RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 IL17REQ8NFR9 667 aa19.23■□□□□ 0.67
MKS1-202ENST00000393119 NCOA3Q9Y6Q9 1424 aa19.23■□□□□ 0.67
MKS1-202ENST00000393119 KIF24Q5T7B8 1368 aa19.23■□□□□ 0.67
MKS1-202ENST00000393119 RTL1A6NKG5 1358 aa19.22■□□□□ 0.67
MKS1-202ENST00000393119 SLIT3O75094 1523 aa19.22■□□□□ 0.67
MKS1-202ENST00000393119 CHL1O00533 1208 aa19.22■□□□□ 0.67
MKS1-202ENST00000393119 ZKSCAN2Q63HK3 967 aa19.22■□□□□ 0.67
MKS1-202ENST00000393119 RTF1Q92541 710 aaKnown RBP19.22■□□□□ 0.67
MKS1-202ENST00000393119 CRB1P82279 1406 aa19.22■□□□□ 0.67
MKS1-202ENST00000393119 CALD1Q05682 793 aaKnown RBP19.21■□□□□ 0.67
MKS1-202ENST00000393119 RGPD2P0DJD1 1756 aa19.21■□□□□ 0.67
MKS1-202ENST00000393119 SPATA31A3Q5VYP0 1347 aa19.21■□□□□ 0.67
MKS1-202ENST00000393119 LGR6Q9HBX8 967 aa19.2■□□□□ 0.66
MKS1-202ENST00000393119 PXDNQ92626 1479 aa19.2■□□□□ 0.66
MKS1-202ENST00000393119 KIF1AQ12756 1690 aa19.2■□□□□ 0.66
MKS1-202ENST00000393119 DZIP1LQ8IYY4 767 aaKnown RBP19.2■□□□□ 0.66
MKS1-202ENST00000393119 CT47B1P0C2W7 299 aaPredicted RBP19.19■□□□□ 0.66
MKS1-202ENST00000393119 GAS2L2Q8NHY3 880 aa19.19■□□□□ 0.66
MKS1-202ENST00000393119 PCDHB15Q9Y5E8 787 aa19.19■□□□□ 0.66
MKS1-202ENST00000393119 KDM2BQ8NHM5 1336 aa19.19■□□□□ 0.66
MKS1-202ENST00000393119 GNAT3A8MTJ3 354 aa19.19■□□□□ 0.66
MKS1-202ENST00000393119 ATF7IPQ6VMQ6 1270 aa19.19■□□□□ 0.66
MKS1-202ENST00000393119 FTSJ3Q8IY81 847 aaKnown RBP19.19■□□□□ 0.66
MKS1-202ENST00000393119 MRPL50Q8N5N7 158 aaKnown RBP19.19■□□□□ 0.66
MKS1-202ENST00000393119 ALS2Q96Q42 1657 aa19.19■□□□□ 0.66
MKS1-202ENST00000393119 TMEM57Q8N5G2 664 aa19.18■□□□□ 0.66
MKS1-202ENST00000393119 TSPYL4Q9UJ04 414 aa19.18■□□□□ 0.66
MKS1-202ENST00000393119 TNS3Q68CZ2 1445 aa19.17■□□□□ 0.66
MKS1-202ENST00000393119 ITPRIPQ8IWB1 547 aa19.17■□□□□ 0.66
MKS1-202ENST00000393119 NECTIN2Q92692 538 aa19.17■□□□□ 0.66
MKS1-202ENST00000393119 KIAA0232Q92628 1395 aa19.16■□□□□ 0.66
MKS1-202ENST00000393119 MPRIPQ6WCQ1 1025 aa19.16■□□□□ 0.66
MKS1-202ENST00000393119 NLRP2Q9NX02 1062 aa19.16■□□□□ 0.66
MKS1-202ENST00000393119 ERBB3P21860 1342 aa19.15■□□□□ 0.66
MKS1-202ENST00000393119 MVPQ14764 893 aaKnown RBP19.15■□□□□ 0.66
MKS1-202ENST00000393119 ALDH1L2Q3SY69 923 aa19.14■□□□□ 0.66
MKS1-202ENST00000393119 RGPD5Q99666 1765 aa19.14■□□□□ 0.65
MKS1-202ENST00000393119 MAP3K5Q99683 1374 aa19.14■□□□□ 0.65
MKS1-202ENST00000393119 ZNF530Q6P9A1 599 aaPredicted RBP19.13■□□□□ 0.65
MKS1-202ENST00000393119 KCNQ3O43525 872 aa19.13■□□□□ 0.65
MKS1-202ENST00000393119 CSB-PGBD3P0DP91 1061 aa19.12■□□□□ 0.65
MKS1-202ENST00000393119 SOS2Q07890 1332 aaPredicted RBP19.12■□□□□ 0.65
MKS1-202ENST00000393119 CENPQQ7L2Z9 268 aaPredicted RBP19.1■□□□□ 0.65
MKS1-202ENST00000393119 G2E3Q7L622 706 aa19.1■□□□□ 0.65
MKS1-202ENST00000393119 KIF16BQ96L93 1317 aa19.09■□□□□ 0.65
MKS1-202ENST00000393119 RGS3P49796 1198 aa19.09■□□□□ 0.65
MKS1-202ENST00000393119 C1orf115Q9H7X2 142 aa19.09■□□□□ 0.65
MKS1-202ENST00000393119 HAP1P54257 671 aaPredicted RBP19.08■□□□□ 0.65
MKS1-202ENST00000393119 SLC4A2P04920 1241 aa19.07■□□□□ 0.64
MKS1-202ENST00000393119 PLEKHO1Q53GL0 409 aaPredicted RBP19.07■□□□□ 0.64
MKS1-202ENST00000393119 PHRF1Q9P1Y6 1649 aaKnown RBP19.07■□□□□ 0.64
MKS1-202ENST00000393119 IPO8O15397 1037 aaKnown RBP19.07■□□□□ 0.64
MKS1-202ENST00000393119 TAF7Q15545 349 aaPredicted RBP19.07■□□□□ 0.64
MKS1-202ENST00000393119 PRDM11Q9NQV5 511 aa19.07■□□□□ 0.64
MKS1-202ENST00000393119 HTATSF1O43719 755 aaKnown RBP19.06■□□□□ 0.64
MKS1-202ENST00000393119 BRPF1P55201 1214 aaPredicted RBP19.05■□□□□ 0.64
MKS1-202ENST00000393119 AKAP4Q5JQC9 854 aa19.05■□□□□ 0.64
MKS1-202ENST00000393119 ZNF428Q96B54 188 aa19.05■□□□□ 0.64
MKS1-202ENST00000393119 F6X3S4 739 aa19.04■□□□□ 0.64
MKS1-202ENST00000393119 RNMTO43148 476 aaKnown RBP19.04■□□□□ 0.64
MKS1-202ENST00000393119 STRN4Q9NRL3 753 aa19.04■□□□□ 0.64
MKS1-202ENST00000393119 ZBTB40Q9NUA8 1239 aa19.04■□□□□ 0.64
MKS1-202ENST00000393119 CEMIPQ8WUJ3 1361 aa19.04■□□□□ 0.64
MKS1-202ENST00000393119 DDX19BQ9UMR2 479 aa19.03■□□□□ 0.64
MKS1-202ENST00000393119 MEGF6O75095 1541 aa19.03■□□□□ 0.64
MKS1-202ENST00000393119 COL18A1P39060 1754 aa19.03■□□□□ 0.64
MKS1-202ENST00000393119 NCAPD2Q15021 1401 aa19.03■□□□□ 0.64
MKS1-202ENST00000393119 PRAMEF22A3QJZ6 481 aa19.03■□□□□ 0.64
MKS1-202ENST00000393119 C1orf141Q5JVX7 400 aa19.03■□□□□ 0.64
MKS1-202ENST00000393119 RAPGEF4Q8WZA2 1011 aa19.03■□□□□ 0.64
MKS1-202ENST00000393119 ZBTB7BO15156 539 aaPredicted RBP19.02■□□□□ 0.64
MKS1-202ENST00000393119 EIF2S2P20042 333 aaKnown RBP19.01■□□□□ 0.63
MKS1-202ENST00000393119 USP35Q9P2H5 1018 aa19.01■□□□□ 0.63
MKS1-202ENST00000393119 AMOTQ4VCS5 1084 aa19.01■□□□□ 0.63
MKS1-202ENST00000393119 ERICH6Q7L0X2 663 aa19.01■□□□□ 0.63
MKS1-202ENST00000393119 CRYBG1Q9Y4K1 1723 aa19.01■□□□□ 0.63
MKS1-202ENST00000393119 CAMTA1Q9Y6Y1 1673 aa19.01■□□□□ 0.63
MKS1-202ENST00000393119 BTBD11A6QL63 1104 aa19■□□□□ 0.63
MKS1-202ENST00000393119 ANXA1P04083 346 aa19■□□□□ 0.63
MKS1-202ENST00000393119 TEFQ10587 303 aa19■□□□□ 0.63
MKS1-202ENST00000393119 ABCC4O15439 1325 aa19■□□□□ 0.63
MKS1-202ENST00000393119 MS4A1P11836 297 aa19■□□□□ 0.63
MKS1-202ENST00000393119 TOM1L2Q6ZVM7 507 aa19■□□□□ 0.63
MKS1-202ENST00000393119 ARHGAP45Q92619 1136 aa19■□□□□ 0.63
MKS1-202ENST00000393119 LRRC37A3O60309 1634 aa19■□□□□ 0.63
MKS1-202ENST00000393119 SLC39A6Q13433 755 aa18.99■□□□□ 0.63
MKS1-202ENST00000393119 LARP1Q6PKG0 1096 aaKnown RBP18.99■□□□□ 0.63
MKS1-202ENST00000393119 RGS12O14924 1447 aa18.99■□□□□ 0.63
MKS1-202ENST00000393119 TATP17735 454 aaPredicted RBP18.99■□□□□ 0.63
MKS1-202ENST00000393119 CPDO75976 1380 aa18.99■□□□□ 0.63
MKS1-202ENST00000393119 CYP27B1O15528 508 aa18.98■□□□□ 0.63
MKS1-202ENST00000393119 EIF4A1P60842 406 aaKnown RBP18.98■□□□□ 0.63
MKS1-202ENST00000393119 PIP4K2BP78356 416 aa18.98■□□□□ 0.63
MKS1-202ENST00000393119 SLC4A10Q6U841 1118 aa18.98■□□□□ 0.63
MKS1-202ENST00000393119 PHAXQ9H814 394 aaKnown RBP18.98■□□□□ 0.63
MKS1-202ENST00000393119 PDE4AP27815 886 aa18.97■□□□□ 0.63
MKS1-202ENST00000393119 PHKG2P15735 406 aa18.97■□□□□ 0.63
MKS1-202ENST00000393119 PDZRN3Q9UPQ7 1066 aa18.97■□□□□ 0.63
MKS1-202ENST00000393119 API5Q9BZZ5 524 aaKnown RBP18.96■□□□□ 0.63
MKS1-202ENST00000393119 FAM208AQ9UK61 1670 aaKnown RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms