKAP4Q5JQC9 854 aa15.96■□□□□ 0.15
GTF2IRD2B-201ENST00000394939 NGEFQ8N5V2 710 aa15.96■□□□□ 0.15
GTF2IRD2B-201ENST00000394939 DDX54Q8TDD1 881 aaKnown RBP15.96■□□□□ 0.15
GTF2IRD2B-201ENST00000394939 APAF1O14727 1248 aa15.95■□□□□ 0.14
GTF2IRD2B-201ENST00000394939 TMPOP42166 694 aaKnown RBP15.95■□□□□ 0.14
GTF2IRD2B-201ENST00000394939 RTF1Q92541 710 aaKnown RBP15.95■□□□□ 0.14
GTF2IRD2B-201ENST00000394939 GNAT3A8MTJ3 354 aa15.94■□□□□ 0.14
GTF2IRD2B-201ENST00000394939 PHKG2P15735 406 aa15.94■□□□□ 0.14
GTF2IRD2B-201ENST00000394939 MAP3K5Q99683 1374 aa15.94■□□□□ 0.14
GTF2IRD2B-201ENST00000394939 CYP27B1O15528 508 aa15.93■□□□□ 0.14
GTF2IRD2B-201ENST00000394939 HTATSF1O43719 755 aaKnown RBP15.93■□□□□ 0.14
GTF2IRD2B-201ENST00000394939 RIPK4P57078 832 aa15.93■□□□□ 0.14
GTF2IRD2B-201ENST00000394939 KRT27Q7Z3Y8 459 aa15.93■□□□□ 0.14
GTF2IRD2B-201ENST00000394939 RGS12O14924 1447 aa15.93■□□□□ 0.14
GTF2IRD2B-201ENST00000394939 NEUROD2Q15784 382 aa15.92■□□□□ 0.14
GTF2IRD2B-201ENST00000394939 DCAF5Q96JK2 942 aa15.92■□□□□ 0.14
GTF2IRD2B-201ENST00000394939 SHANK3Q9BYB0 1731 aa15.91■□□□□ 0.14
GTF2IRD2B-201ENST00000394939 NKX1-1Q15270 411 aaPredicted RBP15.91■□□□□ 0.14
GTF2IRD2B-201ENST00000394939 MARCH10Q8NA82 808 aaPredicted RBP15.91■□□□□ 0.14
GTF2IRD2B-201ENST00000394939 RRP7AQ9Y3A4 280 aaKnown RBP15.91■□□□□ 0.14
GTF2IRD2B-201ENST00000394939 U3KPZ7 1027 aaPredicted RBP15.9■□□□□ 0.14
GTF2IRD2B-201ENST00000394939 BRWD3Q6RI45 1802 aa15.89■□□□□ 0.13
GTF2IRD2B-201ENST00000394939 CALD1Q05682 793 aaKnown RBP15.89■□□□□ 0.13
GTF2IRD2B-201ENST00000394939 CCDC27Q2M243 656 aa15.89■□□□□ 0.13
GTF2IRD2B-201ENST00000394939 DLG5Q8TDM6 1919 aa15.89■□□□□ 0.13
GTF2IRD2B-201ENST00000394939 KAT6BQ8WYB5 2073 aa15.88■□□□□ 0.13
GTF2IRD2B-201ENST00000394939 HNRNPUQ00839 825 aaKnown RBP eCLIP15.88■□□□□ 0.13
GTF2IRD2B-201ENST00000394939 MPRIPQ6WCQ1 1025 aa15.88■□□□□ 0.13
GTF2IRD2B-201ENST00000394939 FAM196AQ6ZSG2 479 aa15.88■□□□□ 0.13
GTF2IRD2B-201ENST00000394939 BCL9O00512 1426 aa15.87■□□□□ 0.13
GTF2IRD2B-201ENST00000394939 ERVV-2B6SEH9 535 aa15.87■□□□□ 0.13
GTF2IRD2B-201ENST00000394939 RNMTO43148 476 aaKnown RBP15.87■□□□□ 0.13
GTF2IRD2B-201ENST00000394939 TEFQ10587 303 aa15.86■□□□□ 0.13
GTF2IRD2B-201ENST00000394939 SALL2Q9Y467 1007 aaPredicted RBP15.86■□□□□ 0.13
GTF2IRD2B-201ENST00000394939 SCN11AQ9UI33 1791 aa15.85■□□□□ 0.13
GTF2IRD2B-201ENST00000394939 CABP4P57796 275 aa15.85■□□□□ 0.13
GTF2IRD2B-201ENST00000394939 MCM10Q7L590 875 aa15.85■□□□□ 0.13
GTF2IRD2B-201ENST00000394939 TRIM35Q9UPQ4 493 aa15.85■□□□□ 0.13
GTF2IRD2B-201ENST00000394939 CEMIPQ8WUJ3 1361 aa15.85■□□□□ 0.13
GTF2IRD2B-201ENST00000394939 KDM6AO15550 1401 aaPredicted RBP15.85■□□□□ 0.13
GTF2IRD2B-201ENST00000394939 ADAMTS7Q9UKP4 1686 aa15.84■□□□□ 0.13
GTF2IRD2B-201ENST00000394939 WWC1Q8IX03 1113 aa15.84■□□□□ 0.13
GTF2IRD2B-201ENST00000394939 IL17REQ8NFR9 667 aa15.84■□□□□ 0.13
GTF2IRD2B-201ENST00000394939 LGR6Q9HBX8 967 aa15.84■□□□□ 0.13
GTF2IRD2B-201ENST00000394939 TMOD3Q9NYL9 352 aa15.84■□□□□ 0.13
GTF2IRD2B-201ENST00000394939 VIRMAQ69YN4 1812 aaKnown RBP15.83■□□□□ 0.12
GTF2IRD2B-201ENST00000394939 SENP3-EIF4A1A0A087X0R7 540 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms