RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 ZNF787Q6DD87 383 aa12□□□□□ -0.49
SNORA40.4-201ENST00000390971 AGBL1Q96MI9 1066 aa12□□□□□ -0.49
SNORA40.4-201ENST00000390971 C11orf95C9JLR9 678 aaPredicted RBP11.99□□□□□ -0.49
SNORA40.4-201ENST00000390971 PTGIRP43119 386 aa11.99□□□□□ -0.49
SNORA40.4-201ENST00000390971 RELBQ01201 579 aa11.99□□□□□ -0.49
SNORA40.4-201ENST00000390971 OXLD1Q5BKU9 147 aa11.99□□□□□ -0.49
SNORA40.4-201ENST00000390971 POTECB2RU33 542 aa11.98□□□□□ -0.49
SNORA40.4-201ENST00000390971 ATP5J2-PTCD1G3V325 749 aa11.98□□□□□ -0.49
SNORA40.4-201ENST00000390971 CYP2U1Q7Z449 544 aa11.98□□□□□ -0.49
SNORA40.4-201ENST00000390971 TRIM47Q96LD4 638 aa11.98□□□□□ -0.49
SNORA40.4-201ENST00000390971 UCN2Q96RP3 112 aa11.97□□□□□ -0.49
SNORA40.4-201ENST00000390971 OSBPL3Q9H4L5 887 aa11.97□□□□□ -0.49
SNORA40.4-201ENST00000390971 SPINT1O43278 529 aa11.96□□□□□ -0.49
SNORA40.4-201ENST00000390971 ATP9BO43861 1147 aa11.96□□□□□ -0.49
SNORA40.4-201ENST00000390971 TBC1D9Q6ZT07 1266 aa11.96□□□□□ -0.49
SNORA40.4-201ENST00000390971 KDF1Q8NAX2 398 aaPredicted RBP11.96□□□□□ -0.49
SNORA40.4-201ENST00000390971 EML3Q32P44 896 aa11.95□□□□□ -0.5
SNORA40.4-201ENST00000390971 ZNF395Q9H8N7 513 aaPredicted RBP11.95□□□□□ -0.5
SNORA40.4-201ENST00000390971 USP17L5A8MUK1 530 aa11.94□□□□□ -0.5
SNORA40.4-201ENST00000390971 GNRH1P01148 92 aa11.94□□□□□ -0.5
SNORA40.4-201ENST00000390971 TFIP11Q9UBB9 837 aaKnown RBP11.94□□□□□ -0.5
SNORA40.4-201ENST00000390971 NOD1Q9Y239 953 aa11.93□□□□□ -0.5
SNORA40.4-201ENST00000390971 SNRPBP14678 240 aaKnown RBP11.92□□□□□ -0.5
SNORA40.4-201ENST00000390971 NCOA4Q13772 614 aa11.92□□□□□ -0.5
SNORA40.4-201ENST00000390971 PLEKHM2Q8IWE5 1019 aa11.92□□□□□ -0.5
SNORA40.4-201ENST00000390971 PPP1R12CQ9BZL4 782 aa11.92□□□□□ -0.5
SNORA40.4-201ENST00000390971 SOS2Q07890 1332 aaPredicted RBP11.91□□□□□ -0.5
SNORA40.4-201ENST00000390971 A0A1W2PRU2 124 aa11.91□□□□□ -0.5
SNORA40.4-201ENST00000390971 PALM3A6NDB9 673 aaPredicted RBP11.91□□□□□ -0.5
SNORA40.4-201ENST00000390971 TTLL8A6PVC2 850 aa11.91□□□□□ -0.5
SNORA40.4-201ENST00000390971 DEPDC4Q8N2C3 294 aa11.91□□□□□ -0.5
SNORA40.4-201ENST00000390971 INSM2Q96T92 566 aaPredicted RBP11.91□□□□□ -0.5
SNORA40.4-201ENST00000390971 USP17L3A6NCW0 530 aa11.9□□□□□ -0.5
SNORA40.4-201ENST00000390971 USP17L4A6NCW7 530 aa11.9□□□□□ -0.5
SNORA40.4-201ENST00000390971 USP17L2Q6R6M4 530 aa11.9□□□□□ -0.5
SNORA40.4-201ENST00000390971 USP17L1Q7RTZ2 530 aa11.9□□□□□ -0.5
SNORA40.4-201ENST00000390971 MAN1A2O60476 641 aa11.89□□□□□ -0.51
SNORA40.4-201ENST00000390971 POLMQ9NP87 494 aaPredicted RBP11.89□□□□□ -0.51
SNORA40.4-201ENST00000390971 MEN1O00255 615 aa11.88□□□□□ -0.51
SNORA40.4-201ENST00000390971 CTSOP43234 321 aaPredicted RBP11.88□□□□□ -0.51
SNORA40.4-201ENST00000390971 CLN3Q13286 438 aa11.88□□□□□ -0.51
SNORA40.4-201ENST00000390971 ESCO1Q5FWF5 840 aa11.88□□□□□ -0.51
SNORA40.4-201ENST00000390971 TRIM50Q86XT4 487 aa11.88□□□□□ -0.51
SNORA40.4-201ENST00000390971 NLRP3Q96P20 1036 aa11.88□□□□□ -0.51
SNORA40.4-201ENST00000390971 MAFBQ9Y5Q3 323 aaPredicted RBP11.88□□□□□ -0.51
SNORA40.4-201ENST00000390971 ARHGEF10LQ9HCE6 1279 aa11.87□□□□□ -0.51
SNORA40.4-201ENST00000390971 GPC1P35052 558 aa11.86□□□□□ -0.51
SNORA40.4-201ENST00000390971 RNF144AP50876 292 aaPredicted RBP11.86□□□□□ -0.51
SNORA40.4-201ENST00000390971 PCDHGA11Q9Y5H2 935 aa11.86□□□□□ -0.51
SNORA40.4-201ENST00000390971 GTF2IP78347 998 aa11.85□□□□□ -0.51
SNORA40.4-201ENST00000390971 XAGE2Q96GT9 111 aa11.85□□□□□ -0.51
SNORA40.4-201ENST00000390971 ESYT1Q9BSJ8 1104 aa11.85□□□□□ -0.51
SNORA40.4-201ENST00000390971 MKRN1Q9UHC7 482 aaKnown RBP11.85□□□□□ -0.51
SNORA40.4-201ENST00000390971 ARID3CA6NKF2 412 aa11.84□□□□□ -0.51
SNORA40.4-201ENST00000390971 FIGNL2A6NMB9 653 aa11.84□□□□□ -0.51
SNORA40.4-201ENST00000390971 LMOD1P29536 600 aaPredicted RBP11.84□□□□□ -0.51
SNORA40.4-201ENST00000390971 ATP1A2P50993 1020 aa11.84□□□□□ -0.51
SNORA40.4-201ENST00000390971 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.84□□□□□ -0.51
SNORA40.4-201ENST00000390971 CNKSR1Q969H4 720 aa11.84□□□□□ -0.51
SNORA40.4-201ENST00000390971 RAB6BQ9NRW1 208 aa11.84□□□□□ -0.51
SNORA40.4-201ENST00000390971 DNMT3LQ9UJW3 386 aa11.84□□□□□ -0.51
SNORA40.4-201ENST00000390971 CCDC97Q96F63 343 aaPredicted RBP11.83□□□□□ -0.52
SNORA40.4-201ENST00000390971 SERPINA10Q9UK55 444 aa11.83□□□□□ -0.52
SNORA40.4-201ENST00000390971 TIMELESSQ9UNS1 1208 aa11.83□□□□□ -0.52
SNORA40.4-201ENST00000390971 IL2RAP01589 272 aa11.82□□□□□ -0.52
SNORA40.4-201ENST00000390971 PSME1Q06323 249 aa11.82□□□□□ -0.52
SNORA40.4-201ENST00000390971 FOXD4L5Q5VV16 416 aaPredicted RBP11.82□□□□□ -0.52
SNORA40.4-201ENST00000390971 RNF217Q8TC41 542 aa11.82□□□□□ -0.52
SNORA40.4-201ENST00000390971 ETNK1Q9HBU6 452 aa11.82□□□□□ -0.52
SNORA40.4-201ENST00000390971 SOBPA7XYQ1 873 aa11.81□□□□□ -0.52
SNORA40.4-201ENST00000390971 INHAP05111 366 aa11.81□□□□□ -0.52
SNORA40.4-201ENST00000390971 GDF10P55107 478 aa11.81□□□□□ -0.52
SNORA40.4-201ENST00000390971 CENPCQ03188 943 aa11.81□□□□□ -0.52
SNORA40.4-201ENST00000390971 SLC27A3Q5K4L6 730 aa11.81□□□□□ -0.52
SNORA40.4-201ENST00000390971 CFAP70Q5T0N1 1121 aa11.8□□□□□ -0.52
SNORA40.4-201ENST00000390971 LYSMD3Q7Z3D4 306 aa11.8□□□□□ -0.52
SNORA40.4-201ENST00000390971 GRIP2Q9C0E4 1043 aa11.8□□□□□ -0.52
SNORA40.4-201ENST00000390971 VRTNQ9H8Y1 702 aa11.8□□□□□ -0.52
SNORA40.4-201ENST00000390971 DNAAF2Q9NVR5 837 aaKnown RBP11.8□□□□□ -0.52
SNORA40.4-201ENST00000390971 WASLO00401 505 aaPredicted RBP11.79□□□□□ -0.52
SNORA40.4-201ENST00000390971 SCNN1DP51172 638 aa11.79□□□□□ -0.52
SNORA40.4-201ENST00000390971 LARGE2Q8N3Y3 721 aa11.79□□□□□ -0.52
SNORA40.4-201ENST00000390971 OGFOD1Q8N543 542 aa11.79□□□□□ -0.52
SNORA40.4-201ENST00000390971 HRH3Q9Y5N1 445 aa11.79□□□□□ -0.52
SNORA40.4-201ENST00000390971 ZBTB7BO15156 539 aaPredicted RBP11.78□□□□□ -0.52
SNORA40.4-201ENST00000390971 STAU1O95793 577 aaKnown RBP11.78□□□□□ -0.52
SNORA40.4-201ENST00000390971 RASA1P20936 1047 aa11.78□□□□□ -0.52
SNORA40.4-201ENST00000390971 KANK4Q5T7N3 995 aaPredicted RBP11.78□□□□□ -0.52
SNORA40.4-201ENST00000390971 GTF2E1P29083 439 aaPredicted RBP11.77□□□□□ -0.53
SNORA40.4-201ENST00000390971 CLDN10P78369 228 aa11.77□□□□□ -0.53
SNORA40.4-201ENST00000390971 LARP1Q6PKG0 1096 aaKnown RBP11.77□□□□□ -0.53
SNORA40.4-201ENST00000390971 PRICKLE2Q7Z3G6 844 aa11.77□□□□□ -0.53
SNORA40.4-201ENST00000390971 TMEM229AB2RXF0 380 aa11.76□□□□□ -0.53
SNORA40.4-201ENST00000390971 BACH1O14867 736 aa11.76□□□□□ -0.53
SNORA40.4-201ENST00000390971 RFX1P22670 979 aa11.76□□□□□ -0.53
SNORA40.4-201ENST00000390971 CCDC102BQ68D86 513 aa11.76□□□□□ -0.53
SNORA40.4-201ENST00000390971 SLC4A9Q96Q91 983 aa11.76□□□□□ -0.53
SNORA40.4-201ENST00000390971 ZSCAN10Q96SZ4 725 aaPredicted RBP11.76□□□□□ -0.53
SNORA40.4-201ENST00000390971 RBM19Q9Y4C8 960 aaKnown RBP11.76□□□□□ -0.53
SNORA40.4-201ENST00000390971 TPCN2Q8NHX9 752 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms