RNA–Protein interactions for RNA: ENST00000393158.6

PDGFD-202, Transcript of platelet derived growth factor D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDGFD, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-202ENST00000393158 WDR63Q8IWG1 891 aa14.27□□□□□ -0.12
PDGFD-202ENST00000393158 BCL9LQ86UU0 1499 aa14.27□□□□□ -0.12
PDGFD-202ENST00000393158 LMOD2Q6P5Q4 547 aa14.27□□□□□ -0.13
PDGFD-202ENST00000393158 RIPK4P57078 832 aa14.26□□□□□ -0.13
PDGFD-202ENST00000393158 GOLGA2Q08379 1002 aa14.26□□□□□ -0.13
PDGFD-202ENST00000393158 AEBP2Q6ZN18 517 aaPredicted RBP14.26□□□□□ -0.13
PDGFD-202ENST00000393158 DCTN1Q14203 1278 aa14.25□□□□□ -0.13
PDGFD-202ENST00000393158 WDR17Q8IZU2 1322 aa14.25□□□□□ -0.13
PDGFD-202ENST00000393158 FANCIQ9NVI1 1328 aa14.25□□□□□ -0.13
PDGFD-202ENST00000393158 IL16Q14005 1332 aa14.24□□□□□ -0.13
PDGFD-202ENST00000393158 PLEKHG5O94827 1062 aa14.24□□□□□ -0.13
PDGFD-202ENST00000393158 NEUROD2Q15784 382 aa14.24□□□□□ -0.13
PDGFD-202ENST00000393158 LTV1Q96GA3 475 aaPredicted RBP14.24□□□□□ -0.13
PDGFD-202ENST00000393158 TOM1O60784 492 aa14.24□□□□□ -0.13
PDGFD-202ENST00000393158 CACNA1FO60840 1977 aa14.24□□□□□ -0.13
PDGFD-202ENST00000393158 IL17REQ8NFR9 667 aa14.23□□□□□ -0.13
PDGFD-202ENST00000393158 DOT1LQ8TEK3 1739 aa14.23□□□□□ -0.13
PDGFD-202ENST00000393158 UBAP1LF5GYI3 381 aa14.22□□□□□ -0.13
PDGFD-202ENST00000393158 PIP4K2BP78356 416 aa14.22□□□□□ -0.13
PDGFD-202ENST00000393158 SUPT16HQ9Y5B9 1047 aaKnown RBP14.22□□□□□ -0.13
PDGFD-202ENST00000393158 SBF2Q86WG5 1849 aa14.22□□□□□ -0.13
PDGFD-202ENST00000393158 TSR2Q969E8 191 aaKnown RBP14.22□□□□□ -0.13
PDGFD-202ENST00000393158 E9PSI1 815 aa14.21□□□□□ -0.13
PDGFD-202ENST00000393158 LARP1Q6PKG0 1096 aaKnown RBP14.21□□□□□ -0.13
PDGFD-202ENST00000393158 LAMB4A4D0S4 1761 aa14.21□□□□□ -0.13
PDGFD-202ENST00000393158 MCM10Q7L590 875 aa14.21□□□□□ -0.13
PDGFD-202ENST00000393158 MAP3K5Q99683 1374 aa14.21□□□□□ -0.14
PDGFD-202ENST00000393158 BRWD3Q6RI45 1802 aa14.2□□□□□ -0.14
PDGFD-202ENST00000393158 HEG1Q9ULI3 1381 aa14.19□□□□□ -0.14
PDGFD-202ENST00000393158 MBIPQ9NS73 344 aa14.19□□□□□ -0.14
PDGFD-202ENST00000393158 CICQ96RK0 1608 aaPredicted RBP14.19□□□□□ -0.14
PDGFD-202ENST00000393158 MAPK8IP3Q9UPT6 1336 aa14.18□□□□□ -0.14
PDGFD-202ENST00000393158 CHL1O00533 1208 aa14.18□□□□□ -0.14
PDGFD-202ENST00000393158 CYP27B1O15528 508 aa14.18□□□□□ -0.14
PDGFD-202ENST00000393158 JCADQ9P266 1359 aa14.18□□□□□ -0.14
PDGFD-202ENST00000393158 HSPA1LP34931 641 aa14.18□□□□□ -0.14
PDGFD-202ENST00000393158 LGR6Q9HBX8 967 aa14.18□□□□□ -0.14
PDGFD-202ENST00000393158 KCPQ6ZWJ8 1503 aa14.18□□□□□ -0.14
PDGFD-202ENST00000393158 TSPYL6Q8N831 410 aa14.18□□□□□ -0.14
PDGFD-202ENST00000393158 RGS12O14924 1447 aa14.17□□□□□ -0.14
PDGFD-202ENST00000393158 PNNQ9H307 717 aaKnown RBP14.17□□□□□ -0.14
PDGFD-202ENST00000393158 PRDM11Q9NQV5 511 aa14.17□□□□□ -0.14
PDGFD-202ENST00000393158 CFAP44Q96MT7 982 aa14.17□□□□□ -0.14
PDGFD-202ENST00000393158 CARD10Q9BWT7 1032 aa14.17□□□□□ -0.14
PDGFD-202ENST00000393158 IFT57Q9NWB7 429 aa14.16□□□□□ -0.14
PDGFD-202ENST00000393158 BTG4Q9NY30 223 aa14.16□□□□□ -0.14
PDGFD-202ENST00000393158 TJP1Q07157 1748 aa14.15□□□□□ -0.14
PDGFD-202ENST00000393158 ZBTB7CA1YPR0 619 aa14.15□□□□□ -0.14
PDGFD-202ENST00000393158 KRT24Q2M2I5 525 aa14.15□□□□□ -0.14
PDGFD-202ENST00000393158 C20orf194Q5TEA3 1177 aa14.15□□□□□ -0.14
PDGFD-202ENST00000393158 RCAN3Q9UKA8 241 aa14.15□□□□□ -0.14
PDGFD-202ENST00000393158 BCAR3O75815 825 aa14.15□□□□□ -0.14
PDGFD-202ENST00000393158 HTATSF1O43719 755 aaKnown RBP14.15□□□□□ -0.14
PDGFD-202ENST00000393158 RARSP54136 660 aaKnown RBP14.14□□□□□ -0.15
PDGFD-202ENST00000393158 C8orf58Q8NAV2 365 aa14.14□□□□□ -0.15
PDGFD-202ENST00000393158 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.14□□□□□ -0.15
PDGFD-202ENST00000393158 FNBP4Q8N3X1 1017 aaPredicted RBP14.13□□□□□ -0.15
PDGFD-202ENST00000393158 RREB1Q92766 1687 aa14.13□□□□□ -0.15
PDGFD-202ENST00000393158 GNAT3A8MTJ3 354 aa14.13□□□□□ -0.15
PDGFD-202ENST00000393158 PHKG2P15735 406 aa14.13□□□□□ -0.15
PDGFD-202ENST00000393158 EXOSC9Q06265 439 aaKnown RBP14.13□□□□□ -0.15
PDGFD-202ENST00000393158 SPATA31A1Q5TZJ5 1347 aa14.13□□□□□ -0.15
PDGFD-202ENST00000393158 RRP1P56182 461 aaKnown RBP14.13□□□□□ -0.15
PDGFD-202ENST00000393158 VAMP4O75379 141 aa14.12□□□□□ -0.15
PDGFD-202ENST00000393158 AKAP4Q5JQC9 854 aa14.12□□□□□ -0.15
PDGFD-202ENST00000393158 TNNQ9UQP3 1299 aa14.12□□□□□ -0.15
PDGFD-202ENST00000393158 ZNF831Q5JPB2 1677 aa14.12□□□□□ -0.15
PDGFD-202ENST00000393158 COL5A3P25940 1745 aaPredicted RBP14.12□□□□□ -0.15
PDGFD-202ENST00000393158 NUP188Q5SRE5 1749 aa14.12□□□□□ -0.15
PDGFD-202ENST00000393158 GAS2L2Q8NHY3 880 aa14.12□□□□□ -0.15
PDGFD-202ENST00000393158 TNS2Q63HR2 1409 aa14.12□□□□□ -0.15
PDGFD-202ENST00000393158 NKX1-1Q15270 411 aaPredicted RBP14.12□□□□□ -0.15
PDGFD-202ENST00000393158 MIS18AQ9NYP9 233 aa14.12□□□□□ -0.15
PDGFD-202ENST00000393158 PLIN1O60240 522 aa14.11□□□□□ -0.15
PDGFD-202ENST00000393158 SPATA31A5Q5VU36 1347 aa14.11□□□□□ -0.15
PDGFD-202ENST00000393158 SPATA31A7Q8IWB4 1347 aa14.11□□□□□ -0.15
PDGFD-202ENST00000393158 SPATA31A6Q5VVP1 1343 aa14.1□□□□□ -0.15
PDGFD-202ENST00000393158 NLRP2Q9NX02 1062 aa14.1□□□□□ -0.15
PDGFD-202ENST00000393158 KCNQ3O43525 872 aa14.1□□□□□ -0.15
PDGFD-202ENST00000393158 RNMTO43148 476 aaKnown RBP14.1□□□□□ -0.15
PDGFD-202ENST00000393158 BRPF1P55201 1214 aaPredicted RBP14.1□□□□□ -0.15
PDGFD-202ENST00000393158 NHSQ6T4R5 1651 aa14.09□□□□□ -0.15
PDGFD-202ENST00000393158 ATRNO75882 1429 aa14.09□□□□□ -0.15
PDGFD-202ENST00000393158 IRX6P78412 446 aaPredicted RBP14.09□□□□□ -0.15
PDGFD-202ENST00000393158 AMOTQ4VCS5 1084 aa14.09□□□□□ -0.15
PDGFD-202ENST00000393158 MPRIPQ6WCQ1 1025 aa14.09□□□□□ -0.15
PDGFD-202ENST00000393158 LY75O60449 1722 aa14.09□□□□□ -0.15
PDGFD-202ENST00000393158 ADAMTS2O95450 1211 aa14.08□□□□□ -0.16
PDGFD-202ENST00000393158 RLBP1P12271 317 aa14.08□□□□□ -0.16
PDGFD-202ENST00000393158 SSH1Q8WYL5 1049 aa14.08□□□□□ -0.16
PDGFD-202ENST00000393158 BTAF1O14981 1849 aa14.08□□□□□ -0.16
PDGFD-202ENST00000393158 TAF1LQ8IZX4 1826 aa14.07□□□□□ -0.16
PDGFD-202ENST00000393158 ZNF530Q6P9A1 599 aaPredicted RBP14.07□□□□□ -0.16
PDGFD-202ENST00000393158 MYH16Q9H6N6 1097 aa14.07□□□□□ -0.16
PDGFD-202ENST00000393158 STRN4Q9NRL3 753 aa14.07□□□□□ -0.16
PDGFD-202ENST00000393158 ARFGEF2Q9Y6D5 1785 aa14.07□□□□□ -0.16
PDGFD-202ENST00000393158 GNAI1P63096 354 aa14.06□□□□□ -0.16
PDGFD-202ENST00000393158 LMOD3Q0VAK6 560 aa14.06□□□□□ -0.16
PDGFD-202ENST00000393158 MYH14Q7Z406 1995 aaKnown RBP14.06□□□□□ -0.16
PDGFD-202ENST00000393158 TOM1L2Q6ZVM7 507 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms