RNA–Protein interactions for RNA: ENST00000391942.6

ERCC2-202, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 1,488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-202ENST00000391942 HNRNPUQ00839 825 aaKnown RBP eCLIP22.51■■□□□ 1.19
ERCC2-202ENST00000391942 ZNF772Q68DY9 489 aaPredicted RBP22.51■■□□□ 1.19
ERCC2-202ENST00000391942 GJD4Q96KN9 370 aaPredicted RBP22.51■■□□□ 1.19
ERCC2-202ENST00000391942 PHF23Q9BUL5 403 aaPredicted RBP22.51■■□□□ 1.19
ERCC2-202ENST00000391942 GLI3P10071 1580 aa22.5■■□□□ 1.19
ERCC2-202ENST00000391942 FAM98CQ17RN3 349 aaKnown RBP22.5■■□□□ 1.19
ERCC2-202ENST00000391942 MTHFSDQ2M296 383 aaKnown RBP22.5■■□□□ 1.19
ERCC2-202ENST00000391942 THRAP3Q9Y2W1 955 aaKnown RBP22.5■■□□□ 1.19
ERCC2-202ENST00000391942 OVOS2A0A0G2JMS6 1433 aa22.5■■□□□ 1.19
ERCC2-202ENST00000391942 DISP2A7MBM2 1401 aa22.49■■□□□ 1.19
ERCC2-202ENST00000391942 PLEKHO1Q53GL0 409 aaPredicted RBP22.48■■□□□ 1.19
ERCC2-202ENST00000391942 TMPOP42166 694 aaKnown RBP22.47■■□□□ 1.19
ERCC2-202ENST00000391942 NFE2L2Q16236 605 aa22.47■■□□□ 1.19
ERCC2-202ENST00000391942 BARGINQ6ZT62 677 aa22.47■■□□□ 1.19
ERCC2-202ENST00000391942 A0A0G2JS52 829 aa22.47■■□□□ 1.19
ERCC2-202ENST00000391942 MYT1Q01538 1121 aa22.47■■□□□ 1.19
ERCC2-202ENST00000391942 RGS17Q9UGC6 210 aaPredicted RBP22.47■■□□□ 1.19
ERCC2-202ENST00000391942 PKD1L3Q7Z443 1732 aa22.46■■□□□ 1.19
ERCC2-202ENST00000391942 AMOTQ4VCS5 1084 aa22.46■■□□□ 1.19
ERCC2-202ENST00000391942 ZNF530Q6P9A1 599 aaPredicted RBP22.46■■□□□ 1.19
ERCC2-202ENST00000391942 SPG7Q9UQ90 795 aa22.46■■□□□ 1.19
ERCC2-202ENST00000391942 DLG5Q8TDM6 1919 aa22.45■■□□□ 1.19
ERCC2-202ENST00000391942 RIPK4P57078 832 aa22.45■■□□□ 1.18
ERCC2-202ENST00000391942 GAS2L2Q8NHY3 880 aa22.45■■□□□ 1.18
ERCC2-202ENST00000391942 ZCRB1Q8TBF4 217 aaKnown RBP22.45■■□□□ 1.18
ERCC2-202ENST00000391942 CDCA7Q9BWT1 371 aaPredicted RBP22.44■■□□□ 1.18
ERCC2-202ENST00000391942 SHANK3Q9BYB0 1731 aa22.43■■□□□ 1.18
ERCC2-202ENST00000391942 LRRC37A3O60309 1634 aa22.43■■□□□ 1.18
ERCC2-202ENST00000391942 DDX54Q8TDD1 881 aaKnown RBP22.42■■□□□ 1.18
ERCC2-202ENST00000391942 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.42■■□□□ 1.18
ERCC2-202ENST00000391942 EXOC5O00471 708 aa22.41■■□□□ 1.18
ERCC2-202ENST00000391942 C1orf141Q5JVX7 400 aa22.41■■□□□ 1.18
ERCC2-202ENST00000391942 THSD7AQ9UPZ6 1657 aa22.41■■□□□ 1.18
ERCC2-202ENST00000391942 DDB1Q16531 1140 aa22.41■■□□□ 1.18
ERCC2-202ENST00000391942 POTEAQ6S8J7 498 aa22.41■■□□□ 1.18
ERCC2-202ENST00000391942 PLEKHG2Q9H7P9 1386 aa22.4■■□□□ 1.18
ERCC2-202ENST00000391942 PCDH11XQ9BZA7 1347 aa22.4■■□□□ 1.18
ERCC2-202ENST00000391942 PCDH11YQ9BZA8 1340 aa22.4■■□□□ 1.18
ERCC2-202ENST00000391942 TNS2Q63HR2 1409 aa22.4■■□□□ 1.18
ERCC2-202ENST00000391942 CYP27B1O15528 508 aa22.4■■□□□ 1.18
ERCC2-202ENST00000391942 RBM6P78332 1123 aaKnown RBP22.4■■□□□ 1.18
ERCC2-202ENST00000391942 MAP3K5Q99683 1374 aa22.4■■□□□ 1.18
ERCC2-202ENST00000391942 PHKG2P15735 406 aa22.39■■□□□ 1.17
ERCC2-202ENST00000391942 DCTN1Q14203 1278 aa22.39■■□□□ 1.17
ERCC2-202ENST00000391942 TRIM35Q9UPQ4 493 aa22.39■■□□□ 1.17
ERCC2-202ENST00000391942 GNAT3A8MTJ3 354 aa22.38■■□□□ 1.17
ERCC2-202ENST00000391942 AKAP4Q5JQC9 854 aa22.38■■□□□ 1.17
ERCC2-202ENST00000391942 IFNL2Q8IZJ0 200 aa22.38■■□□□ 1.17
ERCC2-202ENST00000391942 RXRBP28702 533 aa22.37■■□□□ 1.17
ERCC2-202ENST00000391942 MCM10Q7L590 875 aa22.37■■□□□ 1.17
ERCC2-202ENST00000391942 SEPT12Q8IYM1 358 aa22.37■■□□□ 1.17
ERCC2-202ENST00000391942 THUMPD2Q9BTF0 503 aaKnown RBP22.37■■□□□ 1.17
ERCC2-202ENST00000391942 ONECUT3O60422 494 aaPredicted RBP22.36■■□□□ 1.17
ERCC2-202ENST00000391942 MPRIPQ6WCQ1 1025 aa22.36■■□□□ 1.17
ERCC2-202ENST00000391942 RTF1Q92541 710 aaKnown RBP22.36■■□□□ 1.17
ERCC2-202ENST00000391942 LMOD3Q0VAK6 560 aa22.35■■□□□ 1.17
ERCC2-202ENST00000391942 WWC1Q8IX03 1113 aa22.35■■□□□ 1.17
ERCC2-202ENST00000391942 LGR6Q9HBX8 967 aa22.34■■□□□ 1.17
ERCC2-202ENST00000391942 CCDC27Q2M243 656 aa22.34■■□□□ 1.17
ERCC2-202ENST00000391942 NGEFQ8N5V2 710 aa22.34■■□□□ 1.17
ERCC2-202ENST00000391942 ZBED9Q6R2W3 1325 aa22.33■■□□□ 1.17
ERCC2-202ENST00000391942 VIRMAQ69YN4 1812 aaKnown RBP22.33■■□□□ 1.17
ERCC2-202ENST00000391942 PDE3BQ13370 1112 aa22.33■■□□□ 1.16
ERCC2-202ENST00000391942 MARCH10Q8NA82 808 aaPredicted RBP22.33■■□□□ 1.16
ERCC2-202ENST00000391942 IL17REQ8NFR9 667 aa22.33■■□□□ 1.16
ERCC2-202ENST00000391942 KDM6AO15550 1401 aaPredicted RBP22.31■■□□□ 1.16
ERCC2-202ENST00000391942 RNMTO43148 476 aaKnown RBP22.31■■□□□ 1.16
ERCC2-202ENST00000391942 HTATSF1O43719 755 aaKnown RBP22.31■■□□□ 1.16
ERCC2-202ENST00000391942 NCBP3Q53F19 620 aaKnown RBP22.31■■□□□ 1.16
ERCC2-202ENST00000391942 ZNF521Q96K83 1311 aa22.31■■□□□ 1.16
ERCC2-202ENST00000391942 BRWD3Q6RI45 1802 aa22.31■■□□□ 1.16
ERCC2-202ENST00000391942 HSP90AB1P08238 724 aaKnown RBP22.3■■□□□ 1.16
ERCC2-202ENST00000391942 FAM182BQ5T319 152 aa22.3■■□□□ 1.16
ERCC2-202ENST00000391942 SCN11AQ9UI33 1791 aa22.3■■□□□ 1.16
ERCC2-202ENST00000391942 DCAF5Q96JK2 942 aa22.29■■□□□ 1.16
ERCC2-202ENST00000391942 RGS12O14924 1447 aa22.29■■□□□ 1.16
ERCC2-202ENST00000391942 NKX1-1Q15270 411 aaPredicted RBP22.28■■□□□ 1.16
ERCC2-202ENST00000391942 ADAMTS7Q9UKP4 1686 aa22.28■■□□□ 1.16
ERCC2-202ENST00000391942 LAS1LQ9Y4W2 734 aaKnown RBP22.28■■□□□ 1.16
ERCC2-202ENST00000391942 TOGARAM1Q9Y4F4 1720 aa22.27■■□□□ 1.16
ERCC2-202ENST00000391942 CEMIPQ8WUJ3 1361 aa22.27■■□□□ 1.16
ERCC2-202ENST00000391942 WDR63Q8IWG1 891 aa22.26■■□□□ 1.15
ERCC2-202ENST00000391942 CDCA7LQ96GN5 454 aa22.26■■□□□ 1.15
ERCC2-202ENST00000391942 GOLGA2Q08379 1002 aa22.25■■□□□ 1.15
ERCC2-202ENST00000391942 TEFQ10587 303 aa22.25■■□□□ 1.15
ERCC2-202ENST00000391942 KRT27Q7Z3Y8 459 aa22.25■■□□□ 1.15
ERCC2-202ENST00000391942 SPINK5Q9NQ38 1064 aaPredicted RBP22.25■■□□□ 1.15
ERCC2-202ENST00000391942 DOT1LQ8TEK3 1739 aa22.25■■□□□ 1.15
ERCC2-202ENST00000391942 CALD1Q05682 793 aaKnown RBP22.24■■□□□ 1.15
ERCC2-202ENST00000391942 ACSBG1Q96GR2 724 aa22.24■■□□□ 1.15
ERCC2-202ENST00000391942 MIS18AQ9NYP9 233 aa22.23■■□□□ 1.15
ERCC2-202ENST00000391942 CABP4P57796 275 aa22.22■■□□□ 1.15
ERCC2-202ENST00000391942 SLC52A2Q9HAB3 445 aa22.22■■□□□ 1.15
ERCC2-202ENST00000391942 KAT6BQ8WYB5 2073 aa22.22■■□□□ 1.15
ERCC2-202ENST00000391942 NFATC2IPQ8NCF5 419 aa22.22■■□□□ 1.15
ERCC2-202ENST00000391942 SYTL4Q96C24 671 aaPredicted RBP22.22■■□□□ 1.15
ERCC2-202ENST00000391942 SIPA1L3O60292 1781 aaPredicted RBP22.21■■□□□ 1.15
ERCC2-202ENST00000391942 MRC1P22897 1456 aa22.21■■□□□ 1.15
ERCC2-202ENST00000391942 ERVV-2B6SEH9 535 aa22.21■■□□□ 1.15
ERCC2-202ENST00000391942 ITGB4P16144 1822 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms