RNA–Protein interactions for RNA: ENST00000390426.2

TRAV4-201, Transcript of T cell receptor alpha variable 4, humanhuman

APPRIS P1 BASIC

Gene TRAV4, Length 395 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4-201ENST00000390426 POLR3GLQ9BT43 218 aa14.87□□□□□ -0.03
TRAV4-201ENST00000390426 RGPD2P0DJD1 1756 aa14.87□□□□□ -0.03
TRAV4-201ENST00000390426 CLSPNQ9HAW4 1339 aa14.87□□□□□ -0.03
TRAV4-201ENST00000390426 SMG6Q86US8 1419 aaKnown RBP14.86□□□□□ -0.03
TRAV4-201ENST00000390426 DCAF8L1A6NGE4 600 aa14.86□□□□□ -0.03
TRAV4-201ENST00000390426 TATP17735 454 aaPredicted RBP14.86□□□□□ -0.03
TRAV4-201ENST00000390426 KCNQ4P56696 695 aa14.86□□□□□ -0.03
TRAV4-201ENST00000390426 MTFR1LQ9H019 292 aa14.86□□□□□ -0.03
TRAV4-201ENST00000390426 EMILIN1Q9Y6C2 1016 aa14.86□□□□□ -0.03
TRAV4-201ENST00000390426 INSRP06213 1382 aa14.85□□□□□ -0.03
TRAV4-201ENST00000390426 SLC27A3Q5K4L6 730 aa14.85□□□□□ -0.03
TRAV4-201ENST00000390426 FLT4P35916 1363 aa14.85□□□□□ -0.03
TRAV4-201ENST00000390426 PPM1GO15355 546 aaPredicted RBP14.84□□□□□ -0.03
TRAV4-201ENST00000390426 AKT1S1Q96B36 256 aa14.84□□□□□ -0.03
TRAV4-201ENST00000390426 PAPPAQ13219 1627 aa14.84□□□□□ -0.03
TRAV4-201ENST00000390426 NSD2O96028 1365 aa14.84□□□□□ -0.03
TRAV4-201ENST00000390426 YY1P25490 414 aa14.83□□□□□ -0.04
TRAV4-201ENST00000390426 SGIP1Q9BQI5 828 aa14.83□□□□□ -0.04
TRAV4-201ENST00000390426 FHDC1Q9C0D6 1143 aaPredicted RBP14.83□□□□□ -0.04
TRAV4-201ENST00000390426 CGNL1Q0VF96 1302 aa14.83□□□□□ -0.04
TRAV4-201ENST00000390426 KIF20BQ96Q89 1820 aa14.82□□□□□ -0.04
TRAV4-201ENST00000390426 MYOM1P52179 1685 aa14.82□□□□□ -0.04
TRAV4-201ENST00000390426 KIF24Q5T7B8 1368 aa14.82□□□□□ -0.04
TRAV4-201ENST00000390426 DOT1LQ8TEK3 1739 aa14.81□□□□□ -0.04
TRAV4-201ENST00000390426 HSPA5P11021 654 aaKnown RBP14.81□□□□□ -0.04
TRAV4-201ENST00000390426 ARXQ96QS3 562 aa14.81□□□□□ -0.04
TRAV4-201ENST00000390426 SYT17Q9BSW7 474 aa14.81□□□□□ -0.04
TRAV4-201ENST00000390426 TFCP2L1Q9NZI6 479 aa14.81□□□□□ -0.04
TRAV4-201ENST00000390426 SHANK3Q9BYB0 1731 aa14.8□□□□□ -0.04
TRAV4-201ENST00000390426 ADRA2BP18089 450 aa14.8□□□□□ -0.04
TRAV4-201ENST00000390426 CCER1Q8TC90 406 aaPredicted RBP14.8□□□□□ -0.04
TRAV4-201ENST00000390426 CCNL1Q9UK58 526 aaPredicted RBP14.8□□□□□ -0.04
TRAV4-201ENST00000390426 EIF4G2P78344 907 aaKnown RBP eCLIP14.79□□□□□ -0.04
TRAV4-201ENST00000390426 PNPLA7Q6ZV29 1317 aa14.79□□□□□ -0.04
TRAV4-201ENST00000390426 PCDH11XQ9BZA7 1347 aa14.79□□□□□ -0.04
TRAV4-201ENST00000390426 PCDH11YQ9BZA8 1340 aa14.79□□□□□ -0.04
TRAV4-201ENST00000390426 WASHC2AQ641Q2 1341 aa14.78□□□□□ -0.04
TRAV4-201ENST00000390426 CYP27B1O15528 508 aa14.78□□□□□ -0.04
TRAV4-201ENST00000390426 TNNT2P45379 298 aaPredicted RBP14.78□□□□□ -0.04
TRAV4-201ENST00000390426 SLC16A10Q8TF71 515 aa14.78□□□□□ -0.04
TRAV4-201ENST00000390426 POLKQ9UBT6 870 aa14.78□□□□□ -0.04
TRAV4-201ENST00000390426 MSH5O43196 834 aa14.77□□□□□ -0.05
TRAV4-201ENST00000390426 MPRIPQ6WCQ1 1025 aa14.77□□□□□ -0.05
TRAV4-201ENST00000390426 EYA1Q99502 592 aa14.77□□□□□ -0.05
TRAV4-201ENST00000390426 KLHL34Q8N239 644 aa14.76□□□□□ -0.05
TRAV4-201ENST00000390426 POLD1P28340 1107 aa14.75□□□□□ -0.05
TRAV4-201ENST00000390426 PANK3Q9H999 370 aa14.75□□□□□ -0.05
TRAV4-201ENST00000390426 SPG7Q9UQ90 795 aa14.75□□□□□ -0.05
TRAV4-201ENST00000390426 COL23A1Q86Y22 540 aaPredicted RBP14.74□□□□□ -0.05
TRAV4-201ENST00000390426 LY75O60449 1722 aa14.74□□□□□ -0.05
TRAV4-201ENST00000390426 PALLDQ8WX93 1383 aa14.73□□□□□ -0.05
TRAV4-201ENST00000390426 EIF4A2Q14240 407 aaKnown RBP14.73□□□□□ -0.05
TRAV4-201ENST00000390426 NCAPD2Q15021 1401 aa14.73□□□□□ -0.05
TRAV4-201ENST00000390426 NKX1-1Q15270 411 aaPredicted RBP14.72□□□□□ -0.05
TRAV4-201ENST00000390426 PIGBQ92521 554 aa14.72□□□□□ -0.05
TRAV4-201ENST00000390426 MAP2P11137 1827 aaKnown RBP14.71□□□□□ -0.05
TRAV4-201ENST00000390426 MSL1Q68DK7 614 aa14.71□□□□□ -0.05
TRAV4-201ENST00000390426 SMARCC1Q92922 1105 aaPredicted RBP14.71□□□□□ -0.05
TRAV4-201ENST00000390426 QSER1Q2KHR3 1735 aa14.71□□□□□ -0.05
TRAV4-201ENST00000390426 MAP3K5Q99683 1374 aa14.71□□□□□ -0.06
TRAV4-201ENST00000390426 TUBGCP6Q96RT7 1819 aa14.71□□□□□ -0.06
TRAV4-201ENST00000390426 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.7□□□□□ -0.06
TRAV4-201ENST00000390426 PKD1L3Q7Z443 1732 aa14.69□□□□□ -0.06
TRAV4-201ENST00000390426 ANKRD26Q9UPS8 1709 aa14.69□□□□□ -0.06
TRAV4-201ENST00000390426 PHKG2P15735 406 aa14.69□□□□□ -0.06
TRAV4-201ENST00000390426 GPR162Q16538 588 aa14.69□□□□□ -0.06
TRAV4-201ENST00000390426 MORC1Q86VD1 984 aa14.69□□□□□ -0.06
TRAV4-201ENST00000390426 IFNL2Q8IZJ0 200 aa14.69□□□□□ -0.06
TRAV4-201ENST00000390426 PELP1Q8IZL8 1130 aaKnown RBP14.69□□□□□ -0.06
TRAV4-201ENST00000390426 TOGARAM1Q9Y4F4 1720 aa14.69□□□□□ -0.06
TRAV4-201ENST00000390426 SMIM5Q71RC9 77 aa14.68□□□□□ -0.06
TRAV4-201ENST00000390426 NLGN2Q8NFZ4 835 aa14.68□□□□□ -0.06
TRAV4-201ENST00000390426 TMOD3Q9NYL9 352 aa14.68□□□□□ -0.06
TRAV4-201ENST00000390426 HMGB2P26583 209 aaKnown RBP14.67□□□□□ -0.06
TRAV4-201ENST00000390426 FLAD1Q8NFF5 587 aa14.67□□□□□ -0.06
TRAV4-201ENST00000390426 AK7Q96M32 723 aa14.67□□□□□ -0.06
TRAV4-201ENST00000390426 ASAP1Q9ULH1 1129 aa14.67□□□□□ -0.06
TRAV4-201ENST00000390426 IGSF1Q8N6C5 1336 aa14.66□□□□□ -0.06
TRAV4-201ENST00000390426 LOC102724428A0A0B4J2F2 783 aa14.66□□□□□ -0.06
TRAV4-201ENST00000390426 PHF14O94880 888 aa14.66□□□□□ -0.06
TRAV4-201ENST00000390426 SIK1P57059 783 aa14.66□□□□□ -0.06
TRAV4-201ENST00000390426 AMIGO3Q86WK7 504 aa14.66□□□□□ -0.06
TRAV4-201ENST00000390426 KNSTRNQ9Y448 316 aa14.66□□□□□ -0.06
TRAV4-201ENST00000390426 ITGB4P16144 1822 aa14.66□□□□□ -0.06
TRAV4-201ENST00000390426 C5P01031 1676 aa14.65□□□□□ -0.06
TRAV4-201ENST00000390426 ZNF784Q8NCA9 323 aaPredicted RBP14.65□□□□□ -0.06
TRAV4-201ENST00000390426 ATG3Q9NT62 314 aa14.65□□□□□ -0.06
TRAV4-201ENST00000390426 COL24A1Q17RW2 1714 aa14.65□□□□□ -0.06
TRAV4-201ENST00000390426 PLEKHO1Q53GL0 409 aaPredicted RBP14.64□□□□□ -0.07
TRAV4-201ENST00000390426 LINC00116Q8NCU8 138 aa14.64□□□□□ -0.07
TRAV4-201ENST00000390426 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.63□□□□□ -0.07
TRAV4-201ENST00000390426 ATP6V1AP38606 617 aa14.63□□□□□ -0.07
TRAV4-201ENST00000390426 ITPK1Q13572 414 aa14.63□□□□□ -0.07
TRAV4-201ENST00000390426 ZNF530Q6P9A1 599 aaPredicted RBP14.63□□□□□ -0.07
TRAV4-201ENST00000390426 C4BP0C0L5 1744 aa14.63□□□□□ -0.07
TRAV4-201ENST00000390426 TAF1LQ8IZX4 1826 aa14.62□□□□□ -0.07
TRAV4-201ENST00000390426 AEBP1Q8IUX7 1158 aa14.62□□□□□ -0.07
TRAV4-201ENST00000390426 ERVV-2B6SEH9 535 aa14.61□□□□□ -0.07
TRAV4-201ENST00000390426 HSP90AB1P08238 724 aaKnown RBP14.61□□□□□ -0.07
TRAV4-201ENST00000390426 KIF7Q2M1P5 1343 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms