RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 CD163L1Q9NR16 1453 aa7.77□□□□□ -1.17
CASC3-202ENST00000394114 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.77□□□□□ -1.17
CASC3-202ENST00000394114 FAM135BQ49AJ0 1406 aa7.77□□□□□ -1.17
CASC3-202ENST00000394114 WDR43Q15061 677 aaKnown RBP eCLIP7.77□□□□□ -1.17
CASC3-202ENST00000394114 FAM177A1Q8N128 213 aaPredicted RBP7.77□□□□□ -1.17
CASC3-202ENST00000394114 NUDT16Q96DE0 195 aaKnown RBP7.77□□□□□ -1.17
CASC3-202ENST00000394114 TBX22Q9Y458 520 aa7.77□□□□□ -1.17
CASC3-202ENST00000394114 UNCXA6NJT0 531 aa7.76□□□□□ -1.17
CASC3-202ENST00000394114 HDGFL2Q7Z4V5 671 aaPredicted RBP7.76□□□□□ -1.17
CASC3-202ENST00000394114 ANO8Q9HCE9 1232 aaPredicted RBP7.76□□□□□ -1.17
CASC3-202ENST00000394114 PPIP5K1Q6PFW1 1433 aa7.76□□□□□ -1.17
CASC3-202ENST00000394114 KCNA6P17658 529 aa7.76□□□□□ -1.17
CASC3-202ENST00000394114 GLMNQ92990 594 aa7.76□□□□□ -1.17
CASC3-202ENST00000394114 CHMP4AQ9BY43 222 aa7.76□□□□□ -1.17
CASC3-202ENST00000394114 SUPT16HQ9Y5B9 1047 aaKnown RBP7.76□□□□□ -1.17
CASC3-202ENST00000394114 PRR36Q9H6K5 1346 aa7.76□□□□□ -1.17
CASC3-202ENST00000394114 IRX6P78412 446 aaPredicted RBP7.76□□□□□ -1.17
CASC3-202ENST00000394114 CCDC146Q8IYE0 955 aa7.76□□□□□ -1.17
CASC3-202ENST00000394114 AKT1S1Q96B36 256 aa7.76□□□□□ -1.17
CASC3-202ENST00000394114 IVNS1ABPQ9Y6Y0 642 aa7.76□□□□□ -1.17
CASC3-202ENST00000394114 NINLQ9Y2I6 1382 aa7.75□□□□□ -1.17
CASC3-202ENST00000394114 ZNF142P52746 1687 aaPredicted RBP7.75□□□□□ -1.17
CASC3-202ENST00000394114 FYB1O15117 783 aa7.75□□□□□ -1.17
CASC3-202ENST00000394114 FBLN1P23142 703 aa7.75□□□□□ -1.17
CASC3-202ENST00000394114 CLCN1P35523 988 aa7.75□□□□□ -1.17
CASC3-202ENST00000394114 USP32Q8NFA0 1604 aa7.75□□□□□ -1.17
CASC3-202ENST00000394114 MTHFSP49914 203 aa7.75□□□□□ -1.17
CASC3-202ENST00000394114 DSG2Q14126 1118 aa7.74□□□□□ -1.17
CASC3-202ENST00000394114 SIRT1Q96EB6 747 aa7.74□□□□□ -1.17
CASC3-202ENST00000394114 POLR3EQ9NVU0 708 aa7.74□□□□□ -1.17
CASC3-202ENST00000394114 GDPD2Q9HCC8 539 aa7.74□□□□□ -1.17
CASC3-202ENST00000394114 GPCPD1Q9NPB8 672 aa7.74□□□□□ -1.17
CASC3-202ENST00000394114 ZRANB1Q9UGI0 708 aa7.74□□□□□ -1.17
CASC3-202ENST00000394114 ATP7BP35670 1465 aa7.74□□□□□ -1.17
CASC3-202ENST00000394114 RGPD8O14715 1765 aaPredicted RBP7.73□□□□□ -1.17
CASC3-202ENST00000394114 TBC1D12O60347 775 aa7.73□□□□□ -1.17
CASC3-202ENST00000394114 PTGDRQ13258 359 aa7.73□□□□□ -1.17
CASC3-202ENST00000394114 PMFBP1Q8TBY8 1022 aa7.73□□□□□ -1.17
CASC3-202ENST00000394114 PKNOX2Q96KN3 472 aa7.73□□□□□ -1.17
CASC3-202ENST00000394114 RFC5P40937 340 aa7.73□□□□□ -1.17
CASC3-202ENST00000394114 NME9Q86XW9 330 aa7.73□□□□□ -1.17
CASC3-202ENST00000394114 KIF20BQ96Q89 1820 aa7.73□□□□□ -1.17
CASC3-202ENST00000394114 DIP2AQ14689 1571 aa7.73□□□□□ -1.17
CASC3-202ENST00000394114 BLMP54132 1417 aaPredicted RBP7.72□□□□□ -1.17
CASC3-202ENST00000394114 POM121CA8CG34 1229 aa7.72□□□□□ -1.17
CASC3-202ENST00000394114 PPM1GO15355 546 aaPredicted RBP7.72□□□□□ -1.17
CASC3-202ENST00000394114 NEFLP07196 543 aa7.72□□□□□ -1.17
CASC3-202ENST00000394114 CSB-PGBD3P0DP91 1061 aa7.72□□□□□ -1.17
CASC3-202ENST00000394114 SSTR3P32745 418 aaPredicted RBP7.72□□□□□ -1.17
CASC3-202ENST00000394114 WWC1Q8IX03 1113 aa7.72□□□□□ -1.17
CASC3-202ENST00000394114 BEGAINQ9BUH8 593 aa7.72□□□□□ -1.17
CASC3-202ENST00000394114 XRN1Q8IZH2 1706 aaKnown RBP7.72□□□□□ -1.17
CASC3-202ENST00000394114 CDCA7LQ96GN5 454 aa7.72□□□□□ -1.17
CASC3-202ENST00000394114 PTCH1Q13635 1447 aa7.72□□□□□ -1.17
CASC3-202ENST00000394114 ITSN1Q15811 1721 aa7.72□□□□□ -1.17
CASC3-202ENST00000394114 NSD2O96028 1365 aa7.72□□□□□ -1.17
CASC3-202ENST00000394114 RBM47A0AV96 593 aaKnown RBP7.71□□□□□ -1.17
CASC3-202ENST00000394114 ACEP12821 1306 aa7.71□□□□□ -1.18
CASC3-202ENST00000394114 CDC42BPGQ6DT37 1551 aa7.71□□□□□ -1.18
CASC3-202ENST00000394114 CHD2O14647 1828 aaKnown RBP7.71□□□□□ -1.18
CASC3-202ENST00000394114 MYSM1Q5VVJ2 828 aa7.71□□□□□ -1.18
CASC3-202ENST00000394114 MTMR14Q8NCE2 650 aa7.71□□□□□ -1.18
CASC3-202ENST00000394114 NPHP4O75161 1426 aaPredicted RBP7.71□□□□□ -1.18
CASC3-202ENST00000394114 CPSF1Q10570 1443 aaKnown RBP7.71□□□□□ -1.18
CASC3-202ENST00000394114 POLR3AO14802 1390 aaPredicted RBP7.71□□□□□ -1.18
CASC3-202ENST00000394114 ADGRB2O60241 1585 aa7.71□□□□□ -1.18
CASC3-202ENST00000394114 ANKRD26Q9UPS8 1709 aa7.71□□□□□ -1.18
CASC3-202ENST00000394114 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.71□□□□□ -1.18
CASC3-202ENST00000394114 APAF1O14727 1248 aa7.71□□□□□ -1.18
CASC3-202ENST00000394114 NKTRP30414 1462 aaKnown RBP7.7□□□□□ -1.18
CASC3-202ENST00000394114 SHPRHQ149N8 1683 aa7.7□□□□□ -1.18
CASC3-202ENST00000394114 CFAP53Q96M91 514 aa7.7□□□□□ -1.18
CASC3-202ENST00000394114 NUDCQ9Y266 331 aa7.7□□□□□ -1.18
CASC3-202ENST00000394114 AKAP12Q02952 1782 aa7.7□□□□□ -1.18
CASC3-202ENST00000394114 TMEM259Q4ZIN3 620 aa7.7□□□□□ -1.18
CASC3-202ENST00000394114 CCDC125Q86Z20 511 aa7.7□□□□□ -1.18
CASC3-202ENST00000394114 EDC4Q6P2E9 1401 aaKnown RBP7.7□□□□□ -1.18
CASC3-202ENST00000394114 MON2Q7Z3U7 1717 aa7.7□□□□□ -1.18
CASC3-202ENST00000394114 MAP2P11137 1827 aaKnown RBP7.69□□□□□ -1.18
CASC3-202ENST00000394114 SMG6Q86US8 1419 aaKnown RBP7.69□□□□□ -1.18
CASC3-202ENST00000394114 U2SURPO15042 1029 aaKnown RBP7.69□□□□□ -1.18
CASC3-202ENST00000394114 MDM2Q00987 491 aaPredicted RBP7.69□□□□□ -1.18
CASC3-202ENST00000394114 REM2Q8IYK8 340 aaPredicted RBP7.69□□□□□ -1.18
CASC3-202ENST00000394114 NGDNQ8NEJ9 315 aaKnown RBP7.69□□□□□ -1.18
CASC3-202ENST00000394114 RRP7AQ9Y3A4 280 aaKnown RBP7.69□□□□□ -1.18
CASC3-202ENST00000394114 TOPAZ1Q8N9V7 1692 aa7.69□□□□□ -1.18
CASC3-202ENST00000394114 CARNS1A5YM72 827 aa7.69□□□□□ -1.18
CASC3-202ENST00000394114 MAP3K13O43283 966 aa7.69□□□□□ -1.18
CASC3-202ENST00000394114 U2AF1L5P0DN76 240 aaPredicted RBP7.69□□□□□ -1.18
CASC3-202ENST00000394114 PTGER2P43116 358 aa7.69□□□□□ -1.18
CASC3-202ENST00000394114 CLK2P49760 499 aaKnown RBP7.69□□□□□ -1.18
CASC3-202ENST00000394114 FOXK1P85037 733 aa7.69□□□□□ -1.18
CASC3-202ENST00000394114 U2AF1Q01081 240 aaKnown RBP eCLIP7.69□□□□□ -1.187e-7■■□□□ 13.3
CASC3-202ENST00000394114 EMILIN1Q9Y6C2 1016 aa7.69□□□□□ -1.18
CASC3-202ENST00000394114 PIK3R4Q99570 1358 aa7.69□□□□□ -1.18
CASC3-202ENST00000394114 NALCNQ8IZF0 1738 aa7.69□□□□□ -1.18
CASC3-202ENST00000394114 RRS1Q15050 365 aaKnown RBP7.68□□□□□ -1.18
CASC3-202ENST00000394114 COG3Q96JB2 828 aa7.68□□□□□ -1.18
CASC3-202ENST00000394114 TTC21BQ7Z4L5 1316 aa7.68□□□□□ -1.18
CASC3-202ENST00000394114 NUTM2GQ5VZR2 741 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms