RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 CDC42BPGQ6DT37 1551 aa22.17■■□□□ 1.14
ERCC2-201ENST00000391941 KNDC1Q76NI1 1749 aa22.17■■□□□ 1.14
ERCC2-201ENST00000391941 MSNP26038 577 aaKnown RBP22.17■■□□□ 1.14
ERCC2-201ENST00000391941 RABEP1Q15276 862 aa22.17■■□□□ 1.14
ERCC2-201ENST00000391941 ANP32BQ92688 251 aaKnown RBP22.17■■□□□ 1.14
ERCC2-201ENST00000391941 PKNOX2Q96KN3 472 aa22.17■■□□□ 1.14
ERCC2-201ENST00000391941 CFAP44Q96MT7 982 aa22.17■■□□□ 1.14
ERCC2-201ENST00000391941 GDPD2Q9HCC8 539 aa22.17■■□□□ 1.14
ERCC2-201ENST00000391941 ARHGEF40Q8TER5 1519 aa22.16■■□□□ 1.14
ERCC2-201ENST00000391941 PPP1R9BQ96SB3 815 aa22.16■■□□□ 1.14
ERCC2-201ENST00000391941 TMEM63CQ9P1W3 806 aa22.16■■□□□ 1.14
ERCC2-201ENST00000391941 CEP85Q6P2H3 762 aa22.16■■□□□ 1.14
ERCC2-201ENST00000391941 NECTIN2Q92692 538 aa22.16■■□□□ 1.14
ERCC2-201ENST00000391941 MSH6P52701 1360 aa22.15■■□□□ 1.14
ERCC2-201ENST00000391941 MYO5BQ9ULV0 1848 aa22.15■■□□□ 1.14
ERCC2-201ENST00000391941 ARHGAP31Q2M1Z3 1444 aa22.15■■□□□ 1.14
ERCC2-201ENST00000391941 EXOC6BQ9Y2D4 811 aa22.14■■□□□ 1.14
ERCC2-201ENST00000391941 SULT6B1Q6IMI4 303 aa22.14■■□□□ 1.13
ERCC2-201ENST00000391941 API5Q9BZZ5 524 aaKnown RBP22.14■■□□□ 1.13
ERCC2-201ENST00000391941 FAM13BQ9NYF5 915 aa22.14■■□□□ 1.13
ERCC2-201ENST00000391941 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.14■■□□□ 1.13
ERCC2-201ENST00000391941 CLTCQ00610 1675 aaKnown RBP22.13■■□□□ 1.13
ERCC2-201ENST00000391941 CLEC17AQ6ZS10 378 aa22.13■■□□□ 1.13
ERCC2-201ENST00000391941 G2E3Q7L622 706 aa22.13■■□□□ 1.13
ERCC2-201ENST00000391941 TXNDC2Q86VQ3 553 aa22.13■■□□□ 1.13
ERCC2-201ENST00000391941 INTS3Q68E01 1043 aaKnown RBP22.13■■□□□ 1.13
ERCC2-201ENST00000391941 JARID2Q92833 1246 aaPredicted RBP22.13■■□□□ 1.13
ERCC2-201ENST00000391941 CYP2E1P05181 493 aaPredicted RBP22.13■■□□□ 1.13
ERCC2-201ENST00000391941 NEK4P51957 841 aa22.13■■□□□ 1.13
ERCC2-201ENST00000391941 GLIPR1L2Q4G1C9 344 aa22.12■■□□□ 1.13
ERCC2-201ENST00000391941 FOXO3O43524 673 aa22.12■■□□□ 1.13
ERCC2-201ENST00000391941 MLECQ14165 292 aa22.12■■□□□ 1.13
ERCC2-201ENST00000391941 LARP6Q9BRS8 491 aaKnown RBP22.12■■□□□ 1.13
ERCC2-201ENST00000391941 PALD1Q9ULE6 856 aa22.12■■□□□ 1.13
ERCC2-201ENST00000391941 KIF20BQ96Q89 1820 aa22.12■■□□□ 1.13
ERCC2-201ENST00000391941 ANKRD44Q8N8A2 993 aa22.11■■□□□ 1.13
ERCC2-201ENST00000391941 YEATS2Q9ULM3 1422 aa22.1■■□□□ 1.13
ERCC2-201ENST00000391941 RIMS2Q9UQ26 1411 aa22.1■■□□□ 1.13
ERCC2-201ENST00000391941 SLC4A2P04920 1241 aa22.1■■□□□ 1.13
ERCC2-201ENST00000391941 MAP2P11137 1827 aaKnown RBP22.09■■□□□ 1.13
ERCC2-201ENST00000391941 TMEM131LA2VDJ0 1609 aa22.09■■□□□ 1.13
ERCC2-201ENST00000391941 NUCB2P80303 420 aa22.09■■□□□ 1.13
ERCC2-201ENST00000391941 UPF3BQ9BZI7 483 aaKnown RBP22.09■■□□□ 1.13
ERCC2-201ENST00000391941 ATP10DQ9P241 1426 aa22.09■■□□□ 1.13
ERCC2-201ENST00000391941 DIP2CQ9Y2E4 1556 aa22.09■■□□□ 1.13
ERCC2-201ENST00000391941 ZNF445P59923 1031 aa22.09■■□□□ 1.13
ERCC2-201ENST00000391941 ALKQ9UM73 1620 aa22.07■■□□□ 1.12
ERCC2-201ENST00000391941 ST18O60284 1047 aa22.07■■□□□ 1.12
ERCC2-201ENST00000391941 OFD1O75665 1012 aa22.07■■□□□ 1.12
ERCC2-201ENST00000391941 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.07■■□□□ 1.12
ERCC2-201ENST00000391941 LMOD3Q0VAK6 560 aa22.06■■□□□ 1.12
ERCC2-201ENST00000391941 RILPL2Q969X0 211 aa22.06■■□□□ 1.12
ERCC2-201ENST00000391941 COG3Q96JB2 828 aa22.06■■□□□ 1.12
ERCC2-201ENST00000391941 TMX3Q96JJ7 454 aa22.06■■□□□ 1.12
ERCC2-201ENST00000391941 RTL1A6NKG5 1358 aa22.06■■□□□ 1.12
ERCC2-201ENST00000391941 MAP4K4O95819 1239 aaPredicted RBP22.05■■□□□ 1.12
ERCC2-201ENST00000391941 IBTKQ9P2D0 1353 aaPredicted RBP22.05■■□□□ 1.12
ERCC2-201ENST00000391941 ZNF830Q96NB3 372 aaPredicted RBP22.05■■□□□ 1.12
ERCC2-201ENST00000391941 HSP90AB2PQ58FF8 381 aa22.05■■□□□ 1.12
ERCC2-201ENST00000391941 REREQ9P2R6 1566 aa22.04■■□□□ 1.12
ERCC2-201ENST00000391941 RGS12O14924 1447 aa22.04■■□□□ 1.12
ERCC2-201ENST00000391941 GADD45BO75293 160 aaPredicted RBP22.04■■□□□ 1.12
ERCC2-201ENST00000391941 TSC1Q92574 1164 aa22.04■■□□□ 1.12
ERCC2-201ENST00000391941 IL25Q9H293 177 aa22.04■■□□□ 1.12
ERCC2-201ENST00000391941 EIF4A2Q14240 407 aaKnown RBP22.03■■□□□ 1.12
ERCC2-201ENST00000391941 ATP7BP35670 1465 aa22.03■■□□□ 1.12
ERCC2-201ENST00000391941 TRIM6-TRIM34B2RNG4 842 aa22.03■■□□□ 1.12
ERCC2-201ENST00000391941 TPM2P07951 284 aa22.03■■□□□ 1.12
ERCC2-201ENST00000391941 UNC5CLQ8IV45 518 aa22.03■■□□□ 1.12
ERCC2-201ENST00000391941 ERC2O15083 957 aa22.02■■□□□ 1.12
ERCC2-201ENST00000391941 ANO2Q9NQ90 1003 aa22.02■■□□□ 1.12
ERCC2-201ENST00000391941 PDE1AP54750 535 aa22.02■■□□□ 1.12
ERCC2-201ENST00000391941 CASC1Q6TDU7 716 aa22.02■■□□□ 1.12
ERCC2-201ENST00000391941 C17orf53Q8N3J3 647 aaPredicted RBP22.02■■□□□ 1.12
ERCC2-201ENST00000391941 NUDT16Q96DE0 195 aaKnown RBP22.01■■□□□ 1.11
ERCC2-201ENST00000391941 KIF24Q5T7B8 1368 aa22.01■■□□□ 1.11
ERCC2-201ENST00000391941 PREX1Q8TCU6 1659 aa22.01■■□□□ 1.11
ERCC2-201ENST00000391941 CDK12Q9NYV4 1490 aaPredicted RBP22■■□□□ 1.11
ERCC2-201ENST00000391941 UQCRHLA0A096LP55 91 aa22■■□□□ 1.11
ERCC2-201ENST00000391941 FAM177BA6PVY3 158 aa22■■□□□ 1.11
ERCC2-201ENST00000391941 UQCRHP07919 91 aa22■■□□□ 1.11
ERCC2-201ENST00000391941 DLG5Q8TDM6 1919 aa22■■□□□ 1.11
ERCC2-201ENST00000391941 CPS1P31327 1500 aa22■■□□□ 1.11
ERCC2-201ENST00000391941 RPAP2Q8IXW5 612 aaPredicted RBP22■■□□□ 1.11
ERCC2-201ENST00000391941 PNMA6EA0A0J9YXQ4 647 aa21.99■■□□□ 1.11
ERCC2-201ENST00000391941 NOL7Q9UMY1 257 aaKnown RBP21.99■■□□□ 1.11
ERCC2-201ENST00000391941 WASLO00401 505 aaPredicted RBP21.99■■□□□ 1.11
ERCC2-201ENST00000391941 REC8O95072 547 aa21.99■■□□□ 1.11
ERCC2-201ENST00000391941 IL1RAPL2Q9NP60 686 aa21.99■■□□□ 1.11
ERCC2-201ENST00000391941 EDC4Q6P2E9 1401 aaKnown RBP21.99■■□□□ 1.11
ERCC2-201ENST00000391941 NEO1Q92859 1461 aa21.98■■□□□ 1.11
ERCC2-201ENST00000391941 LRSAM1Q6UWE0 723 aa21.98■■□□□ 1.11
ERCC2-201ENST00000391941 CPSF1Q10570 1443 aaKnown RBP21.98■■□□□ 1.11
ERCC2-201ENST00000391941 PDLIM2Q96JY6 352 aa21.97■■□□□ 1.11
ERCC2-201ENST00000391941 CWC22Q9HCG8 908 aaKnown RBP21.97■■□□□ 1.11
ERCC2-201ENST00000391941 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.97■■□□□ 1.11
ERCC2-201ENST00000391941 CHL1O00533 1208 aa21.96■■□□□ 1.11
ERCC2-201ENST00000391941 PTMAP06454 111 aaKnown RBP21.96■■□□□ 1.11
ERCC2-201ENST00000391941 AATKQ6ZMQ8 1374 aa21.96■■□□□ 1.11
ERCC2-201ENST00000391941 PDCL3Q9H2J4 239 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms