RNA–Protein interactions for RNA: ENST00000393572.5

FAM3A-205, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2 BASIC

Gene FAM3A, Length 1,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-205ENST00000393572 RGPD2P0DJD1 1756 aa24.01■■□□□ 1.43
FAM3A-205ENST00000393572 ANKRD26Q9UPS8 1709 aa24■■□□□ 1.43
FAM3A-205ENST00000393572 MEGF6O75095 1541 aa24■■□□□ 1.43
FAM3A-205ENST00000393572 MAP2P11137 1827 aaKnown RBP23.99■■□□□ 1.43
FAM3A-205ENST00000393572 PROM2Q8N271 834 aa23.99■■□□□ 1.43
FAM3A-205ENST00000393572 KNSTRNQ9Y448 316 aa23.99■■□□□ 1.43
FAM3A-205ENST00000393572 STK32BQ9NY57 414 aa23.98■■□□□ 1.43
FAM3A-205ENST00000393572 POLKQ9UBT6 870 aa23.98■■□□□ 1.43
FAM3A-205ENST00000393572 USHBP1Q8N6Y0 703 aa23.97■■□□□ 1.43
FAM3A-205ENST00000393572 PCDH11XQ9BZA7 1347 aa23.97■■□□□ 1.43
FAM3A-205ENST00000393572 PCDH11YQ9BZA8 1340 aa23.97■■□□□ 1.43
FAM3A-205ENST00000393572 HMGB2P26583 209 aaKnown RBP23.95■■□□□ 1.42
FAM3A-205ENST00000393572 BTAF1O14981 1849 aa23.95■■□□□ 1.42
FAM3A-205ENST00000393572 SLC27A3Q5K4L6 730 aa23.94■■□□□ 1.42
FAM3A-205ENST00000393572 SPON1Q9HCB6 807 aa23.94■■□□□ 1.42
FAM3A-205ENST00000393572 NCAPD2Q15021 1401 aa23.93■■□□□ 1.42
FAM3A-205ENST00000393572 PLEKHG2Q9H7P9 1386 aa23.93■■□□□ 1.42
FAM3A-205ENST00000393572 KIF7Q2M1P5 1343 aa23.93■■□□□ 1.42
FAM3A-205ENST00000393572 MORC1Q86VD1 984 aa23.93■■□□□ 1.42
FAM3A-205ENST00000393572 SYTL4Q96C24 671 aaPredicted RBP23.93■■□□□ 1.42
FAM3A-205ENST00000393572 TNNT2P45379 298 aaPredicted RBP23.92■■□□□ 1.42
FAM3A-205ENST00000393572 PRIM1P49642 420 aaKnown RBP23.92■■□□□ 1.42
FAM3A-205ENST00000393572 SLC15A2Q16348 729 aa23.92■■□□□ 1.42
FAM3A-205ENST00000393572 ANO8Q9HCE9 1232 aaPredicted RBP23.92■■□□□ 1.42
FAM3A-205ENST00000393572 SHANK3Q9BYB0 1731 aa23.91■■□□□ 1.42
FAM3A-205ENST00000393572 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.91■■□□□ 1.42
FAM3A-205ENST00000393572 SPG7Q9UQ90 795 aa23.91■■□□□ 1.42
FAM3A-205ENST00000393572 EYA1Q99502 592 aa23.89■■□□□ 1.41
FAM3A-205ENST00000393572 DOT1LQ8TEK3 1739 aa23.87■■□□□ 1.41
FAM3A-205ENST00000393572 EIF4A2Q14240 407 aaKnown RBP23.87■■□□□ 1.41
FAM3A-205ENST00000393572 PPP1R1BQ9UD71 204 aaPredicted RBP23.85■■□□□ 1.41
FAM3A-205ENST00000393572 PKD1L3Q7Z443 1732 aa23.84■■□□□ 1.41
FAM3A-205ENST00000393572 AMER1Q5JTC6 1135 aaPredicted RBP23.84■■□□□ 1.41
FAM3A-205ENST00000393572 CYP27B1O15528 508 aa23.83■■□□□ 1.41
FAM3A-205ENST00000393572 NKX1-1Q15270 411 aaPredicted RBP23.83■■□□□ 1.41
FAM3A-205ENST00000393572 CASZ1Q86V15 1759 aa23.83■■□□□ 1.4
FAM3A-205ENST00000393572 IGSF1Q8N6C5 1336 aa23.83■■□□□ 1.4
FAM3A-205ENST00000393572 PAPPAQ13219 1627 aa23.82■■□□□ 1.4
FAM3A-205ENST00000393572 LRRC4BQ9NT99 713 aa23.82■■□□□ 1.4
FAM3A-205ENST00000393572 IFNL2Q8IZJ0 200 aa23.81■■□□□ 1.4
FAM3A-205ENST00000393572 MTFR1LQ9H019 292 aa23.81■■□□□ 1.4
FAM3A-205ENST00000393572 SMARCC1Q92922 1105 aaPredicted RBP23.8■■□□□ 1.4
FAM3A-205ENST00000393572 CCNL1Q9UK58 526 aaPredicted RBP23.79■■□□□ 1.4
FAM3A-205ENST00000393572 LY75O60449 1722 aa23.79■■□□□ 1.4
FAM3A-205ENST00000393572 PER1O15534 1290 aaPredicted RBP23.78■■□□□ 1.4
FAM3A-205ENST00000393572 AKT1S1Q96B36 256 aa23.78■■□□□ 1.4
FAM3A-205ENST00000393572 NPC1L1Q9UHC9 1359 aa23.78■■□□□ 1.4
FAM3A-205ENST00000393572 HSP90AB1P08238 724 aaKnown RBP23.77■■□□□ 1.4
FAM3A-205ENST00000393572 AMOTQ4VCS5 1084 aa23.77■■□□□ 1.4
FAM3A-205ENST00000393572 MPRIPQ6WCQ1 1025 aa23.77■■□□□ 1.4
FAM3A-205ENST00000393572 SLC16A10Q8TF71 515 aa23.77■■□□□ 1.4
FAM3A-205ENST00000393572 ZBTB7AO95365 584 aa23.76■■□□□ 1.39
FAM3A-205ENST00000393572 PLEKHO1Q53GL0 409 aaPredicted RBP23.76■■□□□ 1.39
FAM3A-205ENST00000393572 PHKG2P15735 406 aa23.75■■□□□ 1.39
FAM3A-205ENST00000393572 ZNF827Q17R98 1081 aa23.75■■□□□ 1.39
FAM3A-205ENST00000393572 TFCP2L1Q9NZI6 479 aa23.75■■□□□ 1.39
FAM3A-205ENST00000393572 QSER1Q2KHR3 1735 aa23.73■■□□□ 1.39
FAM3A-205ENST00000393572 DCAF8L1A6NGE4 600 aa23.73■■□□□ 1.39
FAM3A-205ENST00000393572 PDGFDQ9GZP0 370 aaPredicted RBP23.73■■□□□ 1.39
FAM3A-205ENST00000393572 TMOD3Q9NYL9 352 aa23.73■■□□□ 1.39
FAM3A-205ENST00000393572 PALLDQ8WX93 1383 aa23.73■■□□□ 1.39
FAM3A-205ENST00000393572 ATF5Q9Y2D1 282 aaPredicted RBP23.72■■□□□ 1.39
FAM3A-205ENST00000393572 ITGB4P16144 1822 aa23.71■■□□□ 1.39
FAM3A-205ENST00000393572 IL13P35225 146 aa23.71■■□□□ 1.39
FAM3A-205ENST00000393572 PTGER2P43116 358 aa23.71■■□□□ 1.39
FAM3A-205ENST00000393572 MTHFSP49914 203 aa23.71■■□□□ 1.39
FAM3A-205ENST00000393572 CC2D1BQ5T0F9 858 aaKnown RBP23.7■■□□□ 1.38
FAM3A-205ENST00000393572 PIGBQ92521 554 aa23.7■■□□□ 1.38
FAM3A-205ENST00000393572 DCAF5Q96JK2 942 aa23.7■■□□□ 1.38
FAM3A-205ENST00000393572 KDRP35968 1356 aa23.69■■□□□ 1.38
FAM3A-205ENST00000393572 ERVV-2B6SEH9 535 aa23.69■■□□□ 1.38
FAM3A-205ENST00000393572 TOGARAM1Q9Y4F4 1720 aa23.69■■□□□ 1.38
FAM3A-205ENST00000393572 SULT6B1Q6IMI4 303 aa23.68■■□□□ 1.38
FAM3A-205ENST00000393572 FLAD1Q8NFF5 587 aa23.68■■□□□ 1.38
FAM3A-205ENST00000393572 PNPLA7Q6ZV29 1317 aa23.67■■□□□ 1.38
FAM3A-205ENST00000393572 KCNQ4P56696 695 aa23.67■■□□□ 1.38
FAM3A-205ENST00000393572 C1orf141Q5JVX7 400 aa23.67■■□□□ 1.38
FAM3A-205ENST00000393572 ZNF530Q6P9A1 599 aaPredicted RBP23.67■■□□□ 1.38
FAM3A-205ENST00000393572 POLD1P28340 1107 aa23.66■■□□□ 1.38
FAM3A-205ENST00000393572 SGIP1Q9BQI5 828 aa23.66■■□□□ 1.38
FAM3A-205ENST00000393572 DIAPH1O60610 1272 aaKnown RBP23.65■■□□□ 1.38
FAM3A-205ENST00000393572 ARXQ96QS3 562 aa23.64■■□□□ 1.37
FAM3A-205ENST00000393572 C5P01031 1676 aa23.64■■□□□ 1.37
FAM3A-205ENST00000393572 LOC102724428A0A0B4J2F2 783 aa23.63■■□□□ 1.37
FAM3A-205ENST00000393572 SIK1P57059 783 aa23.63■■□□□ 1.37
FAM3A-205ENST00000393572 AEBP1Q8IUX7 1158 aa23.63■■□□□ 1.37
FAM3A-205ENST00000393572 AK7Q96M32 723 aa23.62■■□□□ 1.37
FAM3A-205ENST00000393572 TAF1LQ8IZX4 1826 aa23.61■■□□□ 1.37
FAM3A-205ENST00000393572 MSH5O43196 834 aa23.6■■□□□ 1.37
FAM3A-205ENST00000393572 CABP4P57796 275 aa23.6■■□□□ 1.37
FAM3A-205ENST00000393572 MAP3K5Q99683 1374 aa23.6■■□□□ 1.37
FAM3A-205ENST00000393572 TUBGCP6Q96RT7 1819 aa23.59■■□□□ 1.37
FAM3A-205ENST00000393572 AKAP4Q5JQC9 854 aa23.59■■□□□ 1.37
FAM3A-205ENST00000393572 ASAP1Q9ULH1 1129 aa23.59■■□□□ 1.37
FAM3A-205ENST00000393572 SYT17Q9BSW7 474 aa23.58■■□□□ 1.37
FAM3A-205ENST00000393572 FHDC1Q9C0D6 1143 aaPredicted RBP23.58■■□□□ 1.37
FAM3A-205ENST00000393572 ATG3Q9NT62 314 aa23.58■■□□□ 1.37
FAM3A-205ENST00000393572 C4BP0C0L5 1744 aa23.57■■□□□ 1.36
FAM3A-205ENST00000393572 ATP6V1AP38606 617 aa23.57■■□□□ 1.36
FAM3A-205ENST00000393572 COL23A1Q86Y22 540 aaPredicted RBP23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms