RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 OVOS2A0A0G2JMS6 1433 aa19.92■□□□□ 0.78
SUMO1-203ENST00000392246 KRT27Q7Z3Y8 459 aa19.92■□□□□ 0.78
SUMO1-203ENST00000392246 PLEKHG2Q9H7P9 1386 aa19.91■□□□□ 0.78
SUMO1-203ENST00000392246 ZCRB1Q8TBF4 217 aaKnown RBP19.91■□□□□ 0.78
SUMO1-203ENST00000392246 TNS2Q63HR2 1409 aa19.9■□□□□ 0.78
SUMO1-203ENST00000392246 FCHSD2O94868 740 aa19.89■□□□□ 0.77
SUMO1-203ENST00000392246 CCDC184Q52MB2 194 aa19.89■□□□□ 0.77
SUMO1-203ENST00000392246 ILDR2Q71H61 639 aa19.89■□□□□ 0.77
SUMO1-203ENST00000392246 MRS2Q9HD23 443 aa19.89■□□□□ 0.77
SUMO1-203ENST00000392246 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.89■□□□□ 0.77
SUMO1-203ENST00000392246 WDR43Q15061 677 aaKnown RBP eCLIP19.88■□□□□ 0.77
SUMO1-203ENST00000392246 SPG7Q9UQ90 795 aa19.88■□□□□ 0.77
SUMO1-203ENST00000392246 AMOTQ4VCS5 1084 aa19.87■□□□□ 0.77
SUMO1-203ENST00000392246 PLEKHO1Q53GL0 409 aaPredicted RBP19.87■□□□□ 0.77
SUMO1-203ENST00000392246 RSPH6AQ9H0K4 717 aa19.87■□□□□ 0.77
SUMO1-203ENST00000392246 PKD1L3Q7Z443 1732 aa19.87■□□□□ 0.77
SUMO1-203ENST00000392246 DDX54Q8TDD1 881 aaKnown RBP19.86■□□□□ 0.77
SUMO1-203ENST00000392246 PNNQ9H307 717 aaKnown RBP19.86■□□□□ 0.77
SUMO1-203ENST00000392246 SHANK3Q9BYB0 1731 aa19.85■□□□□ 0.77
SUMO1-203ENST00000392246 PRKAR2BP31323 418 aa19.85■□□□□ 0.77
SUMO1-203ENST00000392246 MARCH10Q8NA82 808 aaPredicted RBP19.85■□□□□ 0.77
SUMO1-203ENST00000392246 PCDH11XQ9BZA7 1347 aa19.85■□□□□ 0.77
SUMO1-203ENST00000392246 PCDH11YQ9BZA8 1340 aa19.85■□□□□ 0.77
SUMO1-203ENST00000392246 CCER2I3L3R5 266 aa19.83■□□□□ 0.77
SUMO1-203ENST00000392246 MIER1Q8N108 512 aa19.83■□□□□ 0.77
SUMO1-203ENST00000392246 ADAMTS8Q9UP79 889 aa19.83■□□□□ 0.77
SUMO1-203ENST00000392246 NEFMP07197 916 aa19.82■□□□□ 0.76
SUMO1-203ENST00000392246 FAM182BQ5T319 152 aa19.82■□□□□ 0.76
SUMO1-203ENST00000392246 FAM196AQ6ZSG2 479 aa19.82■□□□□ 0.76
SUMO1-203ENST00000392246 PNISRQ8TF01 805 aaKnown RBP19.82■□□□□ 0.76
SUMO1-203ENST00000392246 CYP27B1O15528 508 aa19.81■□□□□ 0.76
SUMO1-203ENST00000392246 IFNL2Q8IZJ0 200 aa19.81■□□□□ 0.76
SUMO1-203ENST00000392246 ZNF530Q6P9A1 599 aaPredicted RBP19.81■□□□□ 0.76
SUMO1-203ENST00000392246 PLEKHF1Q96S99 279 aa19.81■□□□□ 0.76
SUMO1-203ENST00000392246 KAT6BQ8WYB5 2073 aa19.8■□□□□ 0.76
SUMO1-203ENST00000392246 MTHFSDQ2M296 383 aaKnown RBP19.8■□□□□ 0.76
SUMO1-203ENST00000392246 PHACTR3Q96KR7 559 aa19.8■□□□□ 0.76
SUMO1-203ENST00000392246 PHKG2P15735 406 aa19.79■□□□□ 0.76
SUMO1-203ENST00000392246 C1orf141Q5JVX7 400 aa19.79■□□□□ 0.76
SUMO1-203ENST00000392246 GAS2L2Q8NHY3 880 aa19.79■□□□□ 0.76
SUMO1-203ENST00000392246 BCL9O00512 1426 aa19.79■□□□□ 0.76
SUMO1-203ENST00000392246 MAPK8IP3Q9UPT6 1336 aa19.78■□□□□ 0.76
SUMO1-203ENST00000392246 HSP90AB1P08238 724 aaKnown RBP19.77■□□□□ 0.76
SUMO1-203ENST00000392246 NKX1-1Q15270 411 aaPredicted RBP19.77■□□□□ 0.76
SUMO1-203ENST00000392246 AKAP4Q5JQC9 854 aa19.76■□□□□ 0.75
SUMO1-203ENST00000392246 RUNDC1Q96C34 613 aa19.76■□□□□ 0.75
SUMO1-203ENST00000392246 SBF2Q86WG5 1849 aa19.75■□□□□ 0.75
SUMO1-203ENST00000392246 CCDC146Q8IYE0 955 aa19.75■□□□□ 0.75
SUMO1-203ENST00000392246 EP400Q96L91 3159 aa19.75■□□□□ 0.75
SUMO1-203ENST00000392246 FAM9BQ8IZU0 186 aa19.74■□□□□ 0.75
SUMO1-203ENST00000392246 DCAF5Q96JK2 942 aa19.73■□□□□ 0.75
SUMO1-203ENST00000392246 GNAT3A8MTJ3 354 aa19.72■□□□□ 0.75
SUMO1-203ENST00000392246 ACSBG1Q96GR2 724 aa19.72■□□□□ 0.75
SUMO1-203ENST00000392246 TRIM37O94972 964 aa19.71■□□□□ 0.75
SUMO1-203ENST00000392246 NFE2L2Q16236 605 aa19.71■□□□□ 0.75
SUMO1-203ENST00000392246 MAP3K5Q99683 1374 aa19.71■□□□□ 0.75
SUMO1-203ENST00000392246 DOT1LQ8TEK3 1739 aa19.71■□□□□ 0.75
SUMO1-203ENST00000392246 MPRIPQ6WCQ1 1025 aa19.71■□□□□ 0.75
SUMO1-203ENST00000392246 DLG5Q8TDM6 1919 aa19.7■□□□□ 0.74
SUMO1-203ENST00000392246 VIRMAQ69YN4 1812 aaKnown RBP19.7■□□□□ 0.74
SUMO1-203ENST00000392246 PRIM1P49642 420 aaKnown RBP19.7■□□□□ 0.74
SUMO1-203ENST00000392246 CCDC125Q86Z20 511 aa19.7■□□□□ 0.74
SUMO1-203ENST00000392246 BCL11BQ9C0K0 894 aaPredicted RBP19.7■□□□□ 0.74
SUMO1-203ENST00000392246 SCN11AQ9UI33 1791 aa19.69■□□□□ 0.74
SUMO1-203ENST00000392246 NHSQ6T4R5 1651 aa19.69■□□□□ 0.74
SUMO1-203ENST00000392246 TMPOP42166 694 aaKnown RBP19.69■□□□□ 0.74
SUMO1-203ENST00000392246 SYTL4Q96C24 671 aaPredicted RBP19.69■□□□□ 0.74
SUMO1-203ENST00000392246 ITGB4P16144 1822 aa19.68■□□□□ 0.74
SUMO1-203ENST00000392246 TOGARAM1Q9Y4F4 1720 aa19.68■□□□□ 0.74
SUMO1-203ENST00000392246 KDM6AO15550 1401 aaPredicted RBP19.68■□□□□ 0.74
SUMO1-203ENST00000392246 ERVV-2B6SEH9 535 aa19.68■□□□□ 0.74
SUMO1-203ENST00000392246 RNMTO43148 476 aaKnown RBP19.68■□□□□ 0.74
SUMO1-203ENST00000392246 KCNQ2O43526 872 aa19.68■□□□□ 0.74
SUMO1-203ENST00000392246 HTATSF1O43719 755 aaKnown RBP19.68■□□□□ 0.74
SUMO1-203ENST00000392246 RTF1Q92541 710 aaKnown RBP19.68■□□□□ 0.74
SUMO1-203ENST00000392246 UPF1Q92900 1129 aaKnown RBP eCLIP19.68■□□□□ 0.74
SUMO1-203ENST00000392246 RIPK4P57078 832 aa19.67■□□□□ 0.74
SUMO1-203ENST00000392246 SF3B2Q13435 895 aaKnown RBP19.67■□□□□ 0.74
SUMO1-203ENST00000392246 LGR6Q9HBX8 967 aa19.67■□□□□ 0.74
SUMO1-203ENST00000392246 ADAMTS7Q9UKP4 1686 aa19.66■□□□□ 0.74
SUMO1-203ENST00000392246 APAF1O14727 1248 aa19.66■□□□□ 0.74
SUMO1-203ENST00000392246 PTF1AQ7RTS3 328 aa19.66■□□□□ 0.74
SUMO1-203ENST00000392246 IL17REQ8NFR9 667 aa19.66■□□□□ 0.74
SUMO1-203ENST00000392246 CABP4P57796 275 aa19.65■□□□□ 0.74
SUMO1-203ENST00000392246 NEUROD2Q15784 382 aa19.65■□□□□ 0.74
SUMO1-203ENST00000392246 TMOD3Q9NYL9 352 aa19.65■□□□□ 0.74
SUMO1-203ENST00000392246 RRP7AQ9Y3A4 280 aaKnown RBP19.65■□□□□ 0.74
SUMO1-203ENST00000392246 TNS1Q9HBL0 1735 aaKnown RBP19.65■□□□□ 0.74
SUMO1-203ENST00000392246 LMOD3Q0VAK6 560 aa19.64■□□□□ 0.73
SUMO1-203ENST00000392246 BTAF1O14981 1849 aa19.64■□□□□ 0.73
SUMO1-203ENST00000392246 APBA3O96018 575 aa19.63■□□□□ 0.73
SUMO1-203ENST00000392246 PIGBQ92521 554 aa19.63■□□□□ 0.73
SUMO1-203ENST00000392246 SLC52A2Q9HAB3 445 aa19.63■□□□□ 0.73
SUMO1-203ENST00000392246 CEMIPQ8WUJ3 1361 aa19.63■□□□□ 0.73
SUMO1-203ENST00000392246 MCM10Q7L590 875 aa19.62■□□□□ 0.73
SUMO1-203ENST00000392246 NFATC2IPQ8NCF5 419 aa19.62■□□□□ 0.73
SUMO1-203ENST00000392246 SOCS7O14512 581 aa19.61■□□□□ 0.73
SUMO1-203ENST00000392246 TEFQ10587 303 aa19.61■□□□□ 0.73
SUMO1-203ENST00000392246 DCTN1Q14203 1278 aa19.61■□□□□ 0.73
SUMO1-203ENST00000392246 MRC1P22897 1456 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 208 ms