RNA–Protein interactions for RNA: ENST00000393164.6

ATP2B1-203, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2B1, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-203ENST00000393164 EXOC5O00471 708 aa4.63□□□□□ -1.67
ATP2B1-203ENST00000393164 APAF1O14727 1248 aa4.63□□□□□ -1.67
ATP2B1-203ENST00000393164 HTATSF1O43719 755 aaKnown RBP4.63□□□□□ -1.67
ATP2B1-203ENST00000393164 NFE2L2Q16236 605 aa4.63□□□□□ -1.67
ATP2B1-203ENST00000393164 AEBP1Q8IUX7 1158 aa4.63□□□□□ -1.67
ATP2B1-203ENST00000393164 USHBP1Q8N6Y0 703 aa4.63□□□□□ -1.67
ATP2B1-203ENST00000393164 PCDH11XQ9BZA7 1347 aa4.63□□□□□ -1.67
ATP2B1-203ENST00000393164 PCDH11YQ9BZA8 1340 aa4.63□□□□□ -1.67
ATP2B1-203ENST00000393164 COL18A1P39060 1754 aa4.63□□□□□ -1.67
ATP2B1-203ENST00000393164 RIPK4P57078 832 aa4.63□□□□□ -1.67
ATP2B1-203ENST00000393164 PDE3BQ13370 1112 aa4.63□□□□□ -1.67
ATP2B1-203ENST00000393164 IFNL2Q8IZJ0 200 aa4.63□□□□□ -1.67
ATP2B1-203ENST00000393164 ZCRB1Q8TBF4 217 aaKnown RBP4.63□□□□□ -1.67
ATP2B1-203ENST00000393164 YTHDC1Q96MU7 727 aaKnown RBP4.63□□□□□ -1.67
ATP2B1-203ENST00000393164 PLEKHF1Q96S99 279 aa4.63□□□□□ -1.67
ATP2B1-203ENST00000393164 QTRT2Q9H974 415 aaKnown RBP4.63□□□□□ -1.67
ATP2B1-203ENST00000393164 NCAPD2Q15021 1401 aa4.63□□□□□ -1.67
ATP2B1-203ENST00000393164 GNAT3A8MTJ3 354 aa4.62□□□□□ -1.67
ATP2B1-203ENST00000393164 TMPOP42166 694 aaKnown RBP4.62□□□□□ -1.67
ATP2B1-203ENST00000393164 NEUROD2Q15784 382 aa4.62□□□□□ -1.67
ATP2B1-203ENST00000393164 DDB1Q16531 1140 aa4.62□□□□□ -1.67
ATP2B1-203ENST00000393164 CCDC27Q2M243 656 aa4.62□□□□□ -1.67
ATP2B1-203ENST00000393164 AKAP4Q5JQC9 854 aa4.62□□□□□ -1.67
ATP2B1-203ENST00000393164 ZNF530Q6P9A1 599 aaPredicted RBP4.62□□□□□ -1.67
ATP2B1-203ENST00000393164 GJD4Q96KN9 370 aaPredicted RBP4.62□□□□□ -1.67
ATP2B1-203ENST00000393164 ZBED9Q6R2W3 1325 aa4.62□□□□□ -1.67
ATP2B1-203ENST00000393164 BCL9LQ86UU0 1499 aa4.62□□□□□ -1.67
ATP2B1-203ENST00000393164 RBM6P78332 1123 aaKnown RBP4.62□□□□□ -1.67
ATP2B1-203ENST00000393164 PLCH1Q4KWH8 1693 aa4.62□□□□□ -1.67
ATP2B1-203ENST00000393164 CENPBP07199 599 aaPredicted RBP4.61□□□□□ -1.67
ATP2B1-203ENST00000393164 OVOS2A0A0G2JMS6 1433 aa4.61□□□□□ -1.67
ATP2B1-203ENST00000393164 MAP3K5Q99683 1374 aa4.61□□□□□ -1.67
ATP2B1-203ENST00000393164 RGPD1P0DJD0 1748 aa4.61□□□□□ -1.67
ATP2B1-203ENST00000393164 RXRBP28702 533 aa4.61□□□□□ -1.67
ATP2B1-203ENST00000393164 TEFQ10587 303 aa4.61□□□□□ -1.67
ATP2B1-203ENST00000393164 MTHFSDQ2M296 383 aaKnown RBP4.61□□□□□ -1.67
ATP2B1-203ENST00000393164 WDR63Q8IWG1 891 aa4.61□□□□□ -1.67
ATP2B1-203ENST00000393164 DCAF5Q96JK2 942 aa4.61□□□□□ -1.67
ATP2B1-203ENST00000393164 PHACTR3Q96KR7 559 aa4.61□□□□□ -1.67
ATP2B1-203ENST00000393164 CHMP4AQ9BY43 222 aa4.61□□□□□ -1.67
ATP2B1-203ENST00000393164 MYH16Q9H6N6 1097 aa4.61□□□□□ -1.67
ATP2B1-203ENST00000393164 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.61□□□□□ -1.67
ATP2B1-203ENST00000393164 ATRNO75882 1429 aa4.61□□□□□ -1.67
ATP2B1-203ENST00000393164 GOLGA2Q08379 1002 aa4.61□□□□□ -1.67
ATP2B1-203ENST00000393164 FAM98CQ17RN3 349 aaKnown RBP4.61□□□□□ -1.67
ATP2B1-203ENST00000393164 RRP7AQ9Y3A4 280 aaKnown RBP4.61□□□□□ -1.67
ATP2B1-203ENST00000393164 SALL2Q9Y467 1007 aaPredicted RBP4.61□□□□□ -1.67
ATP2B1-203ENST00000393164 E9PSI1 815 aa4.6□□□□□ -1.67
ATP2B1-203ENST00000393164 GNAI1P63096 354 aa4.6□□□□□ -1.67
ATP2B1-203ENST00000393164 DDX54Q8TDD1 881 aaKnown RBP4.6□□□□□ -1.67
ATP2B1-203ENST00000393164 BABAM1Q9NWV8 329 aa4.6□□□□□ -1.67
ATP2B1-203ENST00000393164 PCDH10Q9P2E7 1040 aa4.6□□□□□ -1.67
ATP2B1-203ENST00000393164 IL16Q14005 1332 aa4.6□□□□□ -1.67
ATP2B1-203ENST00000393164 NRAPQ86VF7 1730 aa4.6□□□□□ -1.67
ATP2B1-203ENST00000393164 PARP4Q9UKK3 1724 aaKnown RBP4.6□□□□□ -1.67
ATP2B1-203ENST00000393164 RGPD5Q99666 1765 aa4.6□□□□□ -1.67
ATP2B1-203ENST00000393164 MEGF6O75095 1541 aa4.6□□□□□ -1.67
ATP2B1-203ENST00000393164 PHKG2P15735 406 aa4.6□□□□□ -1.67
ATP2B1-203ENST00000393164 HMGB2P26583 209 aaKnown RBP4.6□□□□□ -1.67
ATP2B1-203ENST00000393164 WWC1Q8IX03 1113 aa4.6□□□□□ -1.67
ATP2B1-203ENST00000393164 TNS2Q63HR2 1409 aa4.6□□□□□ -1.67
ATP2B1-203ENST00000393164 ONECUT3O60422 494 aaPredicted RBP4.59□□□□□ -1.67
ATP2B1-203ENST00000393164 DISP2A7MBM2 1401 aa4.59□□□□□ -1.67
ATP2B1-203ENST00000393164 ERVV-2B6SEH9 535 aa4.59□□□□□ -1.67
ATP2B1-203ENST00000393164 CABP4P57796 275 aa4.59□□□□□ -1.67
ATP2B1-203ENST00000393164 SEPT12Q8IYM1 358 aa4.59□□□□□ -1.67
ATP2B1-203ENST00000393164 IFT57Q9NWB7 429 aa4.59□□□□□ -1.67
ATP2B1-203ENST00000393164 RNMTO43148 476 aaKnown RBP4.59□□□□□ -1.68
ATP2B1-203ENST00000393164 NKX1-1Q15270 411 aaPredicted RBP4.59□□□□□ -1.68
ATP2B1-203ENST00000393164 TAF7Q15545 349 aaPredicted RBP4.59□□□□□ -1.68
ATP2B1-203ENST00000393164 CFAP44Q96MT7 982 aa4.59□□□□□ -1.68
ATP2B1-203ENST00000393164 CYP27B1O15528 508 aa4.58□□□□□ -1.68
ATP2B1-203ENST00000393164 MPRIPQ6WCQ1 1025 aa4.58□□□□□ -1.68
ATP2B1-203ENST00000393164 TTC5Q8N0Z6 440 aa4.58□□□□□ -1.68
ATP2B1-203ENST00000393164 TMOD3Q9NYL9 352 aa4.58□□□□□ -1.68
ATP2B1-203ENST00000393164 TRIM35Q9UPQ4 493 aa4.58□□□□□ -1.68
ATP2B1-203ENST00000393164 LAS1LQ9Y4W2 734 aaKnown RBP4.58□□□□□ -1.68
ATP2B1-203ENST00000393164 CT47B1P0C2W7 299 aaPredicted RBP4.58□□□□□ -1.68
ATP2B1-203ENST00000393164 FAM196AQ6ZSG2 479 aa4.58□□□□□ -1.68
ATP2B1-203ENST00000393164 MCM10Q7L590 875 aa4.58□□□□□ -1.68
ATP2B1-203ENST00000393164 KRT27Q7Z3Y8 459 aa4.58□□□□□ -1.68
ATP2B1-203ENST00000393164 SLC52A2Q9HAB3 445 aa4.58□□□□□ -1.68
ATP2B1-203ENST00000393164 TSPYL4Q9UJ04 414 aa4.58□□□□□ -1.68
ATP2B1-203ENST00000393164 CEMIPQ8WUJ3 1361 aa4.57□□□□□ -1.68
ATP2B1-203ENST00000393164 SOS1Q07889 1333 aaPredicted RBP4.57□□□□□ -1.68
ATP2B1-203ENST00000393164 BTBD11A6QL63 1104 aa4.57□□□□□ -1.68
ATP2B1-203ENST00000393164 SYTL4Q96C24 671 aaPredicted RBP4.57□□□□□ -1.68
ATP2B1-203ENST00000393164 RGPD2P0DJD1 1756 aa4.57□□□□□ -1.68
ATP2B1-203ENST00000393164 ZNF521Q96K83 1311 aa4.57□□□□□ -1.68
ATP2B1-203ENST00000393164 IL17REQ8NFR9 667 aa4.57□□□□□ -1.68
ATP2B1-203ENST00000393164 SMARCC1Q92922 1105 aaPredicted RBP4.57□□□□□ -1.68
ATP2B1-203ENST00000393164 ZNF428Q96B54 188 aa4.57□□□□□ -1.68
ATP2B1-203ENST00000393164 PKD1L3Q7Z443 1732 aa4.57□□□□□ -1.68
ATP2B1-203ENST00000393164 SLFN5Q08AF3 891 aa4.57□□□□□ -1.68
ATP2B1-203ENST00000393164 DCTN1Q14203 1278 aa4.57□□□□□ -1.68
ATP2B1-203ENST00000393164 BCL9O00512 1426 aa4.56□□□□□ -1.68
ATP2B1-203ENST00000393164 SENP3-EIF4A1A0A087X0R7 540 aa4.56□□□□□ -1.68
ATP2B1-203ENST00000393164 CHL1O00533 1208 aa4.56□□□□□ -1.68
ATP2B1-203ENST00000393164 MARCH10Q8NA82 808 aaPredicted RBP4.56□□□□□ -1.68
ATP2B1-203ENST00000393164 NFATC2IPQ8NCF5 419 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms