RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 LAS1LQ9Y4W2 734 aaKnown RBP25.46■■□□□ 1.67
CSNK1D-203ENST00000392334 RTL1A6NKG5 1358 aa25.46■■□□□ 1.67
CSNK1D-203ENST00000392334 DCTN1Q14203 1278 aa25.44■■□□□ 1.66
CSNK1D-203ENST00000392334 IGSF1Q8N6C5 1336 aa25.44■■□□□ 1.66
CSNK1D-203ENST00000392334 MYH16Q9H6N6 1097 aa25.44■■□□□ 1.66
CSNK1D-203ENST00000392334 BCAR3O75815 825 aa25.43■■□□□ 1.66
CSNK1D-203ENST00000392334 C8orf34Q49A92 452 aa25.43■■□□□ 1.66
CSNK1D-203ENST00000392334 RGPD1P0DJD0 1748 aa25.42■■□□□ 1.66
CSNK1D-203ENST00000392334 COL18A1P39060 1754 aa25.4■■□□□ 1.66
CSNK1D-203ENST00000392334 NBPF6Q5VWK0 638 aa25.4■■□□□ 1.66
CSNK1D-203ENST00000392334 NBPF4Q96M43 638 aa25.4■■□□□ 1.66
CSNK1D-203ENST00000392334 CPDO75976 1380 aa25.4■■□□□ 1.66
CSNK1D-203ENST00000392334 RGPD2P0DJD1 1756 aa25.39■■□□□ 1.66
CSNK1D-203ENST00000392334 PRDM11Q9NQV5 511 aa25.39■■□□□ 1.66
CSNK1D-203ENST00000392334 MTHFSDQ2M296 383 aaKnown RBP25.39■■□□□ 1.65
CSNK1D-203ENST00000392334 VIRMAQ69YN4 1812 aaKnown RBP25.38■■□□□ 1.65
CSNK1D-203ENST00000392334 COL22A1Q8NFW1 1626 aaPredicted RBP25.38■■□□□ 1.65
CSNK1D-203ENST00000392334 EXOSC9Q06265 439 aaKnown RBP25.37■■□□□ 1.65
CSNK1D-203ENST00000392334 PDE3AQ14432 1141 aa25.37■■□□□ 1.65
CSNK1D-203ENST00000392334 ANKRD24Q8TF21 1146 aa25.37■■□□□ 1.65
CSNK1D-203ENST00000392334 KDRP35968 1356 aa25.37■■□□□ 1.65
CSNK1D-203ENST00000392334 MCM10Q7L590 875 aa25.37■■□□□ 1.65
CSNK1D-203ENST00000392334 BCL2L13Q9BXK5 485 aa25.36■■□□□ 1.65
CSNK1D-203ENST00000392334 IL16Q14005 1332 aa25.35■■□□□ 1.65
CSNK1D-203ENST00000392334 ERBB3P21860 1342 aa25.34■■□□□ 1.65
CSNK1D-203ENST00000392334 LMOD3Q0VAK6 560 aa25.34■■□□□ 1.65
CSNK1D-203ENST00000392334 NUTM2BA6NNL0 878 aaPredicted RBP25.32■■□□□ 1.64
CSNK1D-203ENST00000392334 NUTM2EB1AL46 878 aaPredicted RBP25.32■■□□□ 1.64
CSNK1D-203ENST00000392334 HSPA1LP34931 641 aa25.32■■□□□ 1.64
CSNK1D-203ENST00000392334 NUTM2AQ8IVF1 878 aaPredicted RBP25.32■■□□□ 1.64
CSNK1D-203ENST00000392334 DLG5Q8TDM6 1919 aa25.32■■□□□ 1.64
CSNK1D-203ENST00000392334 CAMTA1Q9Y6Y1 1673 aa25.32■■□□□ 1.64
CSNK1D-203ENST00000392334 ADAMTS2O95450 1211 aa25.31■■□□□ 1.64
CSNK1D-203ENST00000392334 RARSP54136 660 aaKnown RBP25.31■■□□□ 1.64
CSNK1D-203ENST00000392334 FRAT1Q92837 279 aaPredicted RBP25.3■■□□□ 1.64
CSNK1D-203ENST00000392334 LMO7Q8WWI1 1683 aa25.3■■□□□ 1.64
CSNK1D-203ENST00000392334 CALD1Q05682 793 aaKnown RBP25.29■■□□□ 1.64
CSNK1D-203ENST00000392334 MBIPQ9NS73 344 aa25.29■■□□□ 1.64
CSNK1D-203ENST00000392334 AAMPQ13685 434 aa25.28■■□□□ 1.64
CSNK1D-203ENST00000392334 CSB-PGBD3P0DP91 1061 aa25.27■■□□□ 1.64
CSNK1D-203ENST00000392334 GNAI1P63096 354 aa25.27■■□□□ 1.64
CSNK1D-203ENST00000392334 IFT57Q9NWB7 429 aa25.27■■□□□ 1.64
CSNK1D-203ENST00000392334 DAXXQ9UER7 740 aaPredicted RBP25.27■■□□□ 1.64
CSNK1D-203ENST00000392334 ABCC6O95255 1503 aa25.27■■□□□ 1.64
CSNK1D-203ENST00000392334 ELL2O00472 640 aaPredicted RBP25.27■■□□□ 1.64
CSNK1D-203ENST00000392334 GAS2L2Q8NHY3 880 aa25.27■■□□□ 1.64
CSNK1D-203ENST00000392334 RTF1Q92541 710 aaKnown RBP25.27■■□□□ 1.64
CSNK1D-203ENST00000392334 NLRP2Q9NX02 1062 aa25.27■■□□□ 1.64
CSNK1D-203ENST00000392334 CANXP27824 592 aaKnown RBP25.26■■□□□ 1.63
CSNK1D-203ENST00000392334 CFAP44Q96MT7 982 aa25.26■■□□□ 1.63
CSNK1D-203ENST00000392334 JCADQ9P266 1359 aa25.26■■□□□ 1.63
CSNK1D-203ENST00000392334 RGS3P49796 1198 aa25.25■■□□□ 1.63
CSNK1D-203ENST00000392334 NFKBIBQ15653 356 aa25.25■■□□□ 1.63
CSNK1D-203ENST00000392334 ZNF853P0CG23 659 aa25.25■■□□□ 1.63
CSNK1D-203ENST00000392334 STRN4Q9NRL3 753 aa25.25■■□□□ 1.63
CSNK1D-203ENST00000392334 BTG4Q9NY30 223 aa25.25■■□□□ 1.63
CSNK1D-203ENST00000392334 COL5A2P05997 1499 aaPredicted RBP25.24■■□□□ 1.63
CSNK1D-203ENST00000392334 CLUAP1Q96AJ1 413 aa25.24■■□□□ 1.63
CSNK1D-203ENST00000392334 MIS18AQ9NYP9 233 aa25.24■■□□□ 1.63
CSNK1D-203ENST00000392334 TSPYL6Q8N831 410 aa25.24■■□□□ 1.63
CSNK1D-203ENST00000392334 IGHDP01880 384 aa25.23■■□□□ 1.63
CSNK1D-203ENST00000392334 GNAT3A8MTJ3 354 aa25.22■■□□□ 1.63
CSNK1D-203ENST00000392334 COL14A1Q05707 1796 aaKnown RBP25.21■■□□□ 1.63
CSNK1D-203ENST00000392334 WDR17Q8IZU2 1322 aa25.2■■□□□ 1.63
CSNK1D-203ENST00000392334 EVA1CP58658 441 aa25.2■■□□□ 1.63
CSNK1D-203ENST00000392334 SSH1Q8WYL5 1049 aa25.2■■□□□ 1.63
CSNK1D-203ENST00000392334 SMC4Q9NTJ3 1288 aa25.2■■□□□ 1.63
CSNK1D-203ENST00000392334 TNNQ9UQP3 1299 aa25.2■■□□□ 1.63
CSNK1D-203ENST00000392334 LARP1Q6PKG0 1096 aaKnown RBP25.2■■□□□ 1.62
CSNK1D-203ENST00000392334 NCAPD2Q15021 1401 aa25.19■■□□□ 1.62
CSNK1D-203ENST00000392334 TOM1L2Q6ZVM7 507 aa25.19■■□□□ 1.62
CSNK1D-203ENST00000392334 C8orf58Q8NAV2 365 aa25.19■■□□□ 1.62
CSNK1D-203ENST00000392334 SLC4A3P48751 1232 aa25.19■■□□□ 1.62
CSNK1D-203ENST00000392334 KRT24Q2M2I5 525 aa25.19■■□□□ 1.62
CSNK1D-203ENST00000392334 PANK1Q8TE04 598 aa25.19■■□□□ 1.62
CSNK1D-203ENST00000392334 FAM208AQ9UK61 1670 aaKnown RBP25.18■■□□□ 1.62
CSNK1D-203ENST00000392334 CT47B1P0C2W7 299 aaPredicted RBP25.18■■□□□ 1.62
CSNK1D-203ENST00000392334 GSE1Q14687 1217 aa25.17■■□□□ 1.62
CSNK1D-203ENST00000392334 IL17REQ8NFR9 667 aa25.17■■□□□ 1.62
CSNK1D-203ENST00000392334 CRB1P82279 1406 aa25.17■■□□□ 1.62
CSNK1D-203ENST00000392334 CHL1O00533 1208 aa25.16■■□□□ 1.62
CSNK1D-203ENST00000392334 MAP3K5Q99683 1374 aa25.16■■□□□ 1.62
CSNK1D-203ENST00000392334 PLCH1Q4KWH8 1693 aa25.16■■□□□ 1.62
CSNK1D-203ENST00000392334 VAMP4O75379 141 aa25.15■■□□□ 1.62
CSNK1D-203ENST00000392334 TWISTNBQ3B726 338 aaPredicted RBP25.15■■□□□ 1.62
CSNK1D-203ENST00000392334 ZNF530Q6P9A1 599 aaPredicted RBP25.15■■□□□ 1.62
CSNK1D-203ENST00000392334 COG6Q9Y2V7 657 aa25.15■■□□□ 1.62
CSNK1D-203ENST00000392334 LRP6O75581 1613 aa25.15■■□□□ 1.62
CSNK1D-203ENST00000392334 PLEKHO1Q53GL0 409 aaPredicted RBP25.14■■□□□ 1.62
CSNK1D-203ENST00000392334 LGR6Q9HBX8 967 aa25.13■■□□□ 1.61
CSNK1D-203ENST00000392334 TSPYL4Q9UJ04 414 aa25.13■■□□□ 1.61
CSNK1D-203ENST00000392334 SPATA31A6Q5VVP1 1343 aa25.13■■□□□ 1.61
CSNK1D-203ENST00000392334 C8orf37Q96NL8 207 aa25.13■■□□□ 1.61
CSNK1D-203ENST00000392334 HTATSF1O43719 755 aaKnown RBP25.12■■□□□ 1.61
CSNK1D-203ENST00000392334 RLBP1P12271 317 aa25.12■■□□□ 1.61
CSNK1D-203ENST00000392334 MPRIPQ6WCQ1 1025 aa25.12■■□□□ 1.61
CSNK1D-203ENST00000392334 NOB1Q9ULX3 412 aaKnown RBP25.12■■□□□ 1.61
CSNK1D-203ENST00000392334 MEGF6O75095 1541 aa25.12■■□□□ 1.61
CSNK1D-203ENST00000392334 RAPGEF4Q8WZA2 1011 aa25.11■■□□□ 1.61
CSNK1D-203ENST00000392334 CARD10Q9BWT7 1032 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms