RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 E9PCH4 1651 aa10.27□□□□□ -0.77
GABRA1-202ENST00000393943 NOLC1Q14978 699 aaKnown RBP eCLIP10.27□□□□□ -0.77
GABRA1-202ENST00000393943 TNMDQ9H2S6 317 aa10.27□□□□□ -0.77
GABRA1-202ENST00000393943 AMPHP49418 695 aa10.27□□□□□ -0.77
GABRA1-202ENST00000393943 ANKRD44Q8N8A2 993 aa10.27□□□□□ -0.77
GABRA1-202ENST00000393943 SCAND2PQ9GZW5 306 aaPredicted RBP10.27□□□□□ -0.77
GABRA1-202ENST00000393943 ACBD3Q9H3P7 528 aa10.27□□□□□ -0.77
GABRA1-202ENST00000393943 DCTPP1Q9H773 170 aa10.27□□□□□ -0.77
GABRA1-202ENST00000393943 IQGAP3Q86VI3 1631 aa10.26□□□□□ -0.77
GABRA1-202ENST00000393943 TPM1P09493 284 aa10.26□□□□□ -0.77
GABRA1-202ENST00000393943 MNS1Q8NEH6 495 aa10.26□□□□□ -0.77
GABRA1-202ENST00000393943 CARD14Q9BXL6 1004 aa10.26□□□□□ -0.77
GABRA1-202ENST00000393943 UNC13BO14795 1591 aa10.26□□□□□ -0.77
GABRA1-202ENST00000393943 MX1P20591 662 aa10.26□□□□□ -0.77
GABRA1-202ENST00000393943 PRIM1P49642 420 aaKnown RBP10.26□□□□□ -0.77
GABRA1-202ENST00000393943 CLASRPQ8N2M8 674 aaKnown RBP10.26□□□□□ -0.77
GABRA1-202ENST00000393943 TRPM2O94759 1503 aa10.26□□□□□ -0.77
GABRA1-202ENST00000393943 MYOM2P54296 1465 aa10.26□□□□□ -0.77
GABRA1-202ENST00000393943 HOOK1Q9UJC3 728 aaKnown RBP10.26□□□□□ -0.77
GABRA1-202ENST00000393943 TUBB4AP04350 444 aa10.25□□□□□ -0.77
GABRA1-202ENST00000393943 MRPL50Q8N5N7 158 aaKnown RBP10.25□□□□□ -0.77
GABRA1-202ENST00000393943 MYRIPQ8NFW9 859 aa10.25□□□□□ -0.77
GABRA1-202ENST00000393943 DDX19AQ9NUU7 478 aaKnown RBP10.25□□□□□ -0.77
GABRA1-202ENST00000393943 ADCY5O95622 1261 aa10.25□□□□□ -0.77
GABRA1-202ENST00000393943 BRPF1P55201 1214 aaPredicted RBP10.25□□□□□ -0.77
GABRA1-202ENST00000393943 HOMER1Q86YM7 354 aa10.25□□□□□ -0.77
GABRA1-202ENST00000393943 CALCOCO1Q9P1Z2 691 aa10.25□□□□□ -0.77
GABRA1-202ENST00000393943 ABCA8O94911 1581 aa10.25□□□□□ -0.77
GABRA1-202ENST00000393943 PTPRTO14522 1441 aa10.25□□□□□ -0.77
GABRA1-202ENST00000393943 C14orf37Q86TY3 774 aa10.25□□□□□ -0.77
GABRA1-202ENST00000393943 TMX3Q96JJ7 454 aa10.25□□□□□ -0.77
GABRA1-202ENST00000393943 ZNF396Q96N95 335 aaPredicted RBP10.25□□□□□ -0.77
GABRA1-202ENST00000393943 CFAP45Q9UL16 551 aa10.25□□□□□ -0.77
GABRA1-202ENST00000393943 REREQ9P2R6 1566 aa10.24□□□□□ -0.77
GABRA1-202ENST00000393943 CTAGE5O15320 804 aa10.24□□□□□ -0.77
GABRA1-202ENST00000393943 KINO60870 393 aaKnown RBP10.24□□□□□ -0.77
GABRA1-202ENST00000393943 NUTM2DQ5VT03 806 aaPredicted RBP10.24□□□□□ -0.77
GABRA1-202ENST00000393943 PRAM1Q96QH2 718 aa10.24□□□□□ -0.77
GABRA1-202ENST00000393943 USP26Q9BXU7 913 aa10.24□□□□□ -0.77
GABRA1-202ENST00000393943 LIMCH1Q9UPQ0 1083 aa10.24□□□□□ -0.77
GABRA1-202ENST00000393943 SLC4A2P04920 1241 aa10.24□□□□□ -0.77
GABRA1-202ENST00000393943 CLEC17AQ6ZS10 378 aa10.24□□□□□ -0.77
GABRA1-202ENST00000393943 CREBRFQ8IUR6 639 aa10.24□□□□□ -0.77
GABRA1-202ENST00000393943 PREX2Q70Z35 1606 aa10.24□□□□□ -0.77
GABRA1-202ENST00000393943 CDK19Q9BWU1 502 aa10.24□□□□□ -0.77
GABRA1-202ENST00000393943 SENP3Q9H4L4 574 aaPredicted RBP10.24□□□□□ -0.77
GABRA1-202ENST00000393943 USP25Q9UHP3 1055 aa10.24□□□□□ -0.77
GABRA1-202ENST00000393943 KRT32Q14532 448 aa10.23□□□□□ -0.77
GABRA1-202ENST00000393943 PPP4R3BQ5MIZ7 849 aa10.23□□□□□ -0.77
GABRA1-202ENST00000393943 PIBF1Q8WXW3 757 aa10.23□□□□□ -0.77
GABRA1-202ENST00000393943 DDX58O95786 925 aaKnown RBP10.23□□□□□ -0.77
GABRA1-202ENST00000393943 LMBRD1Q9NUN5 540 aa10.23□□□□□ -0.77
GABRA1-202ENST00000393943 CCDC171Q6TFL3 1326 aa10.23□□□□□ -0.77
GABRA1-202ENST00000393943 ZBTB7BO15156 539 aaPredicted RBP10.23□□□□□ -0.77
GABRA1-202ENST00000393943 SDSP20132 328 aa10.23□□□□□ -0.77
GABRA1-202ENST00000393943 SURF6O75683 361 aaKnown RBP10.22□□□□□ -0.77
GABRA1-202ENST00000393943 G3BP1Q13283 466 aaKnown RBP eCLIP10.22□□□□□ -0.77
GABRA1-202ENST00000393943 LARP1BQ659C4 914 aaKnown RBP10.22□□□□□ -0.77
GABRA1-202ENST00000393943 CPLX2Q6PUV4 134 aaKnown RBP10.22□□□□□ -0.77
GABRA1-202ENST00000393943 ZNF518AQ6AHZ1 1483 aa10.22□□□□□ -0.77
GABRA1-202ENST00000393943 PLEKHM2Q8IWE5 1019 aa10.22□□□□□ -0.77
GABRA1-202ENST00000393943 SPC24Q8NBT2 197 aa10.22□□□□□ -0.77
GABRA1-202ENST00000393943 RBSNQ9H1K0 784 aa10.22□□□□□ -0.77
GABRA1-202ENST00000393943 PDRG1Q9NUG6 133 aa10.22□□□□□ -0.77
GABRA1-202ENST00000393943 C9orf78Q9NZ63 289 aaPredicted RBP10.22□□□□□ -0.77
GABRA1-202ENST00000393943 STX6O43752 255 aa10.22□□□□□ -0.77
GABRA1-202ENST00000393943 AK7Q96M32 723 aa10.22□□□□□ -0.77
GABRA1-202ENST00000393943 CABP1Q9NZU7 370 aa10.22□□□□□ -0.77
GABRA1-202ENST00000393943 CDC42BPAQ5VT25 1732 aa10.22□□□□□ -0.77
GABRA1-202ENST00000393943 SHROOM2Q13796 1616 aa10.22□□□□□ -0.77
GABRA1-202ENST00000393943 GSDMDP57764 484 aa10.21□□□□□ -0.77
GABRA1-202ENST00000393943 UTP14CQ5TAP6 766 aaKnown RBP10.21□□□□□ -0.77
GABRA1-202ENST00000393943 CEP57L1Q8IYX8 460 aa10.21□□□□□ -0.77
GABRA1-202ENST00000393943 KIF18AQ8NI77 898 aa10.21□□□□□ -0.77
GABRA1-202ENST00000393943 SPATA32Q96LK8 384 aa10.21□□□□□ -0.77
GABRA1-202ENST00000393943 RBM27Q9P2N5 1060 aaKnown RBP10.21□□□□□ -0.77
GABRA1-202ENST00000393943 ZSCAN22P10073 491 aaPredicted RBP10.21□□□□□ -0.77
GABRA1-202ENST00000393943 CBX1P83916 185 aa10.21□□□□□ -0.77
GABRA1-202ENST00000393943 KIF1BPQ96EK5 621 aa10.21□□□□□ -0.77
GABRA1-202ENST00000393943 TNNQ9UQP3 1299 aa10.21□□□□□ -0.77
GABRA1-202ENST00000393943 SAMD9LQ8IVG5 1584 aa10.21□□□□□ -0.78
GABRA1-202ENST00000393943 GLRX3O76003 335 aaKnown RBP10.21□□□□□ -0.78
GABRA1-202ENST00000393943 PTPN14Q15678 1187 aa10.21□□□□□ -0.78
GABRA1-202ENST00000393943 PLPPR3Q6T4P5 718 aa10.21□□□□□ -0.78
GABRA1-202ENST00000393943 ERCC4Q92889 916 aaPredicted RBP10.21□□□□□ -0.78
GABRA1-202ENST00000393943 SSH2Q76I76 1423 aa10.21□□□□□ -0.78
GABRA1-202ENST00000393943 ERVK-7P63135 1459 aa10.21□□□□□ -0.78
GABRA1-202ENST00000393943 FAM200AQ8TCP9 573 aa10.21□□□□□ -0.78
GABRA1-202ENST00000393943 MYO5CQ9NQX4 1742 aa10.2□□□□□ -0.78
GABRA1-202ENST00000393943 SOS1Q07889 1333 aaPredicted RBP10.2□□□□□ -0.78
GABRA1-202ENST00000393943 VAMP4O75379 141 aa10.2□□□□□ -0.78
GABRA1-202ENST00000393943 NEXNQ0ZGT2 675 aa10.2□□□□□ -0.78
GABRA1-202ENST00000393943 ESYT1Q9BSJ8 1104 aa10.2□□□□□ -0.78
GABRA1-202ENST00000393943 DMRT2Q9Y5R5 561 aa10.2□□□□□ -0.78
GABRA1-202ENST00000393943 CBFA2T2O43439 604 aa10.2□□□□□ -0.78
GABRA1-202ENST00000393943 MBIPQ9NS73 344 aa10.2□□□□□ -0.78
GABRA1-202ENST00000393943 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.2□□□□□ -0.78
GABRA1-202ENST00000393943 FANCAO15360 1455 aa10.2□□□□□ -0.78
GABRA1-202ENST00000393943 FAM193AP78312 1265 aa10.2□□□□□ -0.78
GABRA1-202ENST00000393943 SETQ01105 290 aaPredicted RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms