RNA–Protein interactions for RNA: ENST00000393272.7

NPHP1-203, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 2,752 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-203ENST00000393272 YEATS2Q9ULM3 1422 aa8.66□□□□□ -1.02
NPHP1-203ENST00000393272 KRT222Q8N1A0 295 aa8.66□□□□□ -1.02
NPHP1-203ENST00000393272 IL16Q14005 1332 aa8.65□□□□□ -1.02
NPHP1-203ENST00000393272 USP32Q8NFA0 1604 aa8.65□□□□□ -1.02
NPHP1-203ENST00000393272 U2SURPO15042 1029 aaKnown RBP8.65□□□□□ -1.02
NPHP1-203ENST00000393272 MYO3AQ8NEV4 1616 aa8.65□□□□□ -1.02
NPHP1-203ENST00000393272 SMTNL1A8MU46 457 aa8.65□□□□□ -1.03
NPHP1-203ENST00000393272 TRIM6-TRIM34B2RNG4 842 aa8.65□□□□□ -1.03
NPHP1-203ENST00000393272 REC8O95072 547 aa8.65□□□□□ -1.03
NPHP1-203ENST00000393272 TRIM34Q9BYJ4 488 aa8.65□□□□□ -1.03
NPHP1-203ENST00000393272 ATAD2Q6PL18 1390 aa8.64□□□□□ -1.03
NPHP1-203ENST00000393272 PIK3R4Q99570 1358 aa8.64□□□□□ -1.03
NPHP1-203ENST00000393272 MX1P20591 662 aa8.64□□□□□ -1.03
NPHP1-203ENST00000393272 PTGS1P23219 599 aa8.64□□□□□ -1.03
NPHP1-203ENST00000393272 CUL4AQ13619 759 aa8.64□□□□□ -1.03
NPHP1-203ENST00000393272 CASC1Q6TDU7 716 aa8.64□□□□□ -1.03
NPHP1-203ENST00000393272 CERS3Q8IU89 383 aa8.64□□□□□ -1.03
NPHP1-203ENST00000393272 TRERF1Q96PN7 1200 aa8.64□□□□□ -1.03
NPHP1-203ENST00000393272 ST7Q9NRC1 585 aa8.64□□□□□ -1.03
NPHP1-203ENST00000393272 CALCOCO1Q9P1Z2 691 aa8.64□□□□□ -1.03
NPHP1-203ENST00000393272 PTCH1Q13635 1447 aa8.64□□□□□ -1.03
NPHP1-203ENST00000393272 TRAPPC8Q9Y2L5 1435 aa8.64□□□□□ -1.03
NPHP1-203ENST00000393272 INO80Q9ULG1 1556 aaPredicted RBP8.64□□□□□ -1.03
NPHP1-203ENST00000393272 SPAG9O60271 1321 aaKnown RBP8.64□□□□□ -1.03
NPHP1-203ENST00000393272 UHRF1BP1LA0JNW5 1464 aa8.64□□□□□ -1.03
NPHP1-203ENST00000393272 SBNO2Q9Y2G9 1366 aa8.64□□□□□ -1.03
NPHP1-203ENST00000393272 TPM3P06753 285 aa8.63□□□□□ -1.03
NPHP1-203ENST00000393272 GIMAP6Q6P9H5 292 aa8.63□□□□□ -1.03
NPHP1-203ENST00000393272 FUCA2Q9BTY2 467 aa8.63□□□□□ -1.03
NPHP1-203ENST00000393272 MAP3K4Q9Y6R4 1608 aa8.63□□□□□ -1.03
NPHP1-203ENST00000393272 GOLGA6L6A8MZA4 724 aa8.63□□□□□ -1.03
NPHP1-203ENST00000393272 VGFO15240 615 aaPredicted RBP8.63□□□□□ -1.03
NPHP1-203ENST00000393272 LRMPQ12912 555 aa8.63□□□□□ -1.03
NPHP1-203ENST00000393272 KMT5BQ4FZB7 885 aa8.63□□□□□ -1.03
NPHP1-203ENST00000393272 CCDC112Q8NEF3 446 aa8.63□□□□□ -1.03
NPHP1-203ENST00000393272 CNPY2Q9Y2B0 182 aa8.63□□□□□ -1.03
NPHP1-203ENST00000393272 ABCC4O15439 1325 aa8.63□□□□□ -1.03
NPHP1-203ENST00000393272 ERC2O15083 957 aa8.62□□□□□ -1.03
NPHP1-203ENST00000393272 TNNT1P13805 278 aa8.62□□□□□ -1.03
NPHP1-203ENST00000393272 IRX3P78415 501 aaPredicted RBP8.62□□□□□ -1.03
NPHP1-203ENST00000393272 SRCIN1Q9C0H9 1055 aa8.62□□□□□ -1.03
NPHP1-203ENST00000393272 MYOM2P54296 1465 aa8.62□□□□□ -1.03
NPHP1-203ENST00000393272 ADGRF5Q8IZF2 1346 aa8.62□□□□□ -1.03
NPHP1-203ENST00000393272 BRPF1P55201 1214 aaPredicted RBP8.62□□□□□ -1.03
NPHP1-203ENST00000393272 AEBP1Q8IUX7 1158 aa8.62□□□□□ -1.03
NPHP1-203ENST00000393272 TMEM87AQ8NBN3 555 aa8.62□□□□□ -1.03
NPHP1-203ENST00000393272 INTS4Q96HW7 963 aaKnown RBP8.62□□□□□ -1.03
NPHP1-203ENST00000393272 DCTPP1Q9H773 170 aa8.62□□□□□ -1.03
NPHP1-203ENST00000393272 RPAP1Q9BWH6 1393 aaPredicted RBP8.62□□□□□ -1.03
NPHP1-203ENST00000393272 WDR33Q9C0J8 1336 aaKnown RBP8.62□□□□□ -1.03
NPHP1-203ENST00000393272 ARHGAP5Q13017 1502 aa8.62□□□□□ -1.03
NPHP1-203ENST00000393272 APBB1O00213 710 aa8.61□□□□□ -1.03
NPHP1-203ENST00000393272 MCM2P49736 904 aa8.61□□□□□ -1.03
NPHP1-203ENST00000393272 MRPL50Q8N5N7 158 aaKnown RBP8.61□□□□□ -1.03
NPHP1-203ENST00000393272 IFT57Q9NWB7 429 aa8.61□□□□□ -1.03
NPHP1-203ENST00000393272 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.61□□□□□ -1.03
NPHP1-203ENST00000393272 PALD1Q9ULE6 856 aa8.61□□□□□ -1.03
NPHP1-203ENST00000393272 V9GYY5 206 aaPredicted RBP8.61□□□□□ -1.03
NPHP1-203ENST00000393272 ZC3H13Q5T200 1668 aaKnown RBP8.61□□□□□ -1.03
NPHP1-203ENST00000393272 RBM6P78332 1123 aaKnown RBP8.61□□□□□ -1.03
NPHP1-203ENST00000393272 ZNF397Q8NF99 534 aaPredicted RBP8.61□□□□□ -1.03
NPHP1-203ENST00000393272 FAM53CQ9NYF3 392 aa8.61□□□□□ -1.03
NPHP1-203ENST00000393272 CARMIL2Q6F5E8 1435 aa8.61□□□□□ -1.03
NPHP1-203ENST00000393272 QRICH2Q9H0J4 1663 aa8.61□□□□□ -1.03
NPHP1-203ENST00000393272 UBE2HP62256 183 aa8.61□□□□□ -1.03
NPHP1-203ENST00000393272 TSPYL6Q8N831 410 aa8.61□□□□□ -1.03
NPHP1-203ENST00000393272 ARHGAP45Q92619 1136 aa8.61□□□□□ -1.03
NPHP1-203ENST00000393272 FEZ2Q9UHY8 353 aaPredicted RBP8.61□□□□□ -1.03
NPHP1-203ENST00000393272 COL3A1P02461 1466 aaPredicted RBP8.6□□□□□ -1.03
NPHP1-203ENST00000393272 FBXO38Q6PIJ6 1188 aa8.6□□□□□ -1.03
NPHP1-203ENST00000393272 CCDC186Q7Z3E2 898 aa8.6□□□□□ -1.03
NPHP1-203ENST00000393272 ZBTB9Q96C00 473 aa8.6□□□□□ -1.03
NPHP1-203ENST00000393272 ZFP91Q96JP5 570 aaPredicted RBP8.6□□□□□ -1.03
NPHP1-203ENST00000393272 PAXBP1Q9Y5B6 917 aa8.6□□□□□ -1.03
NPHP1-203ENST00000393272 RTL1A6NKG5 1358 aa8.6□□□□□ -1.03
NPHP1-203ENST00000393272 ELL2O00472 640 aaPredicted RBP8.6□□□□□ -1.03
NPHP1-203ENST00000393272 FIBPO43427 364 aa8.6□□□□□ -1.03
NPHP1-203ENST00000393272 VAMP4O75379 141 aa8.6□□□□□ -1.03
NPHP1-203ENST00000393272 HNRNPH2P55795 449 aaKnown RBP8.6□□□□□ -1.03
NPHP1-203ENST00000393272 ZNF592Q92610 1267 aa8.6□□□□□ -1.03
NPHP1-203ENST00000393272 UPF3BQ9BZI7 483 aaKnown RBP8.6□□□□□ -1.03
NPHP1-203ENST00000393272 NRBP1Q9UHY1 535 aa8.6□□□□□ -1.03
NPHP1-203ENST00000393272 ZNF215Q9UL58 517 aaPredicted RBP8.6□□□□□ -1.03
NPHP1-203ENST00000393272 RGS12O14924 1447 aa8.59□□□□□ -1.03
NPHP1-203ENST00000393272 RAD51AP2Q09MP3 1159 aa8.59□□□□□ -1.03
NPHP1-203ENST00000393272 RGS22Q8NE09 1264 aa8.59□□□□□ -1.03
NPHP1-203ENST00000393272 RTF1Q92541 710 aaKnown RBP8.59□□□□□ -1.03
NPHP1-203ENST00000393272 ZNF428Q96B54 188 aa8.59□□□□□ -1.03
NPHP1-203ENST00000393272 ATP10DQ9P241 1426 aa8.59□□□□□ -1.03
NPHP1-203ENST00000393272 CYP2C19P33261 490 aa8.59□□□□□ -1.03
NPHP1-203ENST00000393272 ELF2Q15723 593 aa8.59□□□□□ -1.03
NPHP1-203ENST00000393272 TSPYL1Q9H0U9 437 aa8.59□□□□□ -1.03
NPHP1-203ENST00000393272 UGGT1Q9NYU2 1555 aa8.58□□□□□ -1.04
NPHP1-203ENST00000393272 ZSCAN25Q6NSZ9 544 aa8.58□□□□□ -1.04
NPHP1-203ENST00000393272 ZNF446Q9NWS9 450 aa8.58□□□□□ -1.04
NPHP1-203ENST00000393272 TRAK1Q9UPV9 953 aa8.58□□□□□ -1.04
NPHP1-203ENST00000393272 ARHGEF40Q8TER5 1519 aa8.58□□□□□ -1.04
NPHP1-203ENST00000393272 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.58□□□□□ -1.04
NPHP1-203ENST00000393272 SRPK2P78362 688 aaKnown RBP8.58□□□□□ -1.04
NPHP1-203ENST00000393272 TPD52L1Q16890 204 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms